RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 HIGD2BQ4VC39 106 aa16■□□□□ 0.15
SCN1B-201ENST00000262631 GTF2H5Q6ZYL4 71 aa15.99■□□□□ 0.15
SCN1B-201ENST00000262631 VPS25Q9BRG1 176 aa15.99■□□□□ 0.15
SCN1B-201ENST00000262631 IGHV3-64A0A075B6Q5 118 aa15.99■□□□□ 0.15
SCN1B-201ENST00000262631 A6NDN8 102 aa15.99■□□□□ 0.15
SCN1B-201ENST00000262631 H3BRM9 83 aa15.99■□□□□ 0.15
SCN1B-201ENST00000262631 RNF151Q2KHN1 245 aa15.99■□□□□ 0.15
SCN1B-201ENST00000262631 LINC01561Q8N1V8 128 aa15.99■□□□□ 0.15
SCN1B-201ENST00000262631 LINC00526Q96FQ7 95 aa15.99■□□□□ 0.15
SCN1B-201ENST00000262631 DNAH11Q96DT5 4516 aa15.97■□□□□ 0.15
SCN1B-201ENST00000262631 TMEM223A0PJW6 202 aa15.97■□□□□ 0.15
SCN1B-201ENST00000262631 APOMO95445 188 aa15.97■□□□□ 0.15
SCN1B-201ENST00000262631 CFAP161Q6P656 301 aa15.97■□□□□ 0.15
SCN1B-201ENST00000262631 GVQW2A0A096LPI5 108 aaPredicted RBP15.96■□□□□ 0.15
SCN1B-201ENST00000262631 C2orf91Q6ZV80 131 aa15.96■□□□□ 0.15
SCN1B-201ENST00000262631 Q8N814 137 aa15.95■□□□□ 0.14
SCN1B-201ENST00000262631 SPAG11BQ08648 103 aa15.94■□□□□ 0.14
SCN1B-201ENST00000262631 LINC00336Q6ZUF6 198 aa15.94■□□□□ 0.14
SCN1B-201ENST00000262631 IGLV5-39A0A0G2JS06 123 aa15.93■□□□□ 0.14
SCN1B-201ENST00000262631 HSD52Q0P140 79 aa15.93■□□□□ 0.14
SCN1B-201ENST00000262631 KIAA0087Q14695 138 aa15.93■□□□□ 0.14
SCN1B-201ENST00000262631 TOMM7Q9P0U1 55 aa15.93■□□□□ 0.14
SCN1B-201ENST00000262631 PKD1P98161 4303 aa15.93■□□□□ 0.14
SCN1B-201ENST00000262631 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.92■□□□□ 0.14
SCN1B-201ENST00000262631 C9orf118A6NHY6 69 aa15.92■□□□□ 0.14
SCN1B-201ENST00000262631 SLPIP03973 132 aa15.92■□□□□ 0.14
SCN1B-201ENST00000262631 FUSP35637 526 aaKnown RBP eCLIP15.92■□□□□ 0.14
SCN1B-201ENST00000262631 GAGE10A6NGK3 116 aa15.91■□□□□ 0.14
SCN1B-201ENST00000262631 ZNF561-AS1K7EIQ3 104 aa15.91■□□□□ 0.14
SCN1B-201ENST00000262631 C14orf177Q52M58 125 aa15.91■□□□□ 0.14
SCN1B-201ENST00000262631 HECTD4Q9Y4D8 3996 aa15.9■□□□□ 0.14
SCN1B-201ENST00000262631 BOD1L2Q8IYS8 172 aa15.9■□□□□ 0.14
SCN1B-201ENST00000262631 Q8IZM0 81 aa15.89■□□□□ 0.13
SCN1B-201ENST00000262631 COX7B2Q8TF08 81 aa15.89■□□□□ 0.13
SCN1B-201ENST00000262631 NTN5Q8WTR8 489 aaPredicted RBP15.89■□□□□ 0.13
SCN1B-201ENST00000262631 TP73-AS1Q9UF72 201 aa15.88■□□□□ 0.13
SCN1B-201ENST00000262631 K7EP34 96 aa15.87■□□□□ 0.13
SCN1B-201ENST00000262631 PRSS2P07478 247 aa15.87■□□□□ 0.13
SCN1B-201ENST00000262631 C2orf82Q6UX34 121 aa15.87■□□□□ 0.13
SCN1B-201ENST00000262631 TSPEAR-AS2P59090 65 aa15.86■□□□□ 0.13
SCN1B-201ENST00000262631 KRTAP10-2P60368 255 aa15.86■□□□□ 0.13
SCN1B-201ENST00000262631 C6orf226Q5I0X4 101 aa15.86■□□□□ 0.13
SCN1B-201ENST00000262631 HERVK_113P61574 105 aa15.86■□□□□ 0.13
SCN1B-201ENST00000262631 A0A1B0GVY2 172 aa15.84■□□□□ 0.13
SCN1B-201ENST00000262631 E9PLD3 99 aa15.84■□□□□ 0.13
SCN1B-201ENST00000262631 C10orf25Q5T742 122 aa15.84■□□□□ 0.13
SCN1B-201ENST00000262631 C2orf48Q96LS8 159 aa15.84■□□□□ 0.13
SCN1B-201ENST00000262631 IGKV2D-26A0A0A0MRZ7 120 aa15.83■□□□□ 0.13
SCN1B-201ENST00000262631 UNQ6190/PRO20217Q6UXQ8 127 aa15.83■□□□□ 0.13
SCN1B-201ENST00000262631 CAMK2N2Q96S95 79 aa15.83■□□□□ 0.13
SCN1B-201ENST00000262631 LEPROTO15243 131 aa15.83■□□□□ 0.12
SCN1B-201ENST00000262631 CNBPP62633 177 aaKnown RBP15.83■□□□□ 0.12
SCN1B-201ENST00000262631 Q6ZRU5 148 aa15.83■□□□□ 0.12
SCN1B-201ENST00000262631 CKS1BP61024 79 aa15.82■□□□□ 0.12
SCN1B-201ENST00000262631 DNAH5Q8TE73 4624 aa15.82■□□□□ 0.12
SCN1B-201ENST00000262631 HIGD1BQ9P298 99 aa15.81■□□□□ 0.12
SCN1B-201ENST00000262631 J3QQQ9 107 aa15.8■□□□□ 0.12
SCN1B-201ENST00000262631 SYCNQ0VAF6 134 aa15.8■□□□□ 0.12
SCN1B-201ENST00000262631 PLEKHB2Q96CS7 222 aa15.79■□□□□ 0.12
SCN1B-201ENST00000262631 NDUFA1O15239 70 aa15.79■□□□□ 0.12
SCN1B-201ENST00000262631 LINC01620Q4KN68 170 aa15.79■□□□□ 0.12
SCN1B-201ENST00000262631 CARD19Q96LW7 228 aa15.79■□□□□ 0.12
SCN1B-201ENST00000262631 PKHD1P08F94 4074 aa15.79■□□□□ 0.12
SCN1B-201ENST00000262631 ZNF625Q96I27 306 aaPredicted RBP15.78■□□□□ 0.12
SCN1B-201ENST00000262631 IGLV5-52A0A0A0MRZ9 124 aa15.77■□□□□ 0.12
SCN1B-201ENST00000262631 CXCL5P42830 114 aa15.77■□□□□ 0.12
SCN1B-201ENST00000262631 TTTY13Q9BZ97 58 aa15.77■□□□□ 0.12
SCN1B-201ENST00000262631 C6orf48Q9UBA6 75 aa15.77■□□□□ 0.12
SCN1B-201ENST00000262631 A0A1W2PPM0 123 aa15.76■□□□□ 0.11
SCN1B-201ENST00000262631 F8WDY8 70 aa15.76■□□□□ 0.11
SCN1B-201ENST00000262631 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.76■□□□□ 0.11
SCN1B-201ENST00000262631 H3BUT2 72 aa15.76■□□□□ 0.11
SCN1B-201ENST00000262631 NMUP48645 174 aa15.76■□□□□ 0.11
SCN1B-201ENST00000262631 NDUFA12Q9UI09 145 aa15.76■□□□□ 0.11
SCN1B-201ENST00000262631 FABP2P12104 132 aa15.75■□□□□ 0.11
SCN1B-201ENST00000262631 LGALS3P17931 250 aaKnown RBP15.75■□□□□ 0.11
SCN1B-201ENST00000262631 C9orf116Q5BN46 136 aaPredicted RBP15.75■□□□□ 0.11
SCN1B-201ENST00000262631 PGPEP1Q9NXJ5 209 aa15.75■□□□□ 0.11
SCN1B-201ENST00000262631 C9orf163Q8N9P6 203 aa15.74■□□□□ 0.11
SCN1B-201ENST00000262631 SMIM13P0DJ93 91 aa15.73■□□□□ 0.11
SCN1B-201ENST00000262631 SPCS1Q9Y6A9 102 aa15.73■□□□□ 0.11
SCN1B-201ENST00000262631 TRBV30A0A0K0K1B3 111 aa15.71■□□□□ 0.11
SCN1B-201ENST00000262631 PCP2Q8IVA1 136 aa15.71■□□□□ 0.11
SCN1B-201ENST00000262631 MYMXA0A1B0GTQ4 84 aa15.69■□□□□ 0.1
SCN1B-201ENST00000262631 TMEM238C9JI98 176 aa15.69■□□□□ 0.1
SCN1B-201ENST00000262631 SCGB1A1P11684 91 aa15.69■□□□□ 0.1
SCN1B-201ENST00000262631 TAL2Q16559 108 aa15.67■□□□□ 0.1
SCN1B-201ENST00000262631 SFTA2Q6UW10 78 aa15.67■□□□□ 0.1
SCN1B-201ENST00000262631 ZNF815PA8K554 130 aa15.67■□□□□ 0.1
SCN1B-201ENST00000262631 SDIM1Q6ZPB5 146 aa15.67■□□□□ 0.1
SCN1B-201ENST00000262631 GCSHP23434 173 aa15.65■□□□□ 0.1
SCN1B-201ENST00000262631 HERV-K104P63124 156 aa15.65■□□□□ 0.1
SCN1B-201ENST00000262631 ERG28Q9UKR5 140 aa15.65■□□□□ 0.1
SCN1B-201ENST00000262631 EPPK1P58107 5090 aaKnown RBP15.65■□□□□ 0.1
SCN1B-201ENST00000262631 DYNC1H1Q14204 4646 aaKnown RBP15.64■□□□□ 0.09
SCN1B-201ENST00000262631 PFN2P35080 140 aa15.63■□□□□ 0.09
SCN1B-201ENST00000262631 LRP1BQ9NZR2 4599 aa15.63■□□□□ 0.09
SCN1B-201ENST00000262631 J3QR89 54 aa15.63■□□□□ 0.09
SCN1B-201ENST00000262631 KRTAP10-1P60331 282 aa15.63■□□□□ 0.09
SCN1B-201ENST00000262631 Q6ZRP5 223 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms