RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 C12orf57Q99622 126 aa10.24□□□□□ -0.77
GYPC-201ENST00000259254 NDUFA12Q9UI09 145 aa10.24□□□□□ -0.77
GYPC-201ENST00000259254 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.23□□□□□ -0.77
GYPC-201ENST00000259254 NDUFA1O15239 70 aa10.23□□□□□ -0.77
GYPC-201ENST00000259254 CXCL5P42830 114 aa10.23□□□□□ -0.77
GYPC-201ENST00000259254 TNP2Q05952 138 aa10.23□□□□□ -0.77
GYPC-201ENST00000259254 TTTY13Q9BZ97 58 aa10.23□□□□□ -0.77
GYPC-201ENST00000259254 DNAH17Q9UFH2 4485 aa10.23□□□□□ -0.77
GYPC-201ENST00000259254 FAT2Q9NYQ8 4349 aa10.23□□□□□ -0.77
GYPC-201ENST00000259254 MYMXA0A1B0GTQ4 84 aa10.22□□□□□ -0.77
GYPC-201ENST00000259254 ZNF815PA8K554 130 aa10.22□□□□□ -0.77
GYPC-201ENST00000259254 PCP2Q8IVA1 136 aa10.22□□□□□ -0.77
GYPC-201ENST00000259254 C2orf48Q96LS8 159 aa10.22□□□□□ -0.77
GYPC-201ENST00000259254 SYCNQ0VAF6 134 aa10.21□□□□□ -0.77
GYPC-201ENST00000259254 UNQ6190/PRO20217Q6UXQ8 127 aa10.21□□□□□ -0.77
GYPC-201ENST00000259254 Q8N814 137 aa10.21□□□□□ -0.77
GYPC-201ENST00000259254 ZNF625Q96I27 306 aaPredicted RBP10.21□□□□□ -0.77
GYPC-201ENST00000259254 C14orf144Q96I85 54 aa10.21□□□□□ -0.77
GYPC-201ENST00000259254 F8WDY8 70 aa10.2□□□□□ -0.78
GYPC-201ENST00000259254 SFTA2Q6UW10 78 aa10.2□□□□□ -0.78
GYPC-201ENST00000259254 LINC00518Q8N0U6 118 aa10.2□□□□□ -0.78
GYPC-201ENST00000259254 A0A1B0GVY2 172 aa10.19□□□□□ -0.78
GYPC-201ENST00000259254 COX8AP10176 69 aa10.19□□□□□ -0.78
GYPC-201ENST00000259254 HERV-K104P63124 156 aa10.19□□□□□ -0.78
GYPC-201ENST00000259254 C10orf25Q5T742 122 aa10.19□□□□□ -0.78
GYPC-201ENST00000259254 Q6ZRU5 148 aa10.19□□□□□ -0.78
GYPC-201ENST00000259254 CARD19Q96LW7 228 aa10.19□□□□□ -0.78
GYPC-201ENST00000259254 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.18□□□□□ -0.78
GYPC-201ENST00000259254 MEIG1Q5JSS6 88 aa10.18□□□□□ -0.78
GYPC-201ENST00000259254 SCGB1D4Q6XE38 83 aa10.18□□□□□ -0.78
GYPC-201ENST00000259254 SLC25A34Q6PIV7 304 aa10.17□□□□□ -0.78
GYPC-201ENST00000259254 PRO1933Q9H354 126 aa10.17□□□□□ -0.78
GYPC-201ENST00000259254 SLPIP03973 132 aa10.16□□□□□ -0.78
GYPC-201ENST00000259254 BOD1L2Q8IYS8 172 aa10.16□□□□□ -0.78
GYPC-201ENST00000259254 C6orf48Q9UBA6 75 aa10.16□□□□□ -0.78
GYPC-201ENST00000259254 TP73-AS1Q9UF72 201 aa10.16□□□□□ -0.78
GYPC-201ENST00000259254 A0A0J9YXY3 114 aa10.15□□□□□ -0.78
GYPC-201ENST00000259254 TRBV30A0A0K0K1B3 111 aa10.15□□□□□ -0.78
GYPC-201ENST00000259254 A0A0U1RRA0 63 aa10.15□□□□□ -0.78
GYPC-201ENST00000259254 PFN2P35080 140 aa10.15□□□□□ -0.78
GYPC-201ENST00000259254 CNBPP62633 177 aaKnown RBP10.15□□□□□ -0.78
GYPC-201ENST00000259254 ERG28Q9UKR5 140 aa10.15□□□□□ -0.78
GYPC-201ENST00000259254 HERC2O95714 4834 aa10.15□□□□□ -0.78
GYPC-201ENST00000259254 C9orf116Q5BN46 136 aaPredicted RBP10.14□□□□□ -0.79
GYPC-201ENST00000259254 IGLV5-52A0A0A0MRZ9 124 aa10.13□□□□□ -0.79
GYPC-201ENST00000259254 LINC00587B1AMM8 73 aa10.13□□□□□ -0.79
GYPC-201ENST00000259254 DLEU1O43261 78 aa10.13□□□□□ -0.79
GYPC-201ENST00000259254 SMIM13P0DJ93 91 aa10.13□□□□□ -0.79
GYPC-201ENST00000259254 LINC00158P58513 81 aa10.13□□□□□ -0.79
GYPC-201ENST00000259254 CIRBPQ14011 172 aaKnown RBP10.13□□□□□ -0.79
GYPC-201ENST00000259254 UQCR10Q9UDW1 63 aa10.13□□□□□ -0.79
GYPC-201ENST00000259254 PKD1P98161 4303 aa10.12□□□□□ -0.79
GYPC-201ENST00000259254 FUSP35637 526 aaKnown RBP eCLIP10.12□□□□□ -0.791e-6■■□□□ 11.7
GYPC-201ENST00000259254 RNF151Q2KHN1 245 aa10.12□□□□□ -0.79
GYPC-201ENST00000259254 PKHD1P08F94 4074 aa10.12□□□□□ -0.79
GYPC-201ENST00000259254 TSTD3H0UI37 97 aa10.11□□□□□ -0.79
GYPC-201ENST00000259254 DNAH11Q96DT5 4516 aa10.11□□□□□ -0.79
GYPC-201ENST00000259254 DYNC1H1Q14204 4646 aaKnown RBP10.11□□□□□ -0.79
GYPC-201ENST00000259254 TMEM238C9JI98 176 aa10.1□□□□□ -0.79
GYPC-201ENST00000259254 RPL18AQ02543 176 aaKnown RBP10.1□□□□□ -0.79
GYPC-201ENST00000259254 LINC01620Q4KN68 170 aa10.09□□□□□ -0.79
GYPC-201ENST00000259254 C9orf163Q8N9P6 203 aa10.09□□□□□ -0.79
GYPC-201ENST00000259254 LOC107984640A0A0U1RRK4 108 aa10.08□□□□□ -0.8
GYPC-201ENST00000259254 NDUFC2-KCTD14E9PQ53 114 aa10.08□□□□□ -0.8
GYPC-201ENST00000259254 TIMM17BO60830 172 aa10.08□□□□□ -0.8
GYPC-201ENST00000259254 HNRNPA3P51991 378 aaKnown RBP10.08□□□□□ -0.8
GYPC-201ENST00000259254 KRTAP10-2P60368 255 aa10.08□□□□□ -0.8
GYPC-201ENST00000259254 COX17Q14061 63 aa10.08□□□□□ -0.8
GYPC-201ENST00000259254 MIR7-3HGQ8N6C7 128 aa10.08□□□□□ -0.8
GYPC-201ENST00000259254 DAND5Q8N907 189 aa10.08□□□□□ -0.8
GYPC-201ENST00000259254 MIEN1Q9BRT3 115 aa10.08□□□□□ -0.8
GYPC-201ENST00000259254 PKIGQ9Y2B9 76 aa10.08□□□□□ -0.8
GYPC-201ENST00000259254 KIAA1109Q2LD37 5005 aa10.08□□□□□ -0.8
GYPC-201ENST00000259254 GAGE2EQ4V326 116 aa10.07□□□□□ -0.8
GYPC-201ENST00000259254 PGPEP1Q9NXJ5 209 aa10.07□□□□□ -0.8
GYPC-201ENST00000259254 GAGE2DQ9UEU5 116 aa10.07□□□□□ -0.8
GYPC-201ENST00000259254 GAGE2BQ13066 116 aa10.06□□□□□ -0.8
GYPC-201ENST00000259254 SRSF9Q13242 221 aaKnown RBP eCLIP10.06□□□□□ -0.8
GYPC-201ENST00000259254 ADAMTSL4-AS1Q5T5F5 129 aa10.06□□□□□ -0.8
GYPC-201ENST00000259254 C2orf91Q6ZV80 131 aa10.06□□□□□ -0.8
GYPC-201ENST00000259254 LITAFQ99732 161 aa10.06□□□□□ -0.8
GYPC-201ENST00000259254 NPC2P61916 151 aa10.05□□□□□ -0.8
GYPC-201ENST00000259254 Q6ZRP5 223 aa10.05□□□□□ -0.8
GYPC-201ENST00000259254 HIST1H4GQ99525 98 aa10.05□□□□□ -0.8
GYPC-201ENST00000259254 HIGD1BQ9P298 99 aa10.05□□□□□ -0.8
GYPC-201ENST00000259254 TLX1NBP0CAT3 122 aa10.04□□□□□ -0.8
GYPC-201ENST00000259254 IGKV2-24A0A0C4DH68 120 aa10.03□□□□□ -0.8
GYPC-201ENST00000259254 GCSHP23434 173 aa10.03□□□□□ -0.8
GYPC-201ENST00000259254 SPANXDQ9BXN6 97 aa10.03□□□□□ -0.8
GYPC-201ENST00000259254 SND1-IT1Q9HBX3 110 aa10.03□□□□□ -0.8
GYPC-201ENST00000259254 XAGE1AQ9HD64 81 aa10.03□□□□□ -0.8
GYPC-201ENST00000259254 SPANXB1Q9NS25 103 aaPredicted RBP10.03□□□□□ -0.8
GYPC-201ENST00000259254 SPANXCQ9NY87 97 aa10.03□□□□□ -0.8
GYPC-201ENST00000259254 SDIM1Q6ZPB5 146 aa10.02□□□□□ -0.81
GYPC-201ENST00000259254 A0A096LNI7 61 aa10.01□□□□□ -0.81
GYPC-201ENST00000259254 PTTG1IPP53801 180 aa10.01□□□□□ -0.81
GYPC-201ENST00000259254 Q6ZVH6 145 aa10.01□□□□□ -0.81
GYPC-201ENST00000259254 LINC00308Q8TCZ7 52 aa10.01□□□□□ -0.81
GYPC-201ENST00000259254 C16orf90A8MZG2 172 aa10□□□□□ -0.81
GYPC-201ENST00000259254 COPS9Q8WXC6 57 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms