RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 RPL37AP61513 92 aaKnown RBP9.5□□□□□ -0.89
PDGFRB-201ENST00000261799 GAS8-AS1O95177 125 aa9.5□□□□□ -0.89
PDGFRB-201ENST00000261799 PRLHP81277 87 aa9.5□□□□□ -0.89
PDGFRB-201ENST00000261799 SMCR5Q8TEV8 140 aa9.5□□□□□ -0.89
PDGFRB-201ENST00000261799 PLCE1Q9P212 2302 aa9.5□□□□□ -0.89
PDGFRB-201ENST00000261799 FAM30AQ9NZY2 134 aa9.49□□□□□ -0.89
PDGFRB-201ENST00000261799 AMELXQ99217 191 aa9.48□□□□□ -0.89
PDGFRB-201ENST00000261799 KIF25-AS1Q9Y6Z4 181 aa9.48□□□□□ -0.89
PDGFRB-201ENST00000261799 ATG2AQ2TAZ0 1938 aa9.47□□□□□ -0.89
PDGFRB-201ENST00000261799 C11orf72Q8NBR9 251 aa9.47□□□□□ -0.89
PDGFRB-201ENST00000261799 B5MCH6 92 aa9.47□□□□□ -0.89
PDGFRB-201ENST00000261799 SPACA4Q8TDM5 124 aa9.47□□□□□ -0.89
PDGFRB-201ENST00000261799 NTM-AS1Q6ZSK4 140 aa9.47□□□□□ -0.89
PDGFRB-201ENST00000261799 COX8CQ7Z4L0 72 aa9.46□□□□□ -0.89
PDGFRB-201ENST00000261799 TYMSOSQ8TAI1 123 aa9.46□□□□□ -0.89
PDGFRB-201ENST00000261799 CRYGAP11844 174 aa9.46□□□□□ -0.9
PDGFRB-201ENST00000261799 PRR3P79522 188 aaKnown RBP9.46□□□□□ -0.9
PDGFRB-201ENST00000261799 C20orf197Q8N268 126 aa9.45□□□□□ -0.9
PDGFRB-201ENST00000261799 V9GYY9 64 aa9.45□□□□□ -0.9
PDGFRB-201ENST00000261799 NAV2Q8IVL1 2488 aa9.44□□□□□ -0.9
PDGFRB-201ENST00000261799 TNCP24821 2201 aa9.44□□□□□ -0.9
PDGFRB-201ENST00000261799 LINC00588Q9Y4M8 146 aa9.44□□□□□ -0.9
PDGFRB-201ENST00000261799 ATP5EP56381 51 aaPredicted RBP9.43□□□□□ -0.9
PDGFRB-201ENST00000261799 EXPH5Q8NEV8 1989 aa9.43□□□□□ -0.9
PDGFRB-201ENST00000261799 MYO18BQ8IUG5 2567 aa9.43□□□□□ -0.9
PDGFRB-201ENST00000261799 A0A087WSZ3 146 aa9.42□□□□□ -0.9
PDGFRB-201ENST00000261799 SERP2Q8N6R1 65 aa9.42□□□□□ -0.9
PDGFRB-201ENST00000261799 NDUFC1O43677 76 aa9.42□□□□□ -0.9
PDGFRB-201ENST00000261799 Q8NAQ8 132 aa9.41□□□□□ -0.9
PDGFRB-201ENST00000261799 MOBPQ13875 183 aa9.41□□□□□ -0.9
PDGFRB-201ENST00000261799 TANC2Q9HCD6 1990 aa9.41□□□□□ -0.9
PDGFRB-201ENST00000261799 K7EIL1 84 aa9.41□□□□□ -0.9
PDGFRB-201ENST00000261799 NCOR2Q9Y618 2525 aa9.4□□□□□ -0.91
PDGFRB-201ENST00000261799 LINC00336Q6ZUF6 198 aa9.39□□□□□ -0.91
PDGFRB-201ENST00000261799 NAV3Q8IVL0 2385 aa9.38□□□□□ -0.91
PDGFRB-201ENST00000261799 A0A087WYN8 130 aa9.38□□□□□ -0.91
PDGFRB-201ENST00000261799 SVIPQ8NHG7 77 aa9.38□□□□□ -0.91
PDGFRB-201ENST00000261799 PHF5AQ7RTV0 110 aaKnown RBP9.38□□□□□ -0.91
PDGFRB-201ENST00000261799 KRTAP10-11P60412 298 aa9.37□□□□□ -0.91
PDGFRB-201ENST00000261799 LINC00167Q96N53 147 aa9.37□□□□□ -0.91
PDGFRB-201ENST00000261799 HIVEP3Q5T1R4 2406 aa9.37□□□□□ -0.91
PDGFRB-201ENST00000261799 PRR4Q16378 134 aa9.37□□□□□ -0.91
PDGFRB-201ENST00000261799 Q8NBF4 154 aa9.37□□□□□ -0.91
PDGFRB-201ENST00000261799 MPLKIPQ8TAP9 179 aa9.37□□□□□ -0.91
PDGFRB-201ENST00000261799 CCDC168Q8NDH2 2452 aa9.36□□□□□ -0.91
PDGFRB-201ENST00000261799 UQCRQO14949 82 aa9.36□□□□□ -0.91
PDGFRB-201ENST00000261799 LINC01547P58512 204 aaPredicted RBP9.36□□□□□ -0.91
PDGFRB-201ENST00000261799 EML5Q05BV3 1969 aa9.35□□□□□ -0.91
PDGFRB-201ENST00000261799 LINC00575Q6W349 94 aa9.35□□□□□ -0.91
PDGFRB-201ENST00000261799 SPINK1P00995 79 aa9.35□□□□□ -0.91
PDGFRB-201ENST00000261799 CHTF8P0CG12 524 aa9.34□□□□□ -0.91
PDGFRB-201ENST00000261799 FAM19A4Q96LR4 140 aa9.34□□□□□ -0.91
PDGFRB-201ENST00000261799 TRBV7-6A0A0J9YX20 115 aa9.33□□□□□ -0.92
PDGFRB-201ENST00000261799 HCG22E2RYF7 251 aa9.33□□□□□ -0.92
PDGFRB-201ENST00000261799 SNURFQ9Y675 71 aa9.33□□□□□ -0.92
PDGFRB-201ENST00000261799 LINC00208Q96KT6 92 aa9.33□□□□□ -0.92
PDGFRB-201ENST00000261799 C6orf48Q9UBA6 75 aa9.33□□□□□ -0.92
PDGFRB-201ENST00000261799 ATP11AUNQ6ZP68 121 aa9.32□□□□□ -0.92
PDGFRB-201ENST00000261799 PTPRBP23467 1997 aa9.32□□□□□ -0.92
PDGFRB-201ENST00000261799 IGKV2D-30A0A075B6S6 120 aa9.31□□□□□ -0.92
PDGFRB-201ENST00000261799 IGKV2-30P06310 120 aa9.31□□□□□ -0.92
PDGFRB-201ENST00000261799 TSPEAR-AS2P59090 65 aa9.31□□□□□ -0.92
PDGFRB-201ENST00000261799 DEFB116Q30KQ4 102 aa9.31□□□□□ -0.92
PDGFRB-201ENST00000261799 COX6B2Q6YFQ2 88 aa9.31□□□□□ -0.92
PDGFRB-201ENST00000261799 DNAH10OSP0CZ25 163 aa9.31□□□□□ -0.92
PDGFRB-201ENST00000261799 WNK1Q9H4A3 2382 aa9.31□□□□□ -0.92
PDGFRB-201ENST00000261799 SORL1Q92673 2214 aa9.31□□□□□ -0.92
PDGFRB-201ENST00000261799 ADAMTSL4-AS1Q5T5F5 129 aa9.3□□□□□ -0.92
PDGFRB-201ENST00000261799 BRK1Q8WUW1 75 aa9.3□□□□□ -0.92
PDGFRB-201ENST00000261799 C7orf65Q6ZTY9 151 aa9.3□□□□□ -0.92
PDGFRB-201ENST00000261799 IMUPQ9GZP8 106 aa9.3□□□□□ -0.92
PDGFRB-201ENST00000261799 ARHGAP32A7KAX9 2087 aa9.29□□□□□ -0.92
PDGFRB-201ENST00000261799 BCE1O60756 84 aa9.29□□□□□ -0.92
PDGFRB-201ENST00000261799 GVQW2A0A096LPI5 108 aaPredicted RBP9.29□□□□□ -0.92
PDGFRB-201ENST00000261799 H0Y9P7 68 aa9.29□□□□□ -0.92
PDGFRB-201ENST00000261799 C19orf73Q9NVV2 129 aa9.29□□□□□ -0.92
PDGFRB-201ENST00000261799 hDV103S1A0JD37 113 aa9.28□□□□□ -0.92
PDGFRB-201ENST00000261799 EPM2AB3EWF7 344 aa9.28□□□□□ -0.92
PDGFRB-201ENST00000261799 PCOTHQ58A44 107 aa9.28□□□□□ -0.92
PDGFRB-201ENST00000261799 C2orf91Q6ZV80 131 aa9.28□□□□□ -0.92
PDGFRB-201ENST00000261799 MT-ATP8P03928 68 aa9.28□□□□□ -0.92
PDGFRB-201ENST00000261799 KIAA0087Q14695 138 aa9.28□□□□□ -0.92
PDGFRB-201ENST00000261799 PRR14LQ5THK1 2151 aa9.27□□□□□ -0.93
PDGFRB-201ENST00000261799 HCFC1P51610 2035 aa9.27□□□□□ -0.93
PDGFRB-201ENST00000261799 YPEL4Q96NS1 127 aa9.27□□□□□ -0.93
PDGFRB-201ENST00000261799 FAM240AA0A1B0GVK7 77 aa9.27□□□□□ -0.93
PDGFRB-201ENST00000261799 A6NED7 52 aa9.26□□□□□ -0.93
PDGFRB-201ENST00000261799 COL27A1Q8IZC6 1860 aaPredicted RBP9.26□□□□□ -0.93
PDGFRB-201ENST00000261799 A8MTW9 85 aa9.25□□□□□ -0.93
PDGFRB-201ENST00000261799 LINC00313P59037 77 aa9.25□□□□□ -0.93
PDGFRB-201ENST00000261799 IGHV3OR16-9A0A0B4J2B5 98 aa9.24□□□□□ -0.93
PDGFRB-201ENST00000261799 IGF2RP11717 2491 aa9.24□□□□□ -0.93
PDGFRB-201ENST00000261799 IGLV5-39A0A0G2JS06 123 aa9.23□□□□□ -0.93
PDGFRB-201ENST00000261799 ABCA2Q9BZC7 2435 aa9.23□□□□□ -0.93
PDGFRB-201ENST00000261799 DSCAML1Q8TD84 2053 aa9.22□□□□□ -0.93
PDGFRB-201ENST00000261799 KRTAP10-3P60369 221 aa9.22□□□□□ -0.93
PDGFRB-201ENST00000261799 TM2D3Q9BRN9 247 aa9.22□□□□□ -0.93
PDGFRB-201ENST00000261799 TRAV7A0A075B6U4 112 aa9.21□□□□□ -0.93
PDGFRB-201ENST00000261799 Q96NJ1 140 aa9.21□□□□□ -0.93
PDGFRB-201ENST00000261799 DOPEY1Q5JWR5 2465 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms