RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 BAALC-AS2P0C853 105 aa10.02□□□□□ -0.81
HIF3A-202ENST00000244303 FAM222AQ5U5X8 452 aa10.02□□□□□ -0.81
HIF3A-202ENST00000244303 RPL28P46779 137 aaKnown RBP10□□□□□ -0.81
HIF3A-202ENST00000244303 SPATA3Q8NHX4 192 aa10□□□□□ -0.81
HIF3A-202ENST00000244303 X6R8D5 127 aa10□□□□□ -0.81
HIF3A-202ENST00000244303 PFN2P35080 140 aa10□□□□□ -0.81
HIF3A-202ENST00000244303 CCL18P55774 89 aa10□□□□□ -0.81
HIF3A-202ENST00000244303 C3orf56Q8N813 242 aa10□□□□□ -0.81
HIF3A-202ENST00000244303 NBEAL2Q6ZNJ1 2754 aa9.99□□□□□ -0.81
HIF3A-202ENST00000244303 IBA57-AS1B1ANH7 110 aa9.99□□□□□ -0.81
HIF3A-202ENST00000244303 IMUPQ9GZP8 106 aa9.99□□□□□ -0.81
HIF3A-202ENST00000244303 A0A096LPF7 62 aa9.99□□□□□ -0.81
HIF3A-202ENST00000244303 C11orf68Q9H3H3 251 aaKnown RBP9.99□□□□□ -0.81
HIF3A-202ENST00000244303 XCL1P47992 114 aa9.98□□□□□ -0.81
HIF3A-202ENST00000244303 LINC00643Q86TS7 51 aa9.98□□□□□ -0.81
HIF3A-202ENST00000244303 SMCR5Q8TEV8 140 aa9.98□□□□□ -0.81
HIF3A-202ENST00000244303 CLPSL2Q6UWE3 100 aa9.98□□□□□ -0.81
HIF3A-202ENST00000244303 C22orf24Q9Y442 160 aa9.98□□□□□ -0.81
HIF3A-202ENST00000244303 VWFP04275 2813 aa9.97□□□□□ -0.81
HIF3A-202ENST00000244303 C9orf66Q5T8R8 295 aa9.97□□□□□ -0.81
HIF3A-202ENST00000244303 SMIM11BQ8TCY0 68 aa9.97□□□□□ -0.81
HIF3A-202ENST00000244303 Q9HAA7 133 aa9.97□□□□□ -0.81
HIF3A-202ENST00000244303 OTOGQ6ZRI0 2925 aa9.97□□□□□ -0.81
HIF3A-202ENST00000244303 C6orf226Q5I0X4 101 aa9.96□□□□□ -0.81
HIF3A-202ENST00000244303 GAGE2AQ6NT46 116 aa9.96□□□□□ -0.81
HIF3A-202ENST00000244303 PRO0255Q9UI72 69 aa9.96□□□□□ -0.81
HIF3A-202ENST00000244303 A0A1B0GUV1 79 aa9.96□□□□□ -0.82
HIF3A-202ENST00000244303 SS18Q15532 418 aa9.96□□□□□ -0.82
HIF3A-202ENST00000244303 SMIM9A6NGZ8 99 aa9.95□□□□□ -0.82
HIF3A-202ENST00000244303 INAFM2P0DMQ5 153 aa9.95□□□□□ -0.82
HIF3A-202ENST00000244303 TMEM126AQ9H061 195 aa9.95□□□□□ -0.82
HIF3A-202ENST00000244303 A0A087WYN8 130 aa9.94□□□□□ -0.82
HIF3A-202ENST00000244303 PAX4O43316 350 aa9.94□□□□□ -0.82
HIF3A-202ENST00000244303 DEFB4AO15263 64 aa9.93□□□□□ -0.82
HIF3A-202ENST00000244303 MALP21145 153 aa9.93□□□□□ -0.82
HIF3A-202ENST00000244303 DNAL4O96015 105 aa9.93□□□□□ -0.82
HIF3A-202ENST00000244303 C9orf153Q5TBE3 101 aa9.93□□□□□ -0.82
HIF3A-202ENST00000244303 Q8IZM0 81 aa9.93□□□□□ -0.82
HIF3A-202ENST00000244303 DEFB135Q30KP9 77 aa9.92□□□□□ -0.82
HIF3A-202ENST00000244303 OR13C6PQ8NH95 151 aa9.91□□□□□ -0.82
HIF3A-202ENST00000244303 NSD1Q96L73 2696 aaPredicted RBP9.91□□□□□ -0.82
HIF3A-202ENST00000244303 LYRM9A8MSI8 78 aa9.91□□□□□ -0.82
HIF3A-202ENST00000244303 LINC00269Q8N2A0 174 aa9.9□□□□□ -0.82
HIF3A-202ENST00000244303 C3orf22Q8N5N4 141 aa9.9□□□□□ -0.82
HIF3A-202ENST00000244303 H0YGX0 51 aa9.9□□□□□ -0.83
HIF3A-202ENST00000244303 ATP5G1P05496 136 aa9.9□□□□□ -0.83
HIF3A-202ENST00000244303 Q8N3U1 123 aa9.9□□□□□ -0.83
HIF3A-202ENST00000244303 CXCL5P42830 114 aa9.89□□□□□ -0.83
HIF3A-202ENST00000244303 CFAP161Q6P656 301 aa9.89□□□□□ -0.83
HIF3A-202ENST00000244303 SDIM1Q6ZPB5 146 aa9.89□□□□□ -0.83
HIF3A-202ENST00000244303 UQCRQO14949 82 aa9.88□□□□□ -0.83
HIF3A-202ENST00000244303 LINC01561Q8N1V8 128 aa9.88□□□□□ -0.83
HIF3A-202ENST00000244303 HIVEP1P15822 2718 aa9.88□□□□□ -0.83
HIF3A-202ENST00000244303 IGLV10-54A0A075B6I4 117 aa9.87□□□□□ -0.83
HIF3A-202ENST00000244303 IGHV4-28A0A0C4DH34 117 aa9.87□□□□□ -0.83
HIF3A-202ENST00000244303 LECT2O14960 151 aa9.87□□□□□ -0.83
HIF3A-202ENST00000244303 C9orf129Q5T035 196 aaKnown RBP9.87□□□□□ -0.83
HIF3A-202ENST00000244303 CD164L2Q6UWJ8 174 aa9.87□□□□□ -0.83
HIF3A-202ENST00000244303 TENM1Q9UKZ4 2725 aa9.87□□□□□ -0.83
HIF3A-202ENST00000244303 ANGP03950 147 aaKnown RBP9.86□□□□□ -0.83
HIF3A-202ENST00000244303 DAD1P61803 113 aa9.86□□□□□ -0.83
HIF3A-202ENST00000244303 KIAA0087Q14695 138 aa9.86□□□□□ -0.83
HIF3A-202ENST00000244303 CHCHD10Q8WYQ3 142 aaPredicted RBP9.86□□□□□ -0.83
HIF3A-202ENST00000244303 C14orf132Q9NPU4 83 aa9.86□□□□□ -0.83
HIF3A-202ENST00000244303 CELA1Q9UNI1 258 aa9.86□□□□□ -0.83
HIF3A-202ENST00000244303 APOC4P55056 127 aa9.85□□□□□ -0.83
HIF3A-202ENST00000244303 REG3AQ06141 175 aa9.85□□□□□ -0.83
HIF3A-202ENST00000244303 PRR3P79522 188 aaKnown RBP9.84□□□□□ -0.83
HIF3A-202ENST00000244303 WFDC9Q8NEX5 89 aa9.84□□□□□ -0.83
HIF3A-202ENST00000244303 LINC00526Q96FQ7 95 aa9.84□□□□□ -0.83
HIF3A-202ENST00000244303 SLPIP03973 132 aa9.84□□□□□ -0.83
HIF3A-202ENST00000244303 COX7CP15954 63 aa9.82□□□□□ -0.84
HIF3A-202ENST00000244303 C9orf116Q5BN46 136 aaPredicted RBP9.82□□□□□ -0.84
HIF3A-202ENST00000244303 Q8NAQ8 132 aa9.82□□□□□ -0.84
HIF3A-202ENST00000244303 NANOS2P60321 138 aaKnown RBP9.82□□□□□ -0.84
HIF3A-202ENST00000244303 COX17Q14061 63 aa9.82□□□□□ -0.84
HIF3A-202ENST00000244303 TRRAPQ9Y4A5 3859 aa9.82□□□□□ -0.84
HIF3A-202ENST00000244303 ATOX1O00244 68 aa9.81□□□□□ -0.84
HIF3A-202ENST00000244303 IGKV3D-7A0A0C4DH55 119 aa9.81□□□□□ -0.84
HIF3A-202ENST00000244303 OBSCN-AS1Q96MR7 158 aa9.81□□□□□ -0.84
HIF3A-202ENST00000244303 HTN3P15516 51 aa9.8□□□□□ -0.84
HIF3A-202ENST00000244303 NCR3O14931 201 aa9.8□□□□□ -0.84
HIF3A-202ENST00000244303 NDUFC2O95298 119 aa9.8□□□□□ -0.84
HIF3A-202ENST00000244303 MIFP14174 115 aa9.8□□□□□ -0.84
HIF3A-202ENST00000244303 WIPF1O43516 503 aa9.79□□□□□ -0.84
HIF3A-202ENST00000244303 ORMDL1Q9P0S3 153 aa9.79□□□□□ -0.84
HIF3A-202ENST00000244303 KLK5Q9Y337 293 aaPredicted RBP9.79□□□□□ -0.84
HIF3A-202ENST00000244303 ATRQ13535 2644 aa9.79□□□□□ -0.84
HIF3A-202ENST00000244303 LINC00846Q9NV44 126 aa9.79□□□□□ -0.84
HIF3A-202ENST00000244303 TEP1Q99973 2627 aaKnown RBP9.78□□□□□ -0.84
HIF3A-202ENST00000244303 SPART-AS1P0CW21 52 aa9.77□□□□□ -0.84
HIF3A-202ENST00000244303 IGHV4-30-4P0DP06 118 aa9.77□□□□□ -0.84
HIF3A-202ENST00000244303 C6orf223Q8N319 242 aa9.77□□□□□ -0.84
HIF3A-202ENST00000244303 Q8NDZ9 215 aa9.77□□□□□ -0.84
HIF3A-202ENST00000244303 HIST1H4AP62805 103 aaKnown RBP9.77□□□□□ -0.85
HIF3A-202ENST00000244303 RPL18AQ02543 176 aaKnown RBP9.77□□□□□ -0.85
HIF3A-202ENST00000244303 LELP1Q5T871 98 aa9.77□□□□□ -0.85
HIF3A-202ENST00000244303 C2orf48Q96LS8 159 aa9.77□□□□□ -0.85
HIF3A-202ENST00000244303 A0A1B0GX51 115 aa9.76□□□□□ -0.85
HIF3A-202ENST00000244303 C10orf25Q5T742 122 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms