RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 A0A087WYN8 130 aa8.74□□□□□ -1.01
DDX39A-201ENST00000242776 A0A0J9YXV3 536 aa8.74□□□□□ -1.01
DDX39A-201ENST00000242776 C20orf202A1L168 122 aa8.74□□□□□ -1.01
DDX39A-201ENST00000242776 IGLC3P0DOY3 106 aa8.74□□□□□ -1.01
DDX39A-201ENST00000242776 hDV102S1A0JD36 115 aa8.73□□□□□ -1.01
DDX39A-201ENST00000242776 MRPL35Q9NZE8 188 aaKnown RBP8.73□□□□□ -1.01
DDX39A-201ENST00000242776 IGLV4-69A0A075B6H9 119 aa8.72□□□□□ -1.01
DDX39A-201ENST00000242776 COX7A2LO14548 114 aa8.72□□□□□ -1.01
DDX39A-201ENST00000242776 MALP21145 153 aa8.72□□□□□ -1.01
DDX39A-201ENST00000242776 PLNP26678 52 aa8.72□□□□□ -1.01
DDX39A-201ENST00000242776 AKR1D1P51857 326 aa8.72□□□□□ -1.01
DDX39A-201ENST00000242776 FOXI1Q12951 378 aa8.72□□□□□ -1.01
DDX39A-201ENST00000242776 LINC00469Q8N7U9 141 aa8.72□□□□□ -1.01
DDX39A-201ENST00000242776 IGHV3OR16-9A0A0B4J2B5 98 aa8.71□□□□□ -1.01
DDX39A-201ENST00000242776 H3BRM9 83 aa8.71□□□□□ -1.01
DDX39A-201ENST00000242776 DPM2O94777 84 aa8.71□□□□□ -1.01
DDX39A-201ENST00000242776 KRTAP26-1Q6PEX3 210 aa8.71□□□□□ -1.01
DDX39A-201ENST00000242776 IGHV3-64A0A075B6Q5 118 aa8.7□□□□□ -1.02
DDX39A-201ENST00000242776 IGLV5-45A0A087WSX0 123 aa8.7□□□□□ -1.02
DDX39A-201ENST00000242776 APOMO95445 188 aa8.7□□□□□ -1.02
DDX39A-201ENST00000242776 COX6A2Q02221 97 aa8.7□□□□□ -1.02
DDX39A-201ENST00000242776 LINC01545Q5VT33 79 aa8.7□□□□□ -1.02
DDX39A-201ENST00000242776 CFAP161Q6P656 301 aa8.7□□□□□ -1.02
DDX39A-201ENST00000242776 LINC01561Q8N1V8 128 aa8.7□□□□□ -1.02
DDX39A-201ENST00000242776 OR10D4PQ8NGN7 298 aa8.7□□□□□ -1.02
DDX39A-201ENST00000242776 A0A087WZ39 114 aa8.7□□□□□ -1.02
DDX39A-201ENST00000242776 C11orf86A6NJI1 115 aa8.7□□□□□ -1.02
DDX39A-201ENST00000242776 IGKCP01834 107 aa8.7□□□□□ -1.02
DDX39A-201ENST00000242776 CIRBPQ14011 172 aaKnown RBP8.7□□□□□ -1.02
DDX39A-201ENST00000242776 TMEM170BQ5T4T1 132 aa8.7□□□□□ -1.02
DDX39A-201ENST00000242776 C5orf38Q86SI9 138 aa8.7□□□□□ -1.02
DDX39A-201ENST00000242776 LINC01600Q96MT4 127 aa8.7□□□□□ -1.02
DDX39A-201ENST00000242776 IGHV1-58A0A0C4DH39 117 aa8.69□□□□□ -1.02
DDX39A-201ENST00000242776 SLPIP03973 132 aa8.69□□□□□ -1.02
DDX39A-201ENST00000242776 ZNF22P17026 224 aaPredicted RBP8.69□□□□□ -1.02
DDX39A-201ENST00000242776 SPACA4Q8TDM5 124 aa8.69□□□□□ -1.02
DDX39A-201ENST00000242776 C7orf33Q8WU49 177 aa8.69□□□□□ -1.02
DDX39A-201ENST00000242776 PMCHL2Q9BQD1 86 aa8.69□□□□□ -1.02
DDX39A-201ENST00000242776 CDKN2A-AS1Q9UH64 79 aa8.69□□□□□ -1.02
DDX39A-201ENST00000242776 CNBPP62633 177 aaKnown RBP8.67□□□□□ -1.02
DDX39A-201ENST00000242776 IGKV2-24A0A0C4DH68 120 aa8.66□□□□□ -1.02
DDX39A-201ENST00000242776 HERVK_113P61574 105 aa8.66□□□□□ -1.02
DDX39A-201ENST00000242776 MAJINQ3KP22 176 aa8.66□□□□□ -1.02
DDX39A-201ENST00000242776 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.65□□□□□ -1.02
DDX39A-201ENST00000242776 SCGB1D1O95968 90 aa8.65□□□□□ -1.02
DDX39A-201ENST00000242776 SPINK8P0C7L1 97 aa8.65□□□□□ -1.02
DDX39A-201ENST00000242776 ORAOV1Q8WV07 137 aa8.65□□□□□ -1.02
DDX39A-201ENST00000242776 PLAC8Q9NZF1 115 aa8.65□□□□□ -1.02
DDX39A-201ENST00000242776 SMIM1B2RUZ4 78 aa8.64□□□□□ -1.03
DDX39A-201ENST00000242776 ZNF561-AS1K7EIQ3 104 aa8.64□□□□□ -1.03
DDX39A-201ENST00000242776 PRR3P79522 188 aaKnown RBP8.64□□□□□ -1.03
DDX39A-201ENST00000242776 C15orf56Q8N910 161 aa8.64□□□□□ -1.03
DDX39A-201ENST00000242776 LPAP08519 4548 aa8.64□□□□□ -1.03
DDX39A-201ENST00000242776 GVQW2A0A096LPI5 108 aaPredicted RBP8.64□□□□□ -1.03
DDX39A-201ENST00000242776 TMEM223A0PJW6 202 aa8.64□□□□□ -1.03
DDX39A-201ENST00000242776 PRSS2P07478 247 aa8.64□□□□□ -1.03
DDX39A-201ENST00000242776 SPAG11BQ08648 103 aa8.64□□□□□ -1.03
DDX39A-201ENST00000242776 HIGD2BQ4VC39 106 aa8.63□□□□□ -1.03
DDX39A-201ENST00000242776 TOMM7Q9P0U1 55 aa8.63□□□□□ -1.03
DDX39A-201ENST00000242776 Q8IZM0 81 aa8.62□□□□□ -1.03
DDX39A-201ENST00000242776 STPG4Q8N801 248 aa8.62□□□□□ -1.03
DDX39A-201ENST00000242776 HSBP1L1C9JCN9 74 aa8.61□□□□□ -1.03
DDX39A-201ENST00000242776 F8WDY8 70 aa8.61□□□□□ -1.03
DDX39A-201ENST00000242776 KRTAP10-8P60410 259 aa8.61□□□□□ -1.03
DDX39A-201ENST00000242776 JOSD1Q15040 202 aaPredicted RBP8.61□□□□□ -1.03
DDX39A-201ENST00000242776 ATOH7Q8N100 152 aa8.61□□□□□ -1.03
DDX39A-201ENST00000242776 COX7B2Q8TF08 81 aa8.61□□□□□ -1.03
DDX39A-201ENST00000242776 IGLV5-39A0A0G2JS06 123 aa8.6□□□□□ -1.03
DDX39A-201ENST00000242776 CXCL5P42830 114 aa8.6□□□□□ -1.03
DDX39A-201ENST00000242776 C2orf48Q96LS8 159 aa8.6□□□□□ -1.03
DDX39A-201ENST00000242776 LEPROTO15243 131 aa8.59□□□□□ -1.03
DDX39A-201ENST00000242776 C6orf226Q5I0X4 101 aa8.59□□□□□ -1.03
DDX39A-201ENST00000242776 REG3GQ6UW15 175 aa8.59□□□□□ -1.03
DDX39A-201ENST00000242776 PLEKHB2Q96CS7 222 aa8.59□□□□□ -1.03
DDX39A-201ENST00000242776 E9PLD3 99 aa8.58□□□□□ -1.04
DDX39A-201ENST00000242776 NDUFA1O15239 70 aa8.58□□□□□ -1.04
DDX39A-201ENST00000242776 CKS1BP61024 79 aa8.58□□□□□ -1.04
DDX39A-201ENST00000242776 SFTA2Q6UW10 78 aa8.58□□□□□ -1.04
DDX39A-201ENST00000242776 CAMK2N2Q96S95 79 aa8.58□□□□□ -1.04
DDX39A-201ENST00000242776 KIAA0087Q14695 138 aa8.57□□□□□ -1.04
DDX39A-201ENST00000242776 SPINK6Q6UWN8 80 aa8.57□□□□□ -1.04
DDX39A-201ENST00000242776 A0A096LNI7 61 aa8.57□□□□□ -1.04
DDX39A-201ENST00000242776 LGALS3P17931 250 aaKnown RBP8.57□□□□□ -1.04
DDX39A-201ENST00000242776 LINC00526Q96FQ7 95 aa8.57□□□□□ -1.04
DDX39A-201ENST00000242776 J3QQQ9 107 aa8.56□□□□□ -1.04
DDX39A-201ENST00000242776 SYCNQ0VAF6 134 aa8.56□□□□□ -1.04
DDX39A-201ENST00000242776 PYY3Q5JQD4 70 aa8.56□□□□□ -1.04
DDX39A-201ENST00000242776 CARD19Q96LW7 228 aa8.56□□□□□ -1.04
DDX39A-201ENST00000242776 NMUP48645 174 aa8.55□□□□□ -1.04
DDX39A-201ENST00000242776 TRBV30A0A0K0K1B3 111 aa8.54□□□□□ -1.04
DDX39A-201ENST00000242776 LOC105371267A0A1B0GV96 52 aa8.54□□□□□ -1.04
DDX39A-201ENST00000242776 VAMP8Q9BV40 100 aa8.54□□□□□ -1.04
DDX39A-201ENST00000242776 PKIGQ9Y2B9 76 aa8.54□□□□□ -1.04
DDX39A-201ENST00000242776 MYMXA0A1B0GTQ4 84 aa8.53□□□□□ -1.04
DDX39A-201ENST00000242776 ANKRD39Q53RE8 183 aa8.53□□□□□ -1.04
DDX39A-201ENST00000242776 C2orf82Q6UX34 121 aa8.53□□□□□ -1.04
DDX39A-201ENST00000242776 NDUFA12Q9UI09 145 aa8.53□□□□□ -1.04
DDX39A-201ENST00000242776 TSPEAR-AS2P59090 65 aa8.52□□□□□ -1.05
DDX39A-201ENST00000242776 HERV-K104P63124 156 aa8.52□□□□□ -1.05
DDX39A-201ENST00000242776 RNF151Q2KHN1 245 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms