RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 CSNK1G2-AS1Q8NCQ2 148 aa10.79□□□□□ -0.68
DDX55-201ENST00000238146 NF1P21359 2839 aa10.79□□□□□ -0.68
DDX55-201ENST00000238146 SONP18583 2426 aaKnown RBP10.78□□□□□ -0.68
DDX55-201ENST00000238146 PIEZO1Q92508 2521 aa10.78□□□□□ -0.68
DDX55-201ENST00000238146 SERP2Q8N6R1 65 aa10.77□□□□□ -0.69
DDX55-201ENST00000238146 J3KT08 172 aa10.76□□□□□ -0.69
DDX55-201ENST00000238146 CCKP06307 115 aa10.76□□□□□ -0.69
DDX55-201ENST00000238146 C19orf73Q9NVV2 129 aa10.76□□□□□ -0.69
DDX55-201ENST00000238146 SETD2Q9BYW2 2564 aaPredicted RBP10.76□□□□□ -0.69
DDX55-201ENST00000238146 XCL1P47992 114 aa10.76□□□□□ -0.69
DDX55-201ENST00000238146 USP17L23D6RBM5 183 aa10.75□□□□□ -0.69
DDX55-201ENST00000238146 CMC4P56277 68 aaPredicted RBP10.75□□□□□ -0.69
DDX55-201ENST00000238146 NANOS2P60321 138 aaKnown RBP10.75□□□□□ -0.69
DDX55-201ENST00000238146 TMEM86BQ8N661 226 aa10.75□□□□□ -0.69
DDX55-201ENST00000238146 LINC00167Q96N53 147 aa10.75□□□□□ -0.69
DDX55-201ENST00000238146 ZNF469Q96JG9 3925 aaPredicted RBP10.75□□□□□ -0.69
DDX55-201ENST00000238146 PRR3P79522 188 aaKnown RBP10.74□□□□□ -0.69
DDX55-201ENST00000238146 UPK3BQ9BT76 320 aa10.74□□□□□ -0.69
DDX55-201ENST00000238146 DNAJC9-AS1A6NH13 148 aa10.74□□□□□ -0.69
DDX55-201ENST00000238146 DEFB113Q30KQ7 82 aa10.73□□□□□ -0.69
DDX55-201ENST00000238146 Q8IZM0 81 aa10.73□□□□□ -0.69
DDX55-201ENST00000238146 Q8N814 137 aa10.72□□□□□ -0.69
DDX55-201ENST00000238146 RPS28P62857 69 aaKnown RBP10.71□□□□□ -0.69
DDX55-201ENST00000238146 JMJD7-PLA2G4BH0Y9G9 81 aa10.71□□□□□ -0.69
DDX55-201ENST00000238146 DEFB130BP0DP73 79 aa10.71□□□□□ -0.69
DDX55-201ENST00000238146 DEFB130AP0DP74 79 aa10.71□□□□□ -0.69
DDX55-201ENST00000238146 CLPSL2Q6UWE3 100 aa10.71□□□□□ -0.69
DDX55-201ENST00000238146 FAM19A5Q7Z5A7 132 aaPredicted RBP10.71□□□□□ -0.69
DDX55-201ENST00000238146 IGLV1-51P01701 117 aa10.71□□□□□ -0.7
DDX55-201ENST00000238146 ESM1Q9NQ30 184 aa10.71□□□□□ -0.7
DDX55-201ENST00000238146 A0A1B0GUV1 79 aa10.7□□□□□ -0.7
DDX55-201ENST00000238146 TMEM256-PLSCR3K7ERE1 68 aa10.69□□□□□ -0.7
DDX55-201ENST00000238146 GYPEP15421 78 aa10.69□□□□□ -0.7
DDX55-201ENST00000238146 HILS1P60008 231 aa10.69□□□□□ -0.7
DDX55-201ENST00000238146 TMEM258P61165 79 aa10.69□□□□□ -0.7
DDX55-201ENST00000238146 ZNF462Q96JM2 2506 aa10.68□□□□□ -0.7
DDX55-201ENST00000238146 S100A7L2Q5SY68 101 aa10.68□□□□□ -0.7
DDX55-201ENST00000238146 KIR2DL5BQ8NHK3 375 aa10.68□□□□□ -0.7
DDX55-201ENST00000238146 WFDC9Q8NEX5 89 aa10.68□□□□□ -0.7
DDX55-201ENST00000238146 FN1P02751 2386 aaKnown RBP10.68□□□□□ -0.7
DDX55-201ENST00000238146 NDUFC2O95298 119 aa10.67□□□□□ -0.7
DDX55-201ENST00000238146 KIAA0087Q14695 138 aa10.67□□□□□ -0.7
DDX55-201ENST00000238146 KRTAP1-3Q8IUG1 177 aa10.67□□□□□ -0.7
DDX55-201ENST00000238146 DPH3Q96FX2 82 aa10.67□□□□□ -0.7
DDX55-201ENST00000238146 ZFYVE26Q68DK2 2539 aa10.67□□□□□ -0.7
DDX55-201ENST00000238146 LYPD5Q6UWN5 251 aa10.66□□□□□ -0.7
DDX55-201ENST00000238146 ATP5EP2Q5VTU8 51 aa10.65□□□□□ -0.7
DDX55-201ENST00000238146 A0A096LPF7 62 aa10.65□□□□□ -0.7
DDX55-201ENST00000238146 PRB1P04280 392 aa10.65□□□□□ -0.7
DDX55-201ENST00000238146 FAM19A1Q7Z5A9 133 aa10.65□□□□□ -0.7
DDX55-201ENST00000238146 LINC00612Q8N6U2 182 aa10.65□□□□□ -0.7
DDX55-201ENST00000238146 LINC01006Q8NI28 216 aa10.65□□□□□ -0.7
DDX55-201ENST00000238146 ITPR3Q14573 2671 aa10.65□□□□□ -0.71
DDX55-201ENST00000238146 CCDC168Q8NDH2 2452 aa10.64□□□□□ -0.71
DDX55-201ENST00000238146 COX17Q14061 63 aa10.64□□□□□ -0.71
DDX55-201ENST00000238146 C6orf99Q4VX62 202 aa10.64□□□□□ -0.71
DDX55-201ENST00000238146 C9orf116Q5BN46 136 aaPredicted RBP10.64□□□□□ -0.71
DDX55-201ENST00000238146 Q8NDZ9 215 aa10.64□□□□□ -0.71
DDX55-201ENST00000238146 ENHOQ6UWT2 76 aa10.63□□□□□ -0.71
DDX55-201ENST00000238146 TRAV23DV6A0A075B6W5 121 aa10.63□□□□□ -0.71
DDX55-201ENST00000238146 GHRHP01286 108 aa10.63□□□□□ -0.71
DDX55-201ENST00000238146 SMIM9A6NGZ8 99 aa10.62□□□□□ -0.71
DDX55-201ENST00000238146 RNASE1P07998 156 aaKnown RBP10.62□□□□□ -0.71
DDX55-201ENST00000238146 CD164L2Q6UWJ8 174 aa10.62□□□□□ -0.71
DDX55-201ENST00000238146 LINC00269Q8N2A0 174 aa10.62□□□□□ -0.71
DDX55-201ENST00000238146 DSCR8Q96T75 97 aa10.62□□□□□ -0.71
DDX55-201ENST00000238146 BBC3Q96PG8 261 aaPredicted RBP10.62□□□□□ -0.71
DDX55-201ENST00000238146 IGHV4-28A0A0C4DH34 117 aa10.61□□□□□ -0.71
DDX55-201ENST00000238146 UBL5Q9BZL1 73 aa10.61□□□□□ -0.71
DDX55-201ENST00000238146 PRO0255Q9UI72 69 aa10.61□□□□□ -0.71
DDX55-201ENST00000238146 IGLV10-54A0A075B6I4 117 aa10.61□□□□□ -0.71
DDX55-201ENST00000238146 OXTP01178 125 aa10.61□□□□□ -0.71
DDX55-201ENST00000238146 CHCHD10Q8WYQ3 142 aaPredicted RBP10.61□□□□□ -0.71
DDX55-201ENST00000238146 APCP25054 2843 aa10.6□□□□□ -0.71
DDX55-201ENST00000238146 LINC00575Q6W349 94 aa10.6□□□□□ -0.71
DDX55-201ENST00000238146 TRBV10-3A0A0K0K1G6 114 aa10.6□□□□□ -0.71
DDX55-201ENST00000238146 Q8N3U1 123 aa10.6□□□□□ -0.71
DDX55-201ENST00000238146 UBR5O95071 2799 aaPredicted RBP10.59□□□□□ -0.71
DDX55-201ENST00000238146 WFDC11Q8NEX6 87 aa10.59□□□□□ -0.71
DDX55-201ENST00000238146 C5orf47Q569G3 176 aa10.58□□□□□ -0.72
DDX55-201ENST00000238146 Q6ZQT0 140 aa10.58□□□□□ -0.72
DDX55-201ENST00000238146 NBEAL2Q6ZNJ1 2754 aa10.57□□□□□ -0.72
DDX55-201ENST00000238146 FLNAP21333 2647 aaKnown RBP10.57□□□□□ -0.72
DDX55-201ENST00000238146 C16orf95Q9H693 158 aa10.57□□□□□ -0.72
DDX55-201ENST00000238146 X6R8D5 127 aa10.57□□□□□ -0.72
DDX55-201ENST00000238146 GCN1Q92616 2671 aaKnown RBP10.57□□□□□ -0.72
DDX55-201ENST00000238146 RBM3P98179 157 aaKnown RBP10.57□□□□□ -0.72
DDX55-201ENST00000238146 ANGP03950 147 aaKnown RBP10.56□□□□□ -0.72
DDX55-201ENST00000238146 REG3AQ06141 175 aa10.56□□□□□ -0.72
DDX55-201ENST00000238146 M0R2N4 97 aa10.55□□□□□ -0.72
DDX55-201ENST00000238146 C10orf25Q5T742 122 aa10.55□□□□□ -0.72
DDX55-201ENST00000238146 ZNF561-AS1K7EIQ3 104 aa10.54□□□□□ -0.72
DDX55-201ENST00000238146 MTORP42345 2549 aa10.54□□□□□ -0.72
DDX55-201ENST00000238146 LOC110117498A0A087WWA1 95 aa10.54□□□□□ -0.72
DDX55-201ENST00000238146 UNQ6190/PRO20217Q6UXQ8 127 aa10.53□□□□□ -0.72
DDX55-201ENST00000238146 C20orf197Q8N268 126 aa10.53□□□□□ -0.72
DDX55-201ENST00000238146 C6orf223Q8N319 242 aa10.53□□□□□ -0.72
DDX55-201ENST00000238146 LAMTOR3Q9UHA4 124 aa10.53□□□□□ -0.72
DDX55-201ENST00000238146 NDUFC2-KCTD14E9PQ53 114 aa10.52□□□□□ -0.73
DDX55-201ENST00000238146 LINC01547P58512 204 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms