RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 EML5Q05BV3 1969 aa7.67□□□□□ -1.18
SLC6A4-201ENST00000261707 PCNX3Q9H6A9 2034 aa7.67□□□□□ -1.18
SLC6A4-201ENST00000261707 A8MTW9 85 aa7.67□□□□□ -1.18
SLC6A4-201ENST00000261707 C8orf87E5RJ46 101 aa7.66□□□□□ -1.18
SLC6A4-201ENST00000261707 KRTAP10-9P60411 292 aa7.66□□□□□ -1.18
SLC6A4-201ENST00000261707 Q9BRP9 147 aa7.66□□□□□ -1.18
SLC6A4-201ENST00000261707 C2orf16Q68DN1 1984 aa7.66□□□□□ -1.18
SLC6A4-201ENST00000261707 MDFIQ99750 246 aa7.66□□□□□ -1.18
SLC6A4-201ENST00000261707 WWC2-AS2Q96NR7 200 aa7.65□□□□□ -1.18
SLC6A4-201ENST00000261707 MED12LQ86YW9 2145 aa7.65□□□□□ -1.18
SLC6A4-201ENST00000261707 NOTCH3Q9UM47 2321 aa7.65□□□□□ -1.18
SLC6A4-201ENST00000261707 SPATA3Q8NHX4 192 aa7.65□□□□□ -1.18
SLC6A4-201ENST00000261707 NOTCH4Q99466 2003 aa7.65□□□□□ -1.19
SLC6A4-201ENST00000261707 PCNX1Q96RV3 2341 aa7.64□□□□□ -1.19
SLC6A4-201ENST00000261707 IGLV1-40P01703 118 aa7.64□□□□□ -1.19
SLC6A4-201ENST00000261707 FHL2Q14192 279 aa7.64□□□□□ -1.19
SLC6A4-201ENST00000261707 Q6ZTC4 211 aa7.63□□□□□ -1.19
SLC6A4-201ENST00000261707 C6orf223Q8N319 242 aa7.63□□□□□ -1.19
SLC6A4-201ENST00000261707 FREM1Q5H8C1 2179 aa7.63□□□□□ -1.19
SLC6A4-201ENST00000261707 LINC01561Q8N1V8 128 aa7.62□□□□□ -1.19
SLC6A4-201ENST00000261707 Q6ZSN1 163 aa7.62□□□□□ -1.19
SLC6A4-201ENST00000261707 Q8N2B8 174 aa7.62□□□□□ -1.19
SLC6A4-201ENST00000261707 FAM218AQ96MZ4 157 aa7.62□□□□□ -1.19
SLC6A4-201ENST00000261707 SPTAN1Q13813 2472 aaKnown RBP7.61□□□□□ -1.19
SLC6A4-201ENST00000261707 SRCAPQ6ZRS2 3230 aa7.61□□□□□ -1.19
SLC6A4-201ENST00000261707 TM2D3Q9BRN9 247 aa7.61□□□□□ -1.19
SLC6A4-201ENST00000261707 TNCP24821 2201 aa7.6□□□□□ -1.19
SLC6A4-201ENST00000261707 ARHGAP32A7KAX9 2087 aa7.6□□□□□ -1.19
SLC6A4-201ENST00000261707 CD164Q04900 197 aa7.6□□□□□ -1.19
SLC6A4-201ENST00000261707 C11orf71Q6IPW1 123 aa7.59□□□□□ -1.19
SLC6A4-201ENST00000261707 SPACA4Q8TDM5 124 aa7.59□□□□□ -1.19
SLC6A4-201ENST00000261707 ACYP2P14621 99 aa7.59□□□□□ -1.19
SLC6A4-201ENST00000261707 PTPRQQ9UMZ3 2332 aa7.59□□□□□ -1.19
SLC6A4-201ENST00000261707 SPINT4Q6UDR6 99 aa7.59□□□□□ -1.19
SLC6A4-201ENST00000261707 DSCAMO60469 2012 aa7.59□□□□□ -1.2
SLC6A4-201ENST00000261707 SMCR5Q8TEV8 140 aa7.58□□□□□ -1.2
SLC6A4-201ENST00000261707 IGLV5-39A0A0G2JS06 123 aa7.58□□□□□ -1.2
SLC6A4-201ENST00000261707 F8WDY8 70 aa7.58□□□□□ -1.2
SLC6A4-201ENST00000261707 ATP11AUNQ6ZP68 121 aa7.58□□□□□ -1.2
SLC6A4-201ENST00000261707 Q6ZQT0 140 aa7.58□□□□□ -1.2
SLC6A4-201ENST00000261707 PLXNB1O43157 2135 aa7.58□□□□□ -1.2
SLC6A4-201ENST00000261707 KIAA0087Q14695 138 aa7.57□□□□□ -1.2
SLC6A4-201ENST00000261707 GVINP1Q7Z2Y8 2422 aa7.57□□□□□ -1.2
SLC6A4-201ENST00000261707 C7orf65Q6ZTY9 151 aa7.57□□□□□ -1.2
SLC6A4-201ENST00000261707 RIF1Q5UIP0 2472 aaKnown RBP7.56□□□□□ -1.2
SLC6A4-201ENST00000261707 LINC00336Q6ZUF6 198 aa7.56□□□□□ -1.2
SLC6A4-201ENST00000261707 LOC110117498A0A087WWA1 95 aa7.56□□□□□ -1.2
SLC6A4-201ENST00000261707 PRLHP81277 87 aa7.56□□□□□ -1.2
SLC6A4-201ENST00000261707 FHL3Q13643 280 aa7.56□□□□□ -1.2
SLC6A4-201ENST00000261707 TP53AIP1Q9HCN2 124 aa7.55□□□□□ -1.2
SLC6A4-201ENST00000261707 H3BPC8 53 aa7.55□□□□□ -1.2
SLC6A4-201ENST00000261707 C16orf95Q9H693 158 aa7.55□□□□□ -1.2
SLC6A4-201ENST00000261707 A8MUN3 132 aa7.55□□□□□ -1.2
SLC6A4-201ENST00000261707 C6orf48Q9UBA6 75 aa7.55□□□□□ -1.2
SLC6A4-201ENST00000261707 MUC6Q6W4X9 2439 aa7.55□□□□□ -1.2
SLC6A4-201ENST00000261707 A0A1B0GUV1 79 aa7.55□□□□□ -1.2
SLC6A4-201ENST00000261707 OTOGLQ3ZCN5 2332 aa7.55□□□□□ -1.2
SLC6A4-201ENST00000261707 COL5A1P20908 1838 aaPredicted RBP7.55□□□□□ -1.2
SLC6A4-201ENST00000261707 RPL37AP61513 92 aaKnown RBP7.54□□□□□ -1.2
SLC6A4-201ENST00000261707 KIF25-AS1Q9Y6Z4 181 aa7.54□□□□□ -1.2
SLC6A4-201ENST00000261707 ODF3L2Q3SX64 289 aa7.54□□□□□ -1.2
SLC6A4-201ENST00000261707 TYMSOSQ8TAI1 123 aa7.54□□□□□ -1.2
SLC6A4-201ENST00000261707 CYP4F30PQ9H0H9 118 aa7.53□□□□□ -1.2
SLC6A4-201ENST00000261707 C11orf72Q8NBR9 251 aa7.52□□□□□ -1.21
SLC6A4-201ENST00000261707 PRR14LQ5THK1 2151 aa7.52□□□□□ -1.21
SLC6A4-201ENST00000261707 IGKV2D-30A0A075B6S6 120 aa7.51□□□□□ -1.21
SLC6A4-201ENST00000261707 IGKV2-30P06310 120 aa7.51□□□□□ -1.21
SLC6A4-201ENST00000261707 EP400Q96L91 3159 aa7.51□□□□□ -1.21
SLC6A4-201ENST00000261707 CACNA1HO95180 2353 aa7.51□□□□□ -1.21
SLC6A4-201ENST00000261707 Q6ZRU5 148 aa7.51□□□□□ -1.21
SLC6A4-201ENST00000261707 A0A1B0GW54 56 aa7.5□□□□□ -1.21
SLC6A4-201ENST00000261707 ERC2-IT1O76042 136 aa7.5□□□□□ -1.21
SLC6A4-201ENST00000261707 KTN1-AS1Q86SY8 53 aa7.5□□□□□ -1.21
SLC6A4-201ENST00000261707 IGLV5-45A0A087WSX0 123 aa7.48□□□□□ -1.21
SLC6A4-201ENST00000261707 PRO3102Q9H379 93 aa7.48□□□□□ -1.21
SLC6A4-201ENST00000261707 ELOF1P60002 83 aaKnown RBP7.47□□□□□ -1.21
SLC6A4-201ENST00000261707 EXPH5Q8NEV8 1989 aa7.47□□□□□ -1.21
SLC6A4-201ENST00000261707 IGLV8-61A0A075B6I0 122 aa7.47□□□□□ -1.21
SLC6A4-201ENST00000261707 RTL8CO15255 209 aa7.47□□□□□ -1.21
SLC6A4-201ENST00000261707 CEP192Q8TEP8 1941 aa7.47□□□□□ -1.21
SLC6A4-201ENST00000261707 TRAV22A0A0B4J277 110 aa7.47□□□□□ -1.21
SLC6A4-201ENST00000261707 COA5Q86WW8 74 aa7.47□□□□□ -1.21
SLC6A4-201ENST00000261707 COL4A4P53420 1690 aaPredicted RBP7.47□□□□□ -1.21
SLC6A4-201ENST00000261707 LINC00315P59091 139 aa7.47□□□□□ -1.21
SLC6A4-201ENST00000261707 C22orf24Q9Y442 160 aa7.47□□□□□ -1.21
SLC6A4-201ENST00000261707 IGLV1-51P01701 117 aa7.46□□□□□ -1.21
SLC6A4-201ENST00000261707 KRTAP24-1Q3LI83 254 aa7.46□□□□□ -1.22
SLC6A4-201ENST00000261707 IGHV3OR16-9A0A0B4J2B5 98 aa7.45□□□□□ -1.22
SLC6A4-201ENST00000261707 LCA10Q71F78 164 aa7.45□□□□□ -1.22
SLC6A4-201ENST00000261707 MED13LQ71F56 2210 aa7.45□□□□□ -1.22
SLC6A4-201ENST00000261707 SSBP3-AS1Q7Z2R9 100 aa7.45□□□□□ -1.22
SLC6A4-201ENST00000261707 FAM208BQ5VWN6 2430 aa7.44□□□□□ -1.22
SLC6A4-201ENST00000261707 PRRC2AP48634 2157 aaKnown RBP7.44□□□□□ -1.22
SLC6A4-201ENST00000261707 AVPP01185 164 aa7.44□□□□□ -1.22
SLC6A4-201ENST00000261707 TECTAO75443 2155 aa7.44□□□□□ -1.22
SLC6A4-201ENST00000261707 LYPD5Q6UWN5 251 aa7.44□□□□□ -1.22
SLC6A4-201ENST00000261707 Q8NBF4 154 aa7.43□□□□□ -1.22
SLC6A4-201ENST00000261707 KLKP1Q107X0 134 aa7.43□□□□□ -1.22
SLC6A4-201ENST00000261707 CDSNQ15517 529 aa7.42□□□□□ -1.22
SLC6A4-201ENST00000261707 LOC101927531A0A1B0GV80 90 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms