RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 F8WEM9 126 aa5.08□□□□□ -1.6
CSDE1-201ENST00000261443 BCE1O60756 84 aa5.08□□□□□ -1.6
CSDE1-201ENST00000261443 LY6G6DO95868 133 aa5.08□□□□□ -1.6
CSDE1-201ENST00000261443 KLKP1Q107X0 134 aa5.08□□□□□ -1.6
CSDE1-201ENST00000261443 Q6ZTI0 123 aa5.08□□□□□ -1.6
CSDE1-201ENST00000261443 RMI2Q96E14 147 aa5.08□□□□□ -1.6
CSDE1-201ENST00000261443 LINC00167Q96N53 147 aa5.08□□□□□ -1.6
CSDE1-201ENST00000261443 TRBV10-1A0A0K0K1A3 114 aa5.08□□□□□ -1.6
CSDE1-201ENST00000261443 A8MTW9 85 aa5.08□□□□□ -1.6
CSDE1-201ENST00000261443 F8WDY8 70 aa5.07□□□□□ -1.6
CSDE1-201ENST00000261443 INSP01308 110 aa5.07□□□□□ -1.6
CSDE1-201ENST00000261443 RBM3P98179 157 aaKnown RBP5.07□□□□□ -1.6
CSDE1-201ENST00000261443 TMEM86BQ8N661 226 aa5.07□□□□□ -1.6
CSDE1-201ENST00000261443 TEX15Q9BXT5 2789 aa5.07□□□□□ -1.6
CSDE1-201ENST00000261443 C11orf68Q9H3H3 251 aaKnown RBP5.07□□□□□ -1.6
CSDE1-201ENST00000261443 TRAV10A0A0B4J240 114 aa5.06□□□□□ -1.6
CSDE1-201ENST00000261443 HAMPP81172 84 aa5.06□□□□□ -1.6
CSDE1-201ENST00000261443 CHD6Q8TD26 2715 aa5.06□□□□□ -1.6
CSDE1-201ENST00000261443 BRK1Q8WUW1 75 aa5.06□□□□□ -1.6
CSDE1-201ENST00000261443 LINC00474Q9P2X8 69 aa5.06□□□□□ -1.6
CSDE1-201ENST00000261443 TRBV7-6A0A0J9YX20 115 aa5.05□□□□□ -1.6
CSDE1-201ENST00000261443 AVPP01185 164 aa5.05□□□□□ -1.6
CSDE1-201ENST00000261443 LINC01547P58512 204 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-201ENST00000261443 C6orf226Q5I0X4 101 aa5.05□□□□□ -1.6
CSDE1-201ENST00000261443 LINC00482Q8N8I6 264 aa5.05□□□□□ -1.6
CSDE1-201ENST00000261443 KMT2BQ9UMN6 2715 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-201ENST00000261443 FN1P02751 2386 aaKnown RBP5.05□□□□□ -1.6
CSDE1-201ENST00000261443 IGHV3OR16-9A0A0B4J2B5 98 aa5.05□□□□□ -1.6
CSDE1-201ENST00000261443 A0A096LNT2 108 aa5.04□□□□□ -1.6
CSDE1-201ENST00000261443 IGHV4-61A0A0C4DH41 118 aa5.04□□□□□ -1.6
CSDE1-201ENST00000261443 A0A0U1RQV1 116 aa5.04□□□□□ -1.6
CSDE1-201ENST00000261443 PRR3P79522 188 aaKnown RBP5.04□□□□□ -1.6
CSDE1-201ENST00000261443 Q6ZQT0 140 aa5.04□□□□□ -1.6
CSDE1-201ENST00000261443 MAP6D1Q9H9H5 199 aa5.04□□□□□ -1.6
CSDE1-201ENST00000261443 ZNF462Q96JM2 2506 aa5.04□□□□□ -1.6
CSDE1-201ENST00000261443 A0A087WZ39 114 aa5.04□□□□□ -1.6
CSDE1-201ENST00000261443 NANOS2P60321 138 aaKnown RBP5.04□□□□□ -1.6
CSDE1-201ENST00000261443 IGSF10Q6WRI0 2623 aa5.04□□□□□ -1.6
CSDE1-201ENST00000261443 UBE2E2Q96LR5 201 aa5.04□□□□□ -1.6
CSDE1-201ENST00000261443 NBEAL2Q6ZNJ1 2754 aa5.04□□□□□ -1.6
CSDE1-201ENST00000261443 IGLV4-60A0A075B6I1 120 aa5.04□□□□□ -1.6
CSDE1-201ENST00000261443 NDUFC1O43677 76 aa5.04□□□□□ -1.6
CSDE1-201ENST00000261443 SLURP1P55000 103 aa5.04□□□□□ -1.6
CSDE1-201ENST00000261443 Q6ZVQ6 151 aa5.03□□□□□ -1.6
CSDE1-201ENST00000261443 LAMTOR3Q9UHA4 124 aa5.03□□□□□ -1.6
CSDE1-201ENST00000261443 C19orf84I3L1E1 186 aa5.03□□□□□ -1.6
CSDE1-201ENST00000261443 IGHV4-59P01825 116 aa5.03□□□□□ -1.6
CSDE1-201ENST00000261443 HIVEP2P31629 2446 aa5.03□□□□□ -1.6
CSDE1-201ENST00000261443 LOC100131303A0A0U1RQF7 123 aa5.02□□□□□ -1.61
CSDE1-201ENST00000261443 DEFB136Q30KP8 78 aa5.02□□□□□ -1.61
CSDE1-201ENST00000261443 C1orf195Q5TG92 126 aa5.02□□□□□ -1.61
CSDE1-201ENST00000261443 ANKRD17O75179 2603 aaKnown RBP5.02□□□□□ -1.61
CSDE1-201ENST00000261443 M0R2N4 97 aa5.02□□□□□ -1.61
CSDE1-201ENST00000261443 ATP5EP56381 51 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-201ENST00000261443 Q8N3U1 123 aa5.02□□□□□ -1.61
CSDE1-201ENST00000261443 TM2D3Q9BRN9 247 aa5.02□□□□□ -1.61
CSDE1-201ENST00000261443 V9GYY9 64 aa5.02□□□□□ -1.61
CSDE1-201ENST00000261443 LOC110117498A0A087WWA1 95 aa5.02□□□□□ -1.61
CSDE1-201ENST00000261443 MIFP14174 115 aa5.02□□□□□ -1.61
CSDE1-201ENST00000261443 C6orf99Q4VX62 202 aa5.02□□□□□ -1.61
CSDE1-201ENST00000261443 C1orf158Q8N1D5 194 aa5.02□□□□□ -1.61
CSDE1-201ENST00000261443 IL17DQ8TAD2 202 aa5.02□□□□□ -1.61
CSDE1-201ENST00000261443 ZNF561-AS1K7EIQ3 104 aa5.01□□□□□ -1.61
CSDE1-201ENST00000261443 KHDC1LQ5JSQ8 128 aa5.01□□□□□ -1.61
CSDE1-201ENST00000261443 DYNLRB2Q8TF09 96 aa5.01□□□□□ -1.61
CSDE1-201ENST00000261443 CXCL6P80162 114 aa5.01□□□□□ -1.61
CSDE1-201ENST00000261443 NOP10Q9NPE3 64 aaKnown RBP5.01□□□□□ -1.61
CSDE1-201ENST00000261443 PRB1P04280 392 aa5.01□□□□□ -1.61
CSDE1-201ENST00000261443 MSMBP08118 114 aa5.01□□□□□ -1.61
CSDE1-201ENST00000261443 SEC61GP60059 68 aa5.01□□□□□ -1.61
CSDE1-201ENST00000261443 MPLKIPQ8TAP9 179 aa5.01□□□□□ -1.61
CSDE1-201ENST00000261443 TRGV2A0A075B6R0 118 aa5□□□□□ -1.61
CSDE1-201ENST00000261443 LINC00959A0A1B0GUT2 108 aa5□□□□□ -1.61
CSDE1-201ENST00000261443 DEFB112Q30KQ8 113 aa5□□□□□ -1.61
CSDE1-201ENST00000261443 LINC00575Q6W349 94 aa5□□□□□ -1.61
CSDE1-201ENST00000261443 C18orf65Q6ZTR6 163 aa5□□□□□ -1.61
CSDE1-201ENST00000261443 STHQ8IWL8 128 aa5□□□□□ -1.61
CSDE1-201ENST00000261443 C6orf223Q8N319 242 aa5□□□□□ -1.61
CSDE1-201ENST00000261443 TRBV7-4A0A0J9YYF1 115 aa5□□□□□ -1.61
CSDE1-201ENST00000261443 TRBV6-8A0A0A6YYG3 113 aa4.99□□□□□ -1.61
CSDE1-201ENST00000261443 SCXQ7RTU7 201 aa4.99□□□□□ -1.61
CSDE1-201ENST00000261443 C11orf44Q8N8P7 122 aa4.99□□□□□ -1.61
CSDE1-201ENST00000261443 A0A1W2PRX2 142 aa4.99□□□□□ -1.61
CSDE1-201ENST00000261443 Q8IZM0 81 aa4.99□□□□□ -1.61
CSDE1-201ENST00000261443 ZNF843Q8N446 348 aa4.99□□□□□ -1.61
CSDE1-201ENST00000261443 TRGV4A0A0C4DH28 118 aa4.99□□□□□ -1.61
CSDE1-201ENST00000261443 NREPQ16612 68 aa4.99□□□□□ -1.61
CSDE1-201ENST00000261443 FAM229BQ4G0N7 80 aa4.99□□□□□ -1.61
CSDE1-201ENST00000261443 TMEM254Q8TBM7 123 aa4.98□□□□□ -1.61
CSDE1-201ENST00000261443 PDE6GP18545 87 aa4.98□□□□□ -1.61
CSDE1-201ENST00000261443 ANK3Q12955 4377 aaKnown RBP4.98□□□□□ -1.61
CSDE1-201ENST00000261443 IGHV4-30-2A0A087WSY4 118 aa4.97□□□□□ -1.61
CSDE1-201ENST00000261443 DEFB114Q30KQ6 69 aa4.97□□□□□ -1.61
CSDE1-201ENST00000261443 BPY2O14599 106 aa4.97□□□□□ -1.61
CSDE1-201ENST00000261443 ODF3L2Q3SX64 289 aa4.97□□□□□ -1.61
CSDE1-201ENST00000261443 C9orf66Q5T8R8 295 aa4.97□□□□□ -1.61
CSDE1-201ENST00000261443 USP24Q9UPU5 2620 aa4.96□□□□□ -1.61
CSDE1-201ENST00000261443 CLPSL2Q6UWE3 100 aa4.96□□□□□ -1.62
CSDE1-201ENST00000261443 Q6ZQY7 126 aa4.96□□□□□ -1.62
CSDE1-201ENST00000261443 MUC7Q8TAX7 377 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms