RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 Q8N2B8 174 aa6.13□□□□□ -1.43
LDB3-201ENST00000263066 CDKN2A-AS1Q9UH64 79 aa6.13□□□□□ -1.43
LDB3-201ENST00000263066 H0YGX0 51 aa6.12□□□□□ -1.43
LDB3-201ENST00000263066 ATP5EP2Q5VTU8 51 aa6.12□□□□□ -1.43
LDB3-201ENST00000263066 ANK2Q01484 3957 aa6.12□□□□□ -1.43
LDB3-201ENST00000263066 C18orf65Q6ZTR6 163 aa6.12□□□□□ -1.43
LDB3-201ENST00000263066 ATP5EP56381 51 aaPredicted RBP6.11□□□□□ -1.43
LDB3-201ENST00000263066 H7BZZ5 65 aa6.11□□□□□ -1.43
LDB3-201ENST00000263066 ESRGQ1W209 222 aa6.11□□□□□ -1.43
LDB3-201ENST00000263066 FAM222AQ5U5X8 452 aa6.11□□□□□ -1.43
LDB3-201ENST00000263066 FP248Q71RG6 208 aaPredicted RBP6.11□□□□□ -1.43
LDB3-201ENST00000263066 RHPN1-AS1Q9BWJ2 59 aa6.11□□□□□ -1.43
LDB3-201ENST00000263066 UBE2L6O14933 153 aa6.11□□□□□ -1.43
LDB3-201ENST00000263066 NANOS2P60321 138 aaKnown RBP6.11□□□□□ -1.43
LDB3-201ENST00000263066 FAM218AQ96MZ4 157 aa6.11□□□□□ -1.43
LDB3-201ENST00000263066 TENM4Q6N022 2769 aa6.1□□□□□ -1.43
LDB3-201ENST00000263066 NBEAL2Q6ZNJ1 2754 aa6.1□□□□□ -1.43
LDB3-201ENST00000263066 A0A0J9YX75 114 aa6.1□□□□□ -1.43
LDB3-201ENST00000263066 JMJD7-PLA2G4BH0Y9G9 81 aa6.1□□□□□ -1.43
LDB3-201ENST00000263066 SMAD5-AS1Q9Y6J3 95 aa6.1□□□□□ -1.43
LDB3-201ENST00000263066 A0A087WYN8 130 aa6.1□□□□□ -1.43
LDB3-201ENST00000263066 CTSGP08311 255 aa6.1□□□□□ -1.43
LDB3-201ENST00000263066 AMELXQ99217 191 aa6.1□□□□□ -1.43
LDB3-201ENST00000263066 ZNF561-AS1K7EIQ3 104 aa6.1□□□□□ -1.43
LDB3-201ENST00000263066 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.1□□□□□ -1.43
LDB3-201ENST00000263066 LY6LH3BQJ8 138 aa6.09□□□□□ -1.43
LDB3-201ENST00000263066 POLR2KP53803 58 aaKnown RBP6.09□□□□□ -1.43
LDB3-201ENST00000263066 DEFB131AP59861 70 aa6.09□□□□□ -1.43
LDB3-201ENST00000263066 PRR9Q5T870 116 aa6.09□□□□□ -1.43
LDB3-201ENST00000263066 C5orf56Q8N8D9 126 aa6.09□□□□□ -1.43
LDB3-201ENST00000263066 IGHV3-16A0A0C4DH30 117 aa6.09□□□□□ -1.43
LDB3-201ENST00000263066 PLAC8L1A1L4L8 177 aa6.09□□□□□ -1.43
LDB3-201ENST00000263066 GPHB5Q86YW7 130 aa6.08□□□□□ -1.44
LDB3-201ENST00000263066 COX7B2Q8TF08 81 aa6.08□□□□□ -1.44
LDB3-201ENST00000263066 CCL24O00175 119 aa6.08□□□□□ -1.44
LDB3-201ENST00000263066 APRG1Q8IVJ8 170 aa6.08□□□□□ -1.44
LDB3-201ENST00000263066 CHKB-CPT1BH3BT56 60 aa6.07□□□□□ -1.44
LDB3-201ENST00000263066 Q8N3U1 123 aa6.07□□□□□ -1.44
LDB3-201ENST00000263066 IGHV4OR15-8A0A075B7B6 117 aa6.07□□□□□ -1.44
LDB3-201ENST00000263066 A0A087WW49 117 aa6.07□□□□□ -1.44
LDB3-201ENST00000263066 C9orf47Q6ZRZ4 202 aa6.07□□□□□ -1.44
LDB3-201ENST00000263066 SMIM11BQ8TCY0 68 aa6.07□□□□□ -1.44
LDB3-201ENST00000263066 MUC4Q99102 2169 aa6.07□□□□□ -1.44
LDB3-201ENST00000263066 DEFB4AO15263 64 aa6.06□□□□□ -1.44
LDB3-201ENST00000263066 IGHV3-53P01767 116 aa6.06□□□□□ -1.44
LDB3-201ENST00000263066 UNQ9165/PRO28630Q6UXU0 137 aa6.06□□□□□ -1.44
LDB3-201ENST00000263066 IGHV4-4A0A075B6R2 117 aa6.06□□□□□ -1.44
LDB3-201ENST00000263066 CFHR3Q02985 330 aa6.06□□□□□ -1.44
LDB3-201ENST00000263066 TMEM254Q8TBM7 123 aa6.06□□□□□ -1.44
LDB3-201ENST00000263066 CMYA5Q8N3K9 4069 aa6.06□□□□□ -1.44
LDB3-201ENST00000263066 TRAV10A0A0B4J240 114 aa6.06□□□□□ -1.44
LDB3-201ENST00000263066 CLPSL1A2RUU4 121 aa6.06□□□□□ -1.44
LDB3-201ENST00000263066 NREPQ16612 68 aa6.06□□□□□ -1.44
LDB3-201ENST00000263066 CYSRT1A8MQ03 144 aa6.05□□□□□ -1.44
LDB3-201ENST00000263066 NDUFA1O15239 70 aa6.05□□□□□ -1.44
LDB3-201ENST00000263066 SPINK13Q1W4C9 94 aa6.05□□□□□ -1.44
LDB3-201ENST00000263066 LINC01006Q8NI28 216 aa6.05□□□□□ -1.44
LDB3-201ENST00000263066 TRBV10-1A0A0K0K1A3 114 aa6.05□□□□□ -1.44
LDB3-201ENST00000263066 Q6ZTI0 123 aa6.05□□□□□ -1.44
LDB3-201ENST00000263066 ESM1Q9NQ30 184 aa6.05□□□□□ -1.44
LDB3-201ENST00000263066 IGLV11-55A0A075B6I3 123 aa6.04□□□□□ -1.44
LDB3-201ENST00000263066 TMEM256-PLSCR3K7ERE1 68 aa6.04□□□□□ -1.44
LDB3-201ENST00000263066 RNASE3P12724 160 aaKnown RBP6.04□□□□□ -1.44
LDB3-201ENST00000263066 LYPD5Q6UWN5 251 aa6.04□□□□□ -1.44
LDB3-201ENST00000263066 Q6YL49 198 aa6.04□□□□□ -1.44
LDB3-201ENST00000263066 COX8CQ7Z4L0 72 aa6.04□□□□□ -1.44
LDB3-201ENST00000263066 RNF5Q99942 180 aa6.04□□□□□ -1.44
LDB3-201ENST00000263066 A6NDX4 124 aa6.04□□□□□ -1.44
LDB3-201ENST00000263066 DEFB130BP0DP73 79 aa6.04□□□□□ -1.44
LDB3-201ENST00000263066 DEFB130AP0DP74 79 aa6.04□□□□□ -1.44
LDB3-201ENST00000263066 C9orf129Q5T035 196 aaKnown RBP6.04□□□□□ -1.44
LDB3-201ENST00000263066 LITAFQ99732 161 aa6.04□□□□□ -1.44
LDB3-201ENST00000263066 ODF3BA8MYP8 253 aa6.03□□□□□ -1.44
LDB3-201ENST00000263066 LENEPQ9Y5L5 61 aa6.03□□□□□ -1.44
LDB3-201ENST00000263066 Q8N6K4 173 aa6.03□□□□□ -1.44
LDB3-201ENST00000263066 TM2D3Q9BRN9 247 aa6.03□□□□□ -1.44
LDB3-201ENST00000263066 A6NED7 52 aa6.03□□□□□ -1.44
LDB3-201ENST00000263066 APOC4P55056 127 aa6.03□□□□□ -1.44
LDB3-201ENST00000263066 ZFAND2AQ8N6M9 145 aa6.03□□□□□ -1.44
LDB3-201ENST00000263066 ZFAND3Q9H8U3 227 aa6.03□□□□□ -1.44
LDB3-201ENST00000263066 M0QY20 66 aa6.02□□□□□ -1.45
LDB3-201ENST00000263066 PRYO14603 147 aa6.02□□□□□ -1.45
LDB3-201ENST00000263066 WFDC10AQ9H1F0 79 aa6.02□□□□□ -1.45
LDB3-201ENST00000263066 H3BS24 57 aa6.02□□□□□ -1.45
LDB3-201ENST00000263066 UBE2BP63146 152 aa6.02□□□□□ -1.45
LDB3-201ENST00000263066 USMG5Q96IX5 58 aa6.02□□□□□ -1.45
LDB3-201ENST00000263066 BPY2O14599 106 aa6.02□□□□□ -1.45
LDB3-201ENST00000263066 KMT2BQ9UMN6 2715 aaPredicted RBP6.01□□□□□ -1.45
LDB3-201ENST00000263066 LINC01600Q96MT4 127 aa6.01□□□□□ -1.45
LDB3-201ENST00000263066 MXRA5Q9NR99 2828 aa6.01□□□□□ -1.45
LDB3-201ENST00000263066 TRGV2A0A075B6R0 118 aa6.01□□□□□ -1.45
LDB3-201ENST00000263066 FAM19A3Q7Z5A8 133 aa6.01□□□□□ -1.45
LDB3-201ENST00000263066 PROK1P58294 105 aa6□□□□□ -1.45
LDB3-201ENST00000263066 KLKP1Q107X0 134 aa6□□□□□ -1.45
LDB3-201ENST00000263066 RBM12B-AS1Q9P1G2 102 aa6□□□□□ -1.45
LDB3-201ENST00000263066 LINC00467Q9BRT7 94 aa6□□□□□ -1.45
LDB3-201ENST00000263066 CELA1Q9UNI1 258 aa6□□□□□ -1.45
LDB3-201ENST00000263066 LINC01547P58512 204 aaPredicted RBP6□□□□□ -1.45
LDB3-201ENST00000263066 A0A096LPF7 62 aa5.99□□□□□ -1.45
LDB3-201ENST00000263066 FAM229BQ4G0N7 80 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms