RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 CYSRT1A8MQ03 144 aa8.99□□□□□ -0.97
VAMP4-201ENST00000236192 C8orf87E5RJ46 101 aa8.99□□□□□ -0.97
VAMP4-201ENST00000236192 H3BPC8 53 aa8.99□□□□□ -0.97
VAMP4-201ENST00000236192 UNQ6190/PRO20217Q6UXQ8 127 aa8.99□□□□□ -0.97
VAMP4-201ENST00000236192 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.98□□□□□ -0.97
VAMP4-201ENST00000236192 MDFIQ99750 246 aa8.98□□□□□ -0.97
VAMP4-201ENST00000236192 KPRPQ5T749 579 aaPredicted RBP8.98□□□□□ -0.97
VAMP4-201ENST00000236192 CREBBPQ92793 2442 aa8.98□□□□□ -0.97
VAMP4-201ENST00000236192 ZNF575Q86XF7 245 aa8.98□□□□□ -0.97
VAMP4-201ENST00000236192 DEFB114Q30KQ6 69 aa8.98□□□□□ -0.97
VAMP4-201ENST00000236192 NCOR1O75376 2440 aa8.97□□□□□ -0.97
VAMP4-201ENST00000236192 SYCNQ0VAF6 134 aa8.97□□□□□ -0.97
VAMP4-201ENST00000236192 FAM229BQ4G0N7 80 aa8.97□□□□□ -0.97
VAMP4-201ENST00000236192 LINC00167Q96N53 147 aa8.97□□□□□ -0.97
VAMP4-201ENST00000236192 IGHV4-61A0A0C4DH41 118 aa8.97□□□□□ -0.97
VAMP4-201ENST00000236192 ELOF1P60002 83 aaKnown RBP8.97□□□□□ -0.97
VAMP4-201ENST00000236192 CACNA1BQ00975 2339 aa8.96□□□□□ -0.97
VAMP4-201ENST00000236192 C19orf84I3L1E1 186 aa8.96□□□□□ -0.97
VAMP4-201ENST00000236192 COL6A6A6NMZ7 2263 aa8.96□□□□□ -0.97
VAMP4-201ENST00000236192 H3BS24 57 aa8.96□□□□□ -0.97
VAMP4-201ENST00000236192 LMO4P61968 165 aa8.96□□□□□ -0.97
VAMP4-201ENST00000236192 C9orf66Q5T8R8 295 aa8.96□□□□□ -0.97
VAMP4-201ENST00000236192 PSCAO43653 123 aa8.96□□□□□ -0.98
VAMP4-201ENST00000236192 SORL1Q92673 2214 aa8.96□□□□□ -0.98
VAMP4-201ENST00000236192 SPAG11AQ6PDA7 123 aa8.95□□□□□ -0.98
VAMP4-201ENST00000236192 LOC101927531A0A1B0GV80 90 aa8.94□□□□□ -0.98
VAMP4-201ENST00000236192 PCOTHQ58A44 107 aa8.94□□□□□ -0.98
VAMP4-201ENST00000236192 SPTBN2O15020 2390 aa8.94□□□□□ -0.98
VAMP4-201ENST00000236192 A0A1B0GUV1 79 aa8.92□□□□□ -0.98
VAMP4-201ENST00000236192 DEFB116Q30KQ4 102 aa8.91□□□□□ -0.98
VAMP4-201ENST00000236192 C16orf95Q9H693 158 aa8.91□□□□□ -0.98
VAMP4-201ENST00000236192 FBXL19-AS1Q494R0 122 aa8.91□□□□□ -0.98
VAMP4-201ENST00000236192 PLA2G2CQ5R387 149 aa8.91□□□□□ -0.98
VAMP4-201ENST00000236192 SPART-AS1P0CW21 52 aa8.9□□□□□ -0.98
VAMP4-201ENST00000236192 CDC42SE1Q9NRR8 79 aa8.9□□□□□ -0.98
VAMP4-201ENST00000236192 SPTAN1Q13813 2472 aaKnown RBP8.9□□□□□ -0.98
VAMP4-201ENST00000236192 C10orf99Q6UWK7 81 aa8.89□□□□□ -0.99
VAMP4-201ENST00000236192 UBE2DNLQ8IWF7 75 aa8.89□□□□□ -0.99
VAMP4-201ENST00000236192 NOTCH3Q9UM47 2321 aa8.88□□□□□ -0.99
VAMP4-201ENST00000236192 K7ERS5 55 aa8.88□□□□□ -0.99
VAMP4-201ENST00000236192 EGFEM1PQ0D2K5 195 aa8.88□□□□□ -0.99
VAMP4-201ENST00000236192 SPTA1P02549 2419 aa8.88□□□□□ -0.99
VAMP4-201ENST00000236192 KLK9Q2XQG4 91 aa8.88□□□□□ -0.99
VAMP4-201ENST00000236192 FSHBP01225 129 aa8.87□□□□□ -0.99
VAMP4-201ENST00000236192 COA5Q86WW8 74 aa8.87□□□□□ -0.99
VAMP4-201ENST00000236192 C11orf71Q6IPW1 123 aa8.87□□□□□ -0.99
VAMP4-201ENST00000236192 CACNA1GO43497 2377 aa8.87□□□□□ -0.99
VAMP4-201ENST00000236192 CNOT1A5YKK6 2376 aaKnown RBP8.86□□□□□ -0.99
VAMP4-201ENST00000236192 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.86□□□□□ -0.99
VAMP4-201ENST00000236192 Q6ZRP5 223 aa8.86□□□□□ -0.99
VAMP4-201ENST00000236192 EPM2AB3EWF7 344 aa8.86□□□□□ -0.99
VAMP4-201ENST00000236192 KIAA0087Q14695 138 aa8.86□□□□□ -0.99
VAMP4-201ENST00000236192 RETNLBQ9BQ08 111 aa8.86□□□□□ -0.99
VAMP4-201ENST00000236192 OCR1Q9BZK8 76 aa8.86□□□□□ -0.99
VAMP4-201ENST00000236192 MED13LQ71F56 2210 aa8.85□□□□□ -0.99
VAMP4-201ENST00000236192 Q6ZTC4 211 aa8.85□□□□□ -0.99
VAMP4-201ENST00000236192 PCNX1Q96RV3 2341 aa8.84□□□□□ -0.99
VAMP4-201ENST00000236192 RPL37AP8A6NKH3 93 aa8.83□□□□□ -1
VAMP4-201ENST00000236192 MAPK1IP1LQ8NDC0 245 aa8.83□□□□□ -1
VAMP4-201ENST00000236192 ZDBF2Q9HCK1 2354 aa8.83□□□□□ -1
VAMP4-201ENST00000236192 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.82□□□□□ -1
VAMP4-201ENST00000236192 LELP1Q5T871 98 aa8.82□□□□□ -1
VAMP4-201ENST00000236192 A0A087WSZ3 146 aa8.82□□□□□ -1
VAMP4-201ENST00000236192 LINC00588Q9Y4M8 146 aa8.82□□□□□ -1
VAMP4-201ENST00000236192 IGLV6-57P01721 117 aa8.82□□□□□ -1
VAMP4-201ENST00000236192 DEFB4AO15263 64 aa8.81□□□□□ -1
VAMP4-201ENST00000236192 Q8NBF4 154 aa8.81□□□□□ -1
VAMP4-201ENST00000236192 C22orf24Q9Y442 160 aa8.81□□□□□ -1
VAMP4-201ENST00000236192 A0A1B0GU69 56 aa8.8□□□□□ -1
VAMP4-201ENST00000236192 M0R2N4 97 aa8.8□□□□□ -1
VAMP4-201ENST00000236192 ADORA2A-AS1P86434 159 aa8.8□□□□□ -1
VAMP4-201ENST00000236192 SPANXA2-OT1Q8N9U9 137 aa8.79□□□□□ -1
VAMP4-201ENST00000236192 ODF3L2Q3SX64 289 aa8.79□□□□□ -1
VAMP4-201ENST00000236192 AVPP01185 164 aa8.78□□□□□ -1
VAMP4-201ENST00000236192 IGHV4-30-4P0DP06 118 aa8.78□□□□□ -1
VAMP4-201ENST00000236192 IGHV4-31P0DP07 118 aa8.78□□□□□ -1
VAMP4-201ENST00000236192 A0A096LNI7 61 aa8.78□□□□□ -1
VAMP4-201ENST00000236192 PTPRQQ9UMZ3 2332 aa8.78□□□□□ -1
VAMP4-201ENST00000236192 K7EQZ3 153 aa8.78□□□□□ -1
VAMP4-201ENST00000236192 Q75L30 129 aa8.78□□□□□ -1
VAMP4-201ENST00000236192 DEFB135Q30KP9 77 aa8.77□□□□□ -1
VAMP4-201ENST00000236192 TP53AIP1Q9HCN2 124 aa8.77□□□□□ -1
VAMP4-201ENST00000236192 ZNF706Q9Y5V0 76 aaPredicted RBP8.77□□□□□ -1.01
VAMP4-201ENST00000236192 TECTAO75443 2155 aa8.76□□□□□ -1.01
VAMP4-201ENST00000236192 Q8NA96 180 aa8.75□□□□□ -1.01
VAMP4-201ENST00000236192 LINC01554Q52M75 96 aa8.75□□□□□ -1.01
VAMP4-201ENST00000236192 MUC4Q99102 2169 aa8.75□□□□□ -1.01
VAMP4-201ENST00000236192 C18orf65Q6ZTR6 163 aa8.74□□□□□ -1.01
VAMP4-201ENST00000236192 ZNF702PQ9H963 129 aa8.74□□□□□ -1.01
VAMP4-201ENST00000236192 Q5VV11 94 aa8.74□□□□□ -1.01
VAMP4-201ENST00000236192 Q6YL49 198 aa8.74□□□□□ -1.01
VAMP4-201ENST00000236192 OXLD1Q5BKU9 147 aa8.74□□□□□ -1.01
VAMP4-201ENST00000236192 C16orf90A8MZG2 172 aa8.74□□□□□ -1.01
VAMP4-201ENST00000236192 FAM104AQ969W3 186 aa8.74□□□□□ -1.01
VAMP4-201ENST00000236192 Q9BRP9 147 aa8.73□□□□□ -1.01
VAMP4-201ENST00000236192 ACYP2P14621 99 aa8.72□□□□□ -1.01
VAMP4-201ENST00000236192 C11orf45Q8TAV5 145 aa8.72□□□□□ -1.01
VAMP4-201ENST00000236192 GVINP1Q7Z2Y8 2422 aa8.72□□□□□ -1.01
VAMP4-201ENST00000236192 REG3GQ6UW15 175 aa8.71□□□□□ -1.01
VAMP4-201ENST00000236192 TRIOBPQ9H2D6 2365 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms