RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 CEP250Q9BV73 2442 aa5.2□□□□□ -1.58
GPNMB-201ENST00000258733 CDKN2A-AS1Q9UH64 79 aa5.19□□□□□ -1.58
GPNMB-201ENST00000258733 DMDP11532 3685 aa5.19□□□□□ -1.58
GPNMB-201ENST00000258733 IGKV3D-15A0A087WSY6 115 aa5.19□□□□□ -1.58
GPNMB-201ENST00000258733 IGHV3-72A0A0B4J1Y9 119 aa5.19□□□□□ -1.58
GPNMB-201ENST00000258733 IGHV3-20A0A0C4DH32 117 aa5.19□□□□□ -1.58
GPNMB-201ENST00000258733 NDUFA4O00483 81 aa5.19□□□□□ -1.58
GPNMB-201ENST00000258733 VPS13AQ96RL7 3174 aa5.19□□□□□ -1.58
GPNMB-201ENST00000258733 J3QL48 77 aa5.18□□□□□ -1.58
GPNMB-201ENST00000258733 Q6ZR54 194 aa5.18□□□□□ -1.58
GPNMB-201ENST00000258733 FAM104AQ969W3 186 aa5.18□□□□□ -1.58
GPNMB-201ENST00000258733 TTTY12Q9BZ98 90 aa5.18□□□□□ -1.58
GPNMB-201ENST00000258733 CGB3P0DN86 165 aa5.18□□□□□ -1.58
GPNMB-201ENST00000258733 CGB7P0DN87 165 aa5.18□□□□□ -1.58
GPNMB-201ENST00000258733 WDR87Q6ZQQ6 2873 aa5.18□□□□□ -1.58
GPNMB-201ENST00000258733 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.18□□□□□ -1.58
GPNMB-201ENST00000258733 CCL3P10147 92 aa5.18□□□□□ -1.58
GPNMB-201ENST00000258733 IGLV5-39A0A0G2JS06 123 aa5.17□□□□□ -1.58
GPNMB-201ENST00000258733 LINC00612Q8N6U2 182 aa5.17□□□□□ -1.58
GPNMB-201ENST00000258733 LINC01558Q9Y6Z2 57 aa5.17□□□□□ -1.58
GPNMB-201ENST00000258733 KRTAP16-1A8MUX0 517 aa5.17□□□□□ -1.58
GPNMB-201ENST00000258733 IGLV1-47P01700 117 aa5.17□□□□□ -1.58
GPNMB-201ENST00000258733 APELAP0DMC3 54 aa5.17□□□□□ -1.58
GPNMB-201ENST00000258733 FRYLO94915 3013 aa5.16□□□□□ -1.58
GPNMB-201ENST00000258733 IGLV5-45A0A087WSX0 123 aa5.16□□□□□ -1.58
GPNMB-201ENST00000258733 ATP6V0E1O15342 81 aa5.16□□□□□ -1.58
GPNMB-201ENST00000258733 IGKV3-15P01624 115 aa5.16□□□□□ -1.58
GPNMB-201ENST00000258733 SMIM29Q86T20 159 aa5.16□□□□□ -1.58
GPNMB-201ENST00000258733 WFDC10AQ9H1F0 79 aa5.16□□□□□ -1.58
GPNMB-201ENST00000258733 FLNBO75369 2602 aaKnown RBP5.16□□□□□ -1.58
GPNMB-201ENST00000258733 I3L2K1 104 aa5.16□□□□□ -1.58
GPNMB-201ENST00000258733 C11orf71Q6IPW1 123 aa5.16□□□□□ -1.58
GPNMB-201ENST00000258733 PLA2G2DQ9UNK4 145 aa5.16□□□□□ -1.58
GPNMB-201ENST00000258733 ASXL3Q9C0F0 2248 aa5.16□□□□□ -1.58
GPNMB-201ENST00000258733 CNEP1R1Q8N9A8 125 aa5.15□□□□□ -1.58
GPNMB-201ENST00000258733 PLAC8Q9NZF1 115 aa5.15□□□□□ -1.58
GPNMB-201ENST00000258733 IGHV3OR16-8A0A075B7F1 116 aa5.15□□□□□ -1.59
GPNMB-201ENST00000258733 C17orf58Q2M2W7 97 aa5.15□□□□□ -1.59
GPNMB-201ENST00000258733 SPANXA2-OT1Q8N9U9 137 aa5.15□□□□□ -1.59
GPNMB-201ENST00000258733 ANKRD17O75179 2603 aaKnown RBP5.15□□□□□ -1.59
GPNMB-201ENST00000258733 TRGV2A0A075B6R0 118 aa5.14□□□□□ -1.59
GPNMB-201ENST00000258733 PLA2G2CQ5R387 149 aa5.14□□□□□ -1.59
GPNMB-201ENST00000258733 CDK2AP2O75956 126 aa5.14□□□□□ -1.59
GPNMB-201ENST00000258733 MUC7Q8TAX7 377 aa5.14□□□□□ -1.59
GPNMB-201ENST00000258733 DMXL1Q9Y485 3027 aa5.14□□□□□ -1.59
GPNMB-201ENST00000258733 NAV2Q8IVL1 2488 aa5.14□□□□□ -1.59
GPNMB-201ENST00000258733 WDFY4Q6ZS81 3184 aa5.14□□□□□ -1.59
GPNMB-201ENST00000258733 IGLV2-23P01705 113 aa5.14□□□□□ -1.59
GPNMB-201ENST00000258733 REG3GQ6UW15 175 aa5.14□□□□□ -1.59
GPNMB-201ENST00000258733 GAFA1Q96PS6 74 aa5.14□□□□□ -1.59
GPNMB-201ENST00000258733 CFAP47Q6ZTR5 3102 aa5.13□□□□□ -1.59
GPNMB-201ENST00000258733 ETDCA0A1B0GVM5 59 aa5.13□□□□□ -1.59
GPNMB-201ENST00000258733 LY6G6DO95868 133 aa5.13□□□□□ -1.59
GPNMB-201ENST00000258733 SPAG11BQ08648 103 aa5.13□□□□□ -1.59
GPNMB-201ENST00000258733 LINC00242Q5T6M2 205 aa5.13□□□□□ -1.59
GPNMB-201ENST00000258733 SPAG11AQ6PDA7 123 aa5.13□□□□□ -1.59
GPNMB-201ENST00000258733 RNASE3P12724 160 aaKnown RBP5.13□□□□□ -1.59
GPNMB-201ENST00000258733 MIR22HGQ0VDD5 57 aa5.13□□□□□ -1.59
GPNMB-201ENST00000258733 PRR9Q5T870 116 aa5.13□□□□□ -1.59
GPNMB-201ENST00000258733 HELZ2Q9BYK8 2649 aaKnown RBP5.12□□□□□ -1.59
GPNMB-201ENST00000258733 SEC61BP60468 96 aaKnown RBP5.12□□□□□ -1.59
GPNMB-201ENST00000258733 CNBPP62633 177 aaKnown RBP5.12□□□□□ -1.59
GPNMB-201ENST00000258733 COX7B2Q8TF08 81 aa5.12□□□□□ -1.59
GPNMB-201ENST00000258733 ZNRD1Q9P1U0 126 aa5.12□□□□□ -1.59
GPNMB-201ENST00000258733 M0QY20 66 aa5.12□□□□□ -1.59
GPNMB-201ENST00000258733 CMC4P56277 68 aaPredicted RBP5.12□□□□□ -1.59
GPNMB-201ENST00000258733 CACNA1EQ15878 2313 aa5.12□□□□□ -1.59
GPNMB-201ENST00000258733 ICE1Q9Y2F5 2266 aa5.12□□□□□ -1.59
GPNMB-201ENST00000258733 A0A1B0GW54 56 aa5.11□□□□□ -1.59
GPNMB-201ENST00000258733 CCL18P55774 89 aa5.11□□□□□ -1.59
GPNMB-201ENST00000258733 MRGPRG-AS1Q2M3A8 158 aa5.11□□□□□ -1.59
GPNMB-201ENST00000258733 ST20-AS1Q8NBB2 130 aa5.11□□□□□ -1.59
GPNMB-201ENST00000258733 FREM2Q5SZK8 3169 aa5.11□□□□□ -1.59
GPNMB-201ENST00000258733 A0A096LNT2 108 aa5.11□□□□□ -1.59
GPNMB-201ENST00000258733 IGLV1-44P01699 117 aa5.11□□□□□ -1.59
GPNMB-201ENST00000258733 DEFB114Q30KQ6 69 aa5.11□□□□□ -1.59
GPNMB-201ENST00000258733 C10orf25Q5T742 122 aa5.11□□□□□ -1.59
GPNMB-201ENST00000258733 EP300Q09472 2414 aaPredicted RBP5.11□□□□□ -1.59
GPNMB-201ENST00000258733 SMIM1B2RUZ4 78 aa5.1□□□□□ -1.59
GPNMB-201ENST00000258733 K7EIM0 57 aa5.1□□□□□ -1.59
GPNMB-201ENST00000258733 COA5Q86WW8 74 aa5.1□□□□□ -1.59
GPNMB-201ENST00000258733 P0C880 135 aa5.1□□□□□ -1.59
GPNMB-201ENST00000258733 IGHV1-2P23083 117 aa5.1□□□□□ -1.59
GPNMB-201ENST00000258733 TRBV6-4A0A1B0GX49 114 aa5.1□□□□□ -1.59
GPNMB-201ENST00000258733 SRRM5B3KS81 715 aa5.1□□□□□ -1.59
GPNMB-201ENST00000258733 COX6A2Q02221 97 aa5.1□□□□□ -1.59
GPNMB-201ENST00000258733 ZFAND2AQ8N6M9 145 aa5.1□□□□□ -1.59
GPNMB-201ENST00000258733 LENEPQ9Y5L5 61 aa5.1□□□□□ -1.59
GPNMB-201ENST00000258733 MYO18BQ8IUG5 2567 aa5.09□□□□□ -1.59
GPNMB-201ENST00000258733 IGSF10Q6WRI0 2623 aa5.08□□□□□ -1.6
GPNMB-201ENST00000258733 LINC00158P58513 81 aa5.08□□□□□ -1.6
GPNMB-201ENST00000258733 DEFB112Q30KQ8 113 aa5.08□□□□□ -1.6
GPNMB-201ENST00000258733 IGLV9-49A0A0B4J1Y8 123 aa5.08□□□□□ -1.6
GPNMB-201ENST00000258733 XAGE1AQ9HD64 81 aa5.08□□□□□ -1.6
GPNMB-201ENST00000258733 ODF3L2Q3SX64 289 aa5.07□□□□□ -1.6
GPNMB-201ENST00000258733 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.07□□□□□ -1.6
GPNMB-201ENST00000258733 ZFYVE26Q68DK2 2539 aa5.07□□□□□ -1.6
GPNMB-201ENST00000258733 Q8NDZ9 215 aa5.07□□□□□ -1.6
GPNMB-201ENST00000258733 TENM4Q6N022 2769 aa5.07□□□□□ -1.6
GPNMB-201ENST00000258733 SPINK14Q6IE38 97 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms