RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ATRQ13535 2644 aa13.48□□□□□ -0.25
CDC42EP1-201ENST00000249014 CRPP02741 224 aa13.47□□□□□ -0.25
CDC42EP1-201ENST00000249014 Q8N3U1 123 aa13.47□□□□□ -0.25
CDC42EP1-201ENST00000249014 TRRAPQ9Y4A5 3859 aa13.47□□□□□ -0.25
CDC42EP1-201ENST00000249014 TRAV8-4A0A0B4J246 113 aa13.47□□□□□ -0.25
CDC42EP1-201ENST00000249014 C6orf226Q5I0X4 101 aa13.47□□□□□ -0.25
CDC42EP1-201ENST00000249014 TEP1Q99973 2627 aaKnown RBP13.46□□□□□ -0.25
CDC42EP1-201ENST00000249014 Q8NAQ8 132 aa13.46□□□□□ -0.25
CDC42EP1-201ENST00000249014 DAD1P61803 113 aa13.45□□□□□ -0.26
CDC42EP1-201ENST00000249014 RPL28P46779 137 aaKnown RBP13.45□□□□□ -0.26
CDC42EP1-201ENST00000249014 LINC00269Q8N2A0 174 aa13.45□□□□□ -0.26
CDC42EP1-201ENST00000249014 DEFB121Q5J5C9 76 aa13.44□□□□□ -0.26
CDC42EP1-201ENST00000249014 TRAV26-1A0A087WT03 109 aa13.43□□□□□ -0.26
CDC42EP1-201ENST00000249014 TRACP01848 142 aa13.43□□□□□ -0.26
CDC42EP1-201ENST00000249014 Q8IZM0 81 aa13.42□□□□□ -0.26
CDC42EP1-201ENST00000249014 SMIM11BQ8TCY0 68 aa13.41□□□□□ -0.26
CDC42EP1-201ENST00000249014 ATP5G1P05496 136 aa13.41□□□□□ -0.26
CDC42EP1-201ENST00000249014 MIFP14174 115 aa13.41□□□□□ -0.26
CDC42EP1-201ENST00000249014 IGLV10-54A0A075B6I4 117 aa13.39□□□□□ -0.27
CDC42EP1-201ENST00000249014 ANGP03950 147 aaKnown RBP13.39□□□□□ -0.27
CDC42EP1-201ENST00000249014 WFDC9Q8NEX5 89 aa13.39□□□□□ -0.27
CDC42EP1-201ENST00000249014 IGHV4-30-4P0DP06 118 aa13.39□□□□□ -0.27
CDC42EP1-201ENST00000249014 LINC01561Q8N1V8 128 aa13.39□□□□□ -0.27
CDC42EP1-201ENST00000249014 C22orf24Q9Y442 160 aa13.39□□□□□ -0.27
CDC42EP1-201ENST00000249014 CKS1BP61024 79 aa13.38□□□□□ -0.27
CDC42EP1-201ENST00000249014 REG3AQ06141 175 aa13.38□□□□□ -0.27
CDC42EP1-201ENST00000249014 CD164L2Q6UWJ8 174 aa13.38□□□□□ -0.27
CDC42EP1-201ENST00000249014 CHCHD10Q8WYQ3 142 aaPredicted RBP13.38□□□□□ -0.27
CDC42EP1-201ENST00000249014 BAALC-AS2P0C853 105 aa13.38□□□□□ -0.27
CDC42EP1-201ENST00000249014 KIAA0087Q14695 138 aa13.38□□□□□ -0.27
CDC42EP1-201ENST00000249014 HTN3P15516 51 aa13.37□□□□□ -0.27
CDC42EP1-201ENST00000249014 Q9HAA7 133 aa13.37□□□□□ -0.27
CDC42EP1-201ENST00000249014 SPART-AS1P0CW21 52 aa13.37□□□□□ -0.27
CDC42EP1-201ENST00000249014 A0A1B0GV72 72 aa13.36□□□□□ -0.27
CDC42EP1-201ENST00000249014 WIPF1O43516 503 aa13.35□□□□□ -0.27
CDC42EP1-201ENST00000249014 SNCGO76070 127 aa13.35□□□□□ -0.27
CDC42EP1-201ENST00000249014 A0A087WYN8 130 aa13.35□□□□□ -0.27
CDC42EP1-201ENST00000249014 FAM240AA0A1B0GVK7 77 aa13.35□□□□□ -0.27
CDC42EP1-201ENST00000249014 C15orf53Q8NAA6 179 aa13.35□□□□□ -0.27
CDC42EP1-201ENST00000249014 MRPL23Q16540 153 aaKnown RBP13.34□□□□□ -0.27
CDC42EP1-201ENST00000249014 OR13C6PQ8NH95 151 aa13.33□□□□□ -0.28
CDC42EP1-201ENST00000249014 MALP21145 153 aa13.31□□□□□ -0.28
CDC42EP1-201ENST00000249014 TTC32Q5I0X7 151 aa13.31□□□□□ -0.28
CDC42EP1-201ENST00000249014 LELP1Q5T871 98 aa13.31□□□□□ -0.28
CDC42EP1-201ENST00000249014 CFAP161Q6P656 301 aa13.31□□□□□ -0.28
CDC42EP1-201ENST00000249014 C9orf116Q5BN46 136 aaPredicted RBP13.3□□□□□ -0.28
CDC42EP1-201ENST00000249014 PRR3P79522 188 aaKnown RBP13.3□□□□□ -0.28
CDC42EP1-201ENST00000249014 GAGE2BQ13066 116 aa13.3□□□□□ -0.28
CDC42EP1-201ENST00000249014 GAGE2EQ4V326 116 aa13.3□□□□□ -0.28
CDC42EP1-201ENST00000249014 GAGE2DQ9UEU5 116 aa13.3□□□□□ -0.28
CDC42EP1-201ENST00000249014 H0YGX0 51 aa13.29□□□□□ -0.28
CDC42EP1-201ENST00000249014 CXCL5P42830 114 aa13.29□□□□□ -0.28
CDC42EP1-201ENST00000249014 COX17Q14061 63 aa13.28□□□□□ -0.28
CDC42EP1-201ENST00000249014 SVIPQ8NHG7 77 aa13.28□□□□□ -0.28
CDC42EP1-201ENST00000249014 DNAL4O96015 105 aa13.27□□□□□ -0.29
CDC42EP1-201ENST00000249014 OXLD1Q5BKU9 147 aa13.27□□□□□ -0.29
CDC42EP1-201ENST00000249014 LECT2O14960 151 aa13.25□□□□□ -0.29
CDC42EP1-201ENST00000249014 NANOS2P60321 138 aaKnown RBP13.25□□□□□ -0.29
CDC42EP1-201ENST00000249014 KLK12Q9UKR0 248 aa13.25□□□□□ -0.29
CDC42EP1-201ENST00000249014 C6orf223Q8N319 242 aa13.25□□□□□ -0.29
CDC42EP1-201ENST00000249014 PRR34Q9NV39 138 aa13.25□□□□□ -0.29
CDC42EP1-201ENST00000249014 C9orf129Q5T035 196 aaKnown RBP13.24□□□□□ -0.29
CDC42EP1-201ENST00000249014 Q6Q795 121 aa13.24□□□□□ -0.29
CDC42EP1-201ENST00000249014 RETNQ9HD89 108 aa13.24□□□□□ -0.29
CDC42EP1-201ENST00000249014 ACYP1P07311 99 aa13.24□□□□□ -0.29
CDC42EP1-201ENST00000249014 KRTAP10-11P60412 298 aa13.24□□□□□ -0.29
CDC42EP1-201ENST00000249014 C10orf25Q5T742 122 aa13.24□□□□□ -0.29
CDC42EP1-201ENST00000249014 LYPD5Q6UWN5 251 aa13.23□□□□□ -0.29
CDC42EP1-201ENST00000249014 ENHOQ6UWT2 76 aa13.23□□□□□ -0.29
CDC42EP1-201ENST00000249014 Q8NDZ9 215 aa13.23□□□□□ -0.29
CDC42EP1-201ENST00000249014 LINC00526Q96FQ7 95 aa13.23□□□□□ -0.29
CDC42EP1-201ENST00000249014 KLK5Q9Y337 293 aaPredicted RBP13.23□□□□□ -0.29
CDC42EP1-201ENST00000249014 NDUFC2O95298 119 aa13.22□□□□□ -0.29
CDC42EP1-201ENST00000249014 UNQ6190/PRO20217Q6UXQ8 127 aa13.22□□□□□ -0.29
CDC42EP1-201ENST00000249014 SMCR5Q8TEV8 140 aa13.22□□□□□ -0.29
CDC42EP1-201ENST00000249014 ANAPC13Q9BS18 74 aa13.22□□□□□ -0.29
CDC42EP1-201ENST00000249014 SPAG11BQ08648 103 aa13.21□□□□□ -0.29
CDC42EP1-201ENST00000249014 SLPIP03973 132 aa13.21□□□□□ -0.3
CDC42EP1-201ENST00000249014 NHLRC4P0CG21 123 aaPredicted RBP13.2□□□□□ -0.3
CDC42EP1-201ENST00000249014 INAFM2P0DMQ5 153 aa13.2□□□□□ -0.3
CDC42EP1-201ENST00000249014 NDUFV3P56181 108 aaKnown RBP13.2□□□□□ -0.3
CDC42EP1-201ENST00000249014 F8P00451 2351 aa13.18□□□□□ -0.3
CDC42EP1-201ENST00000249014 CYSRT1A8MQ03 144 aa13.18□□□□□ -0.3
CDC42EP1-201ENST00000249014 NCR3O14931 201 aa13.17□□□□□ -0.3
CDC42EP1-201ENST00000249014 TMEM126AQ9H061 195 aa13.17□□□□□ -0.3
CDC42EP1-201ENST00000249014 GAGE2AQ6NT46 116 aa13.17□□□□□ -0.3
CDC42EP1-201ENST00000249014 SDIM1Q6ZPB5 146 aa13.17□□□□□ -0.3
CDC42EP1-201ENST00000249014 OBSCN-AS1Q96MR7 158 aa13.17□□□□□ -0.3
CDC42EP1-201ENST00000249014 A0A0J9YWU9 116 aa13.15□□□□□ -0.3
CDC42EP1-201ENST00000249014 TRBV7-7A0A0K0K1E9 115 aa13.15□□□□□ -0.3
CDC42EP1-201ENST00000249014 KPRPQ5T749 579 aaPredicted RBP13.15□□□□□ -0.3
CDC42EP1-201ENST00000249014 C14orf132Q9NPU4 83 aa13.15□□□□□ -0.3
CDC42EP1-201ENST00000249014 ANK2Q01484 3957 aa13.15□□□□□ -0.3
CDC42EP1-201ENST00000249014 WFDC10BQ8IUB3 73 aa13.15□□□□□ -0.3
CDC42EP1-201ENST00000249014 PKD1L1Q8TDX9 2849 aa13.15□□□□□ -0.3
CDC42EP1-201ENST00000249014 Q6ZTC4 211 aa13.14□□□□□ -0.31
CDC42EP1-201ENST00000249014 KRTAP24-1Q3LI83 254 aa13.13□□□□□ -0.31
CDC42EP1-201ENST00000249014 ORMDL1Q9P0S3 153 aa13.13□□□□□ -0.31
CDC42EP1-201ENST00000249014 LINC00167Q96N53 147 aa13.13□□□□□ -0.31
CDC42EP1-201ENST00000249014 LINC00643Q86TS7 51 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms