RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 TRBV7-6A0A0J9YX20 115 aa2.85□□□□□ -1.95
RNF38-201ENST00000259605 C8orf87E5RJ46 101 aa2.85□□□□□ -1.95
RNF38-201ENST00000259605 RPS28P62857 69 aaKnown RBP2.85□□□□□ -1.95
RNF38-201ENST00000259605 C1orf195Q5TG92 126 aa2.85□□□□□ -1.95
RNF38-201ENST00000259605 LINC00528Q8N1L1 170 aa2.85□□□□□ -1.95
RNF38-201ENST00000259605 HIGD1BQ9P298 99 aa2.85□□□□□ -1.95
RNF38-201ENST00000259605 TET2Q6N021 2002 aaPredicted RBP2.85□□□□□ -1.95
RNF38-201ENST00000259605 COL4A1P02462 1669 aa2.84□□□□□ -1.95
RNF38-201ENST00000259605 Q6ZSA8 131 aa2.84□□□□□ -1.95
RNF38-201ENST00000259605 SSBP3-AS1Q7Z2R9 100 aa2.84□□□□□ -1.95
RNF38-201ENST00000259605 ZNF22P17026 224 aaPredicted RBP2.84□□□□□ -1.95
RNF38-201ENST00000259605 LINC00313P59037 77 aa2.84□□□□□ -1.95
RNF38-201ENST00000259605 TM2D3Q9BRN9 247 aa2.84□□□□□ -1.95
RNF38-201ENST00000259605 TP53AIP1Q9HCN2 124 aa2.84□□□□□ -1.95
RNF38-201ENST00000259605 C7orf65Q6ZTY9 151 aa2.84□□□□□ -1.96
RNF38-201ENST00000259605 LINC00643Q86TS7 51 aa2.84□□□□□ -1.96
RNF38-201ENST00000259605 TLN2Q9Y4G6 2542 aa2.84□□□□□ -1.96
RNF38-201ENST00000259605 IGLV5-37A0A075B6J1 123 aa2.83□□□□□ -1.96
RNF38-201ENST00000259605 A0A087WSZ3 146 aa2.83□□□□□ -1.96
RNF38-201ENST00000259605 CCDC179H3BU77 68 aa2.83□□□□□ -1.96
RNF38-201ENST00000259605 ZNF575Q86XF7 245 aa2.83□□□□□ -1.96
RNF38-201ENST00000259605 BCE1O60756 84 aa2.83□□□□□ -1.96
RNF38-201ENST00000259605 LINC00694P0DN24 101 aa2.83□□□□□ -1.96
RNF38-201ENST00000259605 TEN1Q86WV5 123 aa2.83□□□□□ -1.96
RNF38-201ENST00000259605 LINC00476Q8WZB0 136 aa2.83□□□□□ -1.96
RNF38-201ENST00000259605 TRBV10-3A0A0K0K1G6 114 aa2.83□□□□□ -1.96
RNF38-201ENST00000259605 COL4A4P53420 1690 aaPredicted RBP2.83□□□□□ -1.96
RNF38-201ENST00000259605 IGLV4-60A0A075B6I1 120 aa2.83□□□□□ -1.96
RNF38-201ENST00000259605 SEC61BP60468 96 aaKnown RBP2.83□□□□□ -1.96
RNF38-201ENST00000259605 RETNLBQ9BQ08 111 aa2.83□□□□□ -1.96
RNF38-201ENST00000259605 FLNBO75369 2602 aaKnown RBP2.82□□□□□ -1.96
RNF38-201ENST00000259605 RNASE3P12724 160 aaKnown RBP2.82□□□□□ -1.96
RNF38-201ENST00000259605 PRLHP81277 87 aa2.82□□□□□ -1.96
RNF38-201ENST00000259605 HEATR5AQ86XA9 2040 aa2.82□□□□□ -1.96
RNF38-201ENST00000259605 NYNRINQ9P2P1 1898 aaKnown RBP2.82□□□□□ -1.96
RNF38-201ENST00000259605 KIF26AQ9ULI4 1882 aaPredicted RBP2.82□□□□□ -1.96
RNF38-201ENST00000259605 COL5A1P20908 1838 aaPredicted RBP2.82□□□□□ -1.96
RNF38-201ENST00000259605 HELZP42694 1942 aaKnown RBP2.82□□□□□ -1.96
RNF38-201ENST00000259605 IGLV1-50A0A075B6I6 118 aa2.82□□□□□ -1.96
RNF38-201ENST00000259605 Q6ZRU5 148 aa2.82□□□□□ -1.96
RNF38-201ENST00000259605 LINC00173Q6ZV60 143 aa2.82□□□□□ -1.96
RNF38-201ENST00000259605 Q96NJ1 140 aa2.82□□□□□ -1.96
RNF38-201ENST00000259605 LINC00588Q9Y4M8 146 aa2.82□□□□□ -1.96
RNF38-201ENST00000259605 POLQO75417 2590 aa2.82□□□□□ -1.96
RNF38-201ENST00000259605 OXTP01178 125 aa2.82□□□□□ -1.96
RNF38-201ENST00000259605 SMR3BP02814 79 aaPredicted RBP2.82□□□□□ -1.96
RNF38-201ENST00000259605 SPTBN4Q9H254 2564 aa2.82□□□□□ -1.96
RNF38-201ENST00000259605 A0A1B0GW54 56 aa2.82□□□□□ -1.96
RNF38-201ENST00000259605 A0A1W2PPR1 153 aa2.82□□□□□ -1.96
RNF38-201ENST00000259605 TSHBP01222 138 aa2.82□□□□□ -1.96
RNF38-201ENST00000259605 DNAH10OSP0CZ25 163 aa2.81□□□□□ -1.96
RNF38-201ENST00000259605 FAM30AQ9NZY2 134 aa2.81□□□□□ -1.96
RNF38-201ENST00000259605 MUC4Q99102 2169 aa2.81□□□□□ -1.96
RNF38-201ENST00000259605 A0A087WTM6 91 aa2.81□□□□□ -1.96
RNF38-201ENST00000259605 UQCRQO14949 82 aa2.81□□□□□ -1.96
RNF38-201ENST00000259605 ZNF80P51504 273 aaPredicted RBP2.81□□□□□ -1.96
RNF38-201ENST00000259605 WFDC2Q14508 124 aa2.81□□□□□ -1.96
RNF38-201ENST00000259605 CELA1Q9UNI1 258 aa2.81□□□□□ -1.96
RNF38-201ENST00000259605 LTBP2Q14767 1821 aa2.81□□□□□ -1.96
RNF38-201ENST00000259605 HCG22E2RYF7 251 aa2.8□□□□□ -1.96
RNF38-201ENST00000259605 VPREB1P12018 145 aa2.8□□□□□ -1.96
RNF38-201ENST00000259605 CASC10Q5T4H9 136 aa2.8□□□□□ -1.96
RNF38-201ENST00000259605 SCXQ7RTU7 201 aa2.8□□□□□ -1.96
RNF38-201ENST00000259605 TNRC6AQ8NDV7 1962 aaKnown RBP2.8□□□□□ -1.96
RNF38-201ENST00000259605 NTM-AS1Q6ZSK4 140 aa2.8□□□□□ -1.96
RNF38-201ENST00000259605 LINC00208Q96KT6 92 aa2.8□□□□□ -1.96
RNF38-201ENST00000259605 IGHV3OR16-9A0A0B4J2B5 98 aa2.8□□□□□ -1.96
RNF38-201ENST00000259605 A6NED7 52 aa2.8□□□□□ -1.96
RNF38-201ENST00000259605 LINC01547P58512 204 aaPredicted RBP2.8□□□□□ -1.96
RNF38-201ENST00000259605 SDIM1Q6ZPB5 146 aa2.8□□□□□ -1.96
RNF38-201ENST00000259605 PLXNA2O75051 1894 aa2.8□□□□□ -1.96
RNF38-201ENST00000259605 IGLV7-46A0A075B6I9 117 aa2.8□□□□□ -1.96
RNF38-201ENST00000259605 TP73-AS1Q9UF72 201 aa2.8□□□□□ -1.96
RNF38-201ENST00000259605 NOTCH4Q99466 2003 aa2.8□□□□□ -1.96
RNF38-201ENST00000259605 NCOA6Q14686 2063 aaPredicted RBP2.8□□□□□ -1.96
RNF38-201ENST00000259605 A0A087WYN8 130 aa2.79□□□□□ -1.96
RNF38-201ENST00000259605 LCE6AA0A183 80 aa2.79□□□□□ -1.96
RNF38-201ENST00000259605 ANAPC1Q9H1A4 1944 aa2.79□□□□□ -1.96
RNF38-201ENST00000259605 POLR2KP53803 58 aaKnown RBP2.79□□□□□ -1.96
RNF38-201ENST00000259605 KRTAP21-3Q3LHN1 58 aa2.79□□□□□ -1.96
RNF38-201ENST00000259605 COL4A3Q01955 1670 aa2.79□□□□□ -1.96
RNF38-201ENST00000259605 LINC00167Q96N53 147 aa2.79□□□□□ -1.96
RNF38-201ENST00000259605 LOC100996750A0A140TA64 210 aa2.79□□□□□ -1.96
RNF38-201ENST00000259605 FAM240AA0A1B0GVK7 77 aa2.79□□□□□ -1.96
RNF38-201ENST00000259605 K7ERJ3 54 aa2.79□□□□□ -1.96
RNF38-201ENST00000259605 KRTAP4-6Q9BYQ5 205 aa2.79□□□□□ -1.96
RNF38-201ENST00000259605 C19orf73Q9NVV2 129 aa2.79□□□□□ -1.96
RNF38-201ENST00000259605 ZNF861PO60384 105 aa2.78□□□□□ -1.96
RNF38-201ENST00000259605 CXCL6P80162 114 aa2.78□□□□□ -1.96
RNF38-201ENST00000259605 LINC00242Q5T6M2 205 aa2.78□□□□□ -1.96
RNF38-201ENST00000259605 Q8N814 137 aa2.78□□□□□ -1.96
RNF38-201ENST00000259605 Q8NAQ8 132 aa2.78□□□□□ -1.96
RNF38-201ENST00000259605 CHTF8P0CG12 524 aa2.78□□□□□ -1.96
RNF38-201ENST00000259605 ENHOQ6UWT2 76 aa2.78□□□□□ -1.96
RNF38-201ENST00000259605 PHF5AQ7RTV0 110 aaKnown RBP2.78□□□□□ -1.96
RNF38-201ENST00000259605 SMIM11BQ8TCY0 68 aa2.78□□□□□ -1.96
RNF38-201ENST00000259605 GVQW2A0A096LPI5 108 aaPredicted RBP2.78□□□□□ -1.97
RNF38-201ENST00000259605 C4orf26Q17RF5 130 aa2.78□□□□□ -1.97
RNF38-201ENST00000259605 H0Y9P7 68 aa2.77□□□□□ -1.97
RNF38-201ENST00000259605 HRES1P13985 223 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms