RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 ZFHX4Q86UP3 3567 aa6.67□□□□□ -1.34
COL21A1-201ENST00000244728 DEFB131BA0A096LNP1 70 aa6.67□□□□□ -1.34
COL21A1-201ENST00000244728 IGKV2-24A0A0C4DH68 120 aa6.67□□□□□ -1.34
COL21A1-201ENST00000244728 SMIM1B2RUZ4 78 aa6.67□□□□□ -1.34
COL21A1-201ENST00000244728 UBR5O95071 2799 aaPredicted RBP6.67□□□□□ -1.34
COL21A1-201ENST00000244728 ZNF575Q86XF7 245 aa6.67□□□□□ -1.34
COL21A1-201ENST00000244728 SMIM11BQ8TCY0 68 aa6.67□□□□□ -1.34
COL21A1-201ENST00000244728 KLK5Q9Y337 293 aaPredicted RBP6.66□□□□□ -1.34
COL21A1-201ENST00000244728 SHISA2Q6UWI4 295 aa6.66□□□□□ -1.34
COL21A1-201ENST00000244728 C20orf197Q8N268 126 aa6.66□□□□□ -1.34
COL21A1-201ENST00000244728 COL6A5A8TX70 2615 aa6.66□□□□□ -1.34
COL21A1-201ENST00000244728 ETDCA0A1B0GVM5 59 aa6.65□□□□□ -1.34
COL21A1-201ENST00000244728 USP17L23D6RBM5 183 aa6.65□□□□□ -1.34
COL21A1-201ENST00000244728 TRBV6-4A0A1B0GX49 114 aa6.65□□□□□ -1.34
COL21A1-201ENST00000244728 RBM3P98179 157 aaKnown RBP6.65□□□□□ -1.34
COL21A1-201ENST00000244728 C1orf158Q8N1D5 194 aa6.65□□□□□ -1.34
COL21A1-201ENST00000244728 Q9UF83 564 aa6.65□□□□□ -1.34
COL21A1-201ENST00000244728 TMEM256-PLSCR3K7ERE1 68 aa6.65□□□□□ -1.35
COL21A1-201ENST00000244728 IBA57-AS1B1ANH7 110 aa6.64□□□□□ -1.35
COL21A1-201ENST00000244728 SERP2Q8N6R1 65 aa6.64□□□□□ -1.35
COL21A1-201ENST00000244728 CDC42SE2Q9NRR3 84 aa6.64□□□□□ -1.35
COL21A1-201ENST00000244728 IGSF10Q6WRI0 2623 aa6.64□□□□□ -1.35
COL21A1-201ENST00000244728 A0A087WVE0 104 aa6.64□□□□□ -1.35
COL21A1-201ENST00000244728 LYRM9A8MSI8 78 aa6.64□□□□□ -1.35
COL21A1-201ENST00000244728 GCN1Q92616 2671 aaKnown RBP6.64□□□□□ -1.35
COL21A1-201ENST00000244728 TRBV7-7A0A0K0K1E9 115 aa6.64□□□□□ -1.35
COL21A1-201ENST00000244728 SMIM9A6NGZ8 99 aa6.64□□□□□ -1.35
COL21A1-201ENST00000244728 CXCL5P42830 114 aa6.64□□□□□ -1.35
COL21A1-201ENST00000244728 ENHOQ6UWT2 76 aa6.63□□□□□ -1.35
COL21A1-201ENST00000244728 Q8N2B8 174 aa6.63□□□□□ -1.35
COL21A1-201ENST00000244728 RETNQ9HD89 108 aa6.63□□□□□ -1.35
COL21A1-201ENST00000244728 IGHV4-30-4P0DP06 118 aa6.63□□□□□ -1.35
COL21A1-201ENST00000244728 BRI3O95415 125 aa6.63□□□□□ -1.35
COL21A1-201ENST00000244728 NHLRC4P0CG21 123 aaPredicted RBP6.62□□□□□ -1.35
COL21A1-201ENST00000244728 UPK3BQ9BT76 320 aa6.62□□□□□ -1.35
COL21A1-201ENST00000244728 IGLV1-51P01701 117 aa6.62□□□□□ -1.35
COL21A1-201ENST00000244728 PPDPFQ9H3Y8 114 aa6.62□□□□□ -1.35
COL21A1-201ENST00000244728 LOC400499M0QZD8 3231 aa6.62□□□□□ -1.35
COL21A1-201ENST00000244728 A0A087WYN8 130 aa6.62□□□□□ -1.35
COL21A1-201ENST00000244728 LOC107984640A0A0U1RRK4 108 aa6.62□□□□□ -1.35
COL21A1-201ENST00000244728 MIFP14174 115 aa6.62□□□□□ -1.35
COL21A1-201ENST00000244728 SPENQ96T58 3664 aaKnown RBP6.61□□□□□ -1.35
COL21A1-201ENST00000244728 RPL28P46779 137 aaKnown RBP6.61□□□□□ -1.35
COL21A1-201ENST00000244728 C5orf47Q569G3 176 aa6.61□□□□□ -1.35
COL21A1-201ENST00000244728 KPRPQ5T749 579 aaPredicted RBP6.61□□□□□ -1.35
COL21A1-201ENST00000244728 WFDC9Q8NEX5 89 aa6.61□□□□□ -1.35
COL21A1-201ENST00000244728 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.61□□□□□ -1.35
COL21A1-201ENST00000244728 CDK2AP2O75956 126 aa6.61□□□□□ -1.35
COL21A1-201ENST00000244728 A0A096LNI7 61 aa6.61□□□□□ -1.35
COL21A1-201ENST00000244728 ITPR1Q14643 2758 aa6.6□□□□□ -1.35
COL21A1-201ENST00000244728 TMEM258P61165 79 aa6.6□□□□□ -1.35
COL21A1-201ENST00000244728 LITAFQ99732 161 aa6.6□□□□□ -1.35
COL21A1-201ENST00000244728 C6orf99Q4VX62 202 aa6.6□□□□□ -1.35
COL21A1-201ENST00000244728 Q6JHZ5 121 aa6.6□□□□□ -1.35
COL21A1-201ENST00000244728 IGLV4-60A0A075B6I1 120 aa6.59□□□□□ -1.35
COL21A1-201ENST00000244728 LINC00959A0A1B0GUT2 108 aa6.59□□□□□ -1.35
COL21A1-201ENST00000244728 NANOS2P60321 138 aaKnown RBP6.59□□□□□ -1.35
COL21A1-201ENST00000244728 NBEAL2Q6ZNJ1 2754 aa6.59□□□□□ -1.35
COL21A1-201ENST00000244728 KLK9Q2XQG4 91 aa6.59□□□□□ -1.35
COL21A1-201ENST00000244728 SOSTDC1Q6X4U4 206 aa6.59□□□□□ -1.35
COL21A1-201ENST00000244728 LINC00337Q8N6G1 96 aa6.59□□□□□ -1.35
COL21A1-201ENST00000244728 DIRC1Q969H9 104 aa6.59□□□□□ -1.35
COL21A1-201ENST00000244728 EIF4EBP3O60516 100 aaPredicted RBP6.58□□□□□ -1.36
COL21A1-201ENST00000244728 HIGD2AQ9BW72 106 aa6.58□□□□□ -1.36
COL21A1-201ENST00000244728 IGLV5-39A0A0G2JS06 123 aa6.58□□□□□ -1.36
COL21A1-201ENST00000244728 C9orf116Q5BN46 136 aaPredicted RBP6.58□□□□□ -1.36
COL21A1-201ENST00000244728 FAM19A5Q7Z5A7 132 aaPredicted RBP6.58□□□□□ -1.36
COL21A1-201ENST00000244728 LINC00846Q9NV44 126 aa6.58□□□□□ -1.36
COL21A1-201ENST00000244728 ZFHX3Q15911 3703 aa6.58□□□□□ -1.36
COL21A1-201ENST00000244728 BEAN1Q3B7T3 259 aa6.57□□□□□ -1.36
COL21A1-201ENST00000244728 ATP5EP2Q5VTU8 51 aa6.57□□□□□ -1.36
COL21A1-201ENST00000244728 FAM218AQ96MZ4 157 aa6.57□□□□□ -1.36
COL21A1-201ENST00000244728 FAM236DA0A1B0GTK5 79 aa6.57□□□□□ -1.36
COL21A1-201ENST00000244728 FAM236CP0DP71 79 aa6.57□□□□□ -1.36
COL21A1-201ENST00000244728 SCXQ7RTU7 201 aa6.57□□□□□ -1.36
COL21A1-201ENST00000244728 A0A0J9YWU9 116 aa6.57□□□□□ -1.36
COL21A1-201ENST00000244728 CSDC2Q9Y534 153 aaKnown RBP6.57□□□□□ -1.36
COL21A1-201ENST00000244728 PRR3P79522 188 aaKnown RBP6.56□□□□□ -1.36
COL21A1-201ENST00000244728 M0R2N4 97 aa6.56□□□□□ -1.36
COL21A1-201ENST00000244728 UNC79Q9P2D8 2635 aa6.56□□□□□ -1.36
COL21A1-201ENST00000244728 IGKV2-28A0A075B6P5 120 aa6.56□□□□□ -1.36
COL21A1-201ENST00000244728 IGKV2D-28P01615 120 aa6.56□□□□□ -1.36
COL21A1-201ENST00000244728 CD164L2Q6UWJ8 174 aa6.55□□□□□ -1.36
COL21A1-201ENST00000244728 LRBAP50851 2863 aa6.55□□□□□ -1.36
COL21A1-201ENST00000244728 UNQ6190/PRO20217Q6UXQ8 127 aa6.55□□□□□ -1.36
COL21A1-201ENST00000244728 C11orf72Q8NBR9 251 aa6.55□□□□□ -1.36
COL21A1-201ENST00000244728 BAHCC1Q9P281 2608 aa6.55□□□□□ -1.36
COL21A1-201ENST00000244728 ASH1LQ9NR48 2969 aaKnown RBP6.55□□□□□ -1.36
COL21A1-201ENST00000244728 IGLV5-45A0A087WSX0 123 aa6.54□□□□□ -1.36
COL21A1-201ENST00000244728 CCKP06307 115 aa6.54□□□□□ -1.36
COL21A1-201ENST00000244728 FUSP35637 526 aaKnown RBP eCLIP6.54□□□□□ -1.36
COL21A1-201ENST00000244728 FHL2Q14192 279 aa6.54□□□□□ -1.36
COL21A1-201ENST00000244728 DMXL1Q9Y485 3027 aa6.54□□□□□ -1.36
COL21A1-201ENST00000244728 NDUFC2O95298 119 aa6.54□□□□□ -1.36
COL21A1-201ENST00000244728 COX7BP24311 80 aa6.54□□□□□ -1.36
COL21A1-201ENST00000244728 NREPQ16612 68 aa6.54□□□□□ -1.36
COL21A1-201ENST00000244728 NTM-AS1Q6ZSK4 140 aa6.54□□□□□ -1.36
COL21A1-201ENST00000244728 Q6ZTC4 211 aa6.54□□□□□ -1.36
COL21A1-201ENST00000244728 KIR2DL5BQ8NHK3 375 aa6.54□□□□□ -1.36
COL21A1-201ENST00000244728 UBE2AP49459 152 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms