RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 SPAG11BQ08648 103 aa13.57□□□□□ -0.24
RTCA-201ENST00000260563 KIAA0087Q14695 138 aa13.56□□□□□ -0.24
RTCA-201ENST00000260563 C6orf226Q5I0X4 101 aa13.56□□□□□ -0.24
RTCA-201ENST00000260563 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.55□□□□□ -0.24
RTCA-201ENST00000260563 HIGD2BQ4VC39 106 aa13.55□□□□□ -0.24
RTCA-201ENST00000260563 DNAH5Q8TE73 4624 aa13.55□□□□□ -0.24
RTCA-201ENST00000260563 GVQW2A0A096LPI5 108 aaPredicted RBP13.54□□□□□ -0.24
RTCA-201ENST00000260563 PRO1933Q9H354 126 aa13.54□□□□□ -0.24
RTCA-201ENST00000260563 NDUFA12Q9UI09 145 aa13.54□□□□□ -0.24
RTCA-201ENST00000260563 ZNF815PA8K554 130 aa13.54□□□□□ -0.24
RTCA-201ENST00000260563 ZNF561-AS1K7EIQ3 104 aa13.54□□□□□ -0.24
RTCA-201ENST00000260563 KRTAP10-2P60368 255 aa13.54□□□□□ -0.24
RTCA-201ENST00000260563 BOD1L2Q8IYS8 172 aa13.54□□□□□ -0.24
RTCA-201ENST00000260563 NTN5Q8WTR8 489 aaPredicted RBP13.54□□□□□ -0.24
RTCA-201ENST00000260563 MYMXA0A1B0GTQ4 84 aa13.53□□□□□ -0.24
RTCA-201ENST00000260563 PKHD1P08F94 4074 aa13.52□□□□□ -0.24
RTCA-201ENST00000260563 NDUFA1O15239 70 aa13.52□□□□□ -0.25
RTCA-201ENST00000260563 CXCL5P42830 114 aa13.52□□□□□ -0.25
RTCA-201ENST00000260563 SLC25A34Q6PIV7 304 aa13.52□□□□□ -0.25
RTCA-201ENST00000260563 LINC00526Q96FQ7 95 aa13.52□□□□□ -0.25
RTCA-201ENST00000260563 DLEU1O43261 78 aa13.51□□□□□ -0.25
RTCA-201ENST00000260563 CKS1BP61024 79 aa13.51□□□□□ -0.25
RTCA-201ENST00000260563 ZNF625Q96I27 306 aaPredicted RBP13.51□□□□□ -0.25
RTCA-201ENST00000260563 PGPEP1Q9NXJ5 209 aa13.51□□□□□ -0.25
RTCA-201ENST00000260563 TP73-AS1Q9UF72 201 aa13.51□□□□□ -0.25
RTCA-201ENST00000260563 EPPK1P58107 5090 aaKnown RBP13.51□□□□□ -0.25
RTCA-201ENST00000260563 IGLV5-52A0A0A0MRZ9 124 aa13.5□□□□□ -0.25
RTCA-201ENST00000260563 SFTA2Q6UW10 78 aa13.5□□□□□ -0.25
RTCA-201ENST00000260563 TSTD3H0UI37 97 aa13.49□□□□□ -0.25
RTCA-201ENST00000260563 FUSP35637 526 aaKnown RBP eCLIP13.49□□□□□ -0.25
RTCA-201ENST00000260563 C2orf82Q6UX34 121 aa13.49□□□□□ -0.25
RTCA-201ENST00000260563 UQCR10Q9UDW1 63 aa13.49□□□□□ -0.25
RTCA-201ENST00000260563 C2orf48Q96LS8 159 aa13.49□□□□□ -0.25
RTCA-201ENST00000260563 HERV-K104P63124 156 aa13.48□□□□□ -0.25
RTCA-201ENST00000260563 SCGB1D4Q6XE38 83 aa13.47□□□□□ -0.25
RTCA-201ENST00000260563 CAMK2N2Q96S95 79 aa13.47□□□□□ -0.25
RTCA-201ENST00000260563 A0A0J9YXY3 114 aa13.46□□□□□ -0.25
RTCA-201ENST00000260563 F8WDY8 70 aa13.46□□□□□ -0.25
RTCA-201ENST00000260563 MIEN1Q9BRT3 115 aa13.46□□□□□ -0.25
RTCA-201ENST00000260563 C16orf90A8MZG2 172 aa13.45□□□□□ -0.26
RTCA-201ENST00000260563 CNBPP62633 177 aaKnown RBP13.44□□□□□ -0.26
RTCA-201ENST00000260563 C10orf25Q5T742 122 aa13.44□□□□□ -0.26
RTCA-201ENST00000260563 UNQ6190/PRO20217Q6UXQ8 127 aa13.44□□□□□ -0.26
RTCA-201ENST00000260563 DYNC1H1Q14204 4646 aaKnown RBP13.44□□□□□ -0.26
RTCA-201ENST00000260563 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.44□□□□□ -0.26
RTCA-201ENST00000260563 SLPIP03973 132 aa13.42□□□□□ -0.26
RTCA-201ENST00000260563 SYCNQ0VAF6 134 aa13.42□□□□□ -0.26
RTCA-201ENST00000260563 MEIG1Q5JSS6 88 aa13.42□□□□□ -0.26
RTCA-201ENST00000260563 Q6ZRU5 148 aa13.42□□□□□ -0.26
RTCA-201ENST00000260563 C2orf91Q6ZV80 131 aa13.41□□□□□ -0.26
RTCA-201ENST00000260563 C6orf48Q9UBA6 75 aa13.41□□□□□ -0.26
RTCA-201ENST00000260563 TRBV30A0A0K0K1B3 111 aa13.4□□□□□ -0.26
RTCA-201ENST00000260563 GCSHP23434 173 aa13.4□□□□□ -0.26
RTCA-201ENST00000260563 LINC00587B1AMM8 73 aa13.39□□□□□ -0.27
RTCA-201ENST00000260563 HNRNPA3P51991 378 aaKnown RBP13.39□□□□□ -0.27
RTCA-201ENST00000260563 CARD19Q96LW7 228 aa13.39□□□□□ -0.27
RTCA-201ENST00000260563 HIGD1BQ9P298 99 aa13.39□□□□□ -0.27
RTCA-201ENST00000260563 ERG28Q9UKR5 140 aa13.39□□□□□ -0.27
RTCA-201ENST00000260563 LRP1BQ9NZR2 4599 aa13.39□□□□□ -0.27
RTCA-201ENST00000260563 CIRBPQ14011 172 aaKnown RBP13.39□□□□□ -0.27
RTCA-201ENST00000260563 C9orf163Q8N9P6 203 aa13.39□□□□□ -0.27
RTCA-201ENST00000260563 TIMM17BO60830 172 aa13.38□□□□□ -0.27
RTCA-201ENST00000260563 LINC01620Q4KN68 170 aa13.38□□□□□ -0.27
RTCA-201ENST00000260563 C9orf116Q5BN46 136 aaPredicted RBP13.38□□□□□ -0.27
RTCA-201ENST00000260563 TMEM238C9JI98 176 aa13.37□□□□□ -0.27
RTCA-201ENST00000260563 SMIM13P0DJ93 91 aa13.37□□□□□ -0.27
RTCA-201ENST00000260563 PFN2P35080 140 aa13.37□□□□□ -0.27
RTCA-201ENST00000260563 LITAFQ99732 161 aa13.37□□□□□ -0.27
RTCA-201ENST00000260563 A0A0U1RRA0 63 aa13.36□□□□□ -0.27
RTCA-201ENST00000260563 COX17Q14061 63 aa13.36□□□□□ -0.27
RTCA-201ENST00000260563 DDTP30046 118 aa13.35□□□□□ -0.27
RTCA-201ENST00000260563 LINC00158P58513 81 aa13.35□□□□□ -0.27
RTCA-201ENST00000260563 RNF151Q2KHN1 245 aa13.35□□□□□ -0.27
RTCA-201ENST00000260563 ADAMTSL4-AS1Q5T5F5 129 aa13.34□□□□□ -0.27
RTCA-201ENST00000260563 SPANXB1Q9NS25 103 aaPredicted RBP13.34□□□□□ -0.27
RTCA-201ENST00000260563 KRTAP10-1P60331 282 aa13.34□□□□□ -0.27
RTCA-201ENST00000260563 PCP4L1A6NKN8 68 aa13.32□□□□□ -0.28
RTCA-201ENST00000260563 SRSF9Q13242 221 aaKnown RBP eCLIP13.32□□□□□ -0.28
RTCA-201ENST00000260563 DAND5Q8N907 189 aa13.32□□□□□ -0.28
RTCA-201ENST00000260563 SPANXDQ9BXN6 97 aa13.32□□□□□ -0.28
RTCA-201ENST00000260563 SPANXCQ9NY87 97 aa13.32□□□□□ -0.28
RTCA-201ENST00000260563 MIR7-3HGQ8N6C7 128 aa13.31□□□□□ -0.28
RTCA-201ENST00000260563 HIST1H4GQ99525 98 aa13.31□□□□□ -0.28
RTCA-201ENST00000260563 DNAH8Q96JB1 4490 aa13.31□□□□□ -0.28
RTCA-201ENST00000260563 Q6ZVH6 145 aa13.3□□□□□ -0.28
RTCA-201ENST00000260563 PKIGQ9Y2B9 76 aa13.3□□□□□ -0.28
RTCA-201ENST00000260563 NDUFC2-KCTD14E9PQ53 114 aa13.29□□□□□ -0.28
RTCA-201ENST00000260563 CTAG1AP78358 180 aa13.29□□□□□ -0.28
RTCA-201ENST00000260563 TLX1NBP0CAT3 122 aa13.29□□□□□ -0.28
RTCA-201ENST00000260563 TAL2Q16559 108 aa13.29□□□□□ -0.28
RTCA-201ENST00000260563 HSD52Q0P140 79 aa13.28□□□□□ -0.28
RTCA-201ENST00000260563 SDIM1Q6ZPB5 146 aa13.28□□□□□ -0.28
RTCA-201ENST00000260563 BIRC6Q9NR09 4857 aa13.27□□□□□ -0.29
RTCA-201ENST00000260563 NPC2P61916 151 aa13.27□□□□□ -0.29
RTCA-201ENST00000260563 LOC107984640A0A0U1RRK4 108 aa13.26□□□□□ -0.29
RTCA-201ENST00000260563 IFITM1P13164 125 aa13.25□□□□□ -0.29
RTCA-201ENST00000260563 RPL18AQ02543 176 aaKnown RBP13.25□□□□□ -0.29
RTCA-201ENST00000260563 Q6ZRP5 223 aa13.25□□□□□ -0.29
RTCA-201ENST00000260563 LINC00308Q8TCZ7 52 aa13.25□□□□□ -0.29
RTCA-201ENST00000260563 APOBP04114 4563 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms