RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 IGLV4-69A0A075B6H9 119 aa8.09□□□□□ -1.11
MSH6-201ENST00000234420 COL27A1Q8IZC6 1860 aaPredicted RBP8.09□□□□□ -1.11
MSH6-201ENST00000234420 hDV103S1A0JD37 113 aa8.09□□□□□ -1.11
MSH6-201ENST00000234420 C9orf116Q5BN46 136 aaPredicted RBP8.09□□□□□ -1.11
MSH6-201ENST00000234420 C7orf65Q6ZTY9 151 aa8.08□□□□□ -1.12
MSH6-201ENST00000234420 IGLV8-61A0A075B6I0 122 aa8.08□□□□□ -1.12
MSH6-201ENST00000234420 REG3GQ6UW15 175 aa8.08□□□□□ -1.12
MSH6-201ENST00000234420 C1orf64Q8NEQ6 169 aa8.07□□□□□ -1.12
MSH6-201ENST00000234420 HCG22E2RYF7 251 aa8.07□□□□□ -1.12
MSH6-201ENST00000234420 CCDC140Q96MF4 163 aa8.07□□□□□ -1.12
MSH6-201ENST00000234420 CD164L2Q6UWJ8 174 aa8.06□□□□□ -1.12
MSH6-201ENST00000234420 SSBP3-AS1Q7Z2R9 100 aa8.06□□□□□ -1.12
MSH6-201ENST00000234420 BDP1A6H8Y1 2624 aa8.06□□□□□ -1.12
MSH6-201ENST00000234420 TRBV10-3A0A0K0K1G6 114 aa8.06□□□□□ -1.12
MSH6-201ENST00000234420 COX6A2Q02221 97 aa8.06□□□□□ -1.12
MSH6-201ENST00000234420 RPS28P62857 69 aaKnown RBP8.06□□□□□ -1.12
MSH6-201ENST00000234420 ZNF702PQ9H963 129 aa8.05□□□□□ -1.12
MSH6-201ENST00000234420 LMO4P61968 165 aa8.05□□□□□ -1.12
MSH6-201ENST00000234420 LINC00959A0A1B0GUT2 108 aa8.05□□□□□ -1.12
MSH6-201ENST00000234420 EDN2P20800 178 aa8.05□□□□□ -1.12
MSH6-201ENST00000234420 COX17Q14061 63 aa8.05□□□□□ -1.12
MSH6-201ENST00000234420 IGFL2Q6UWQ7 119 aa8.04□□□□□ -1.12
MSH6-201ENST00000234420 MSMPQ1L6U9 139 aa8.03□□□□□ -1.12
MSH6-201ENST00000234420 TRBV6-4A0A1B0GX49 114 aa8.03□□□□□ -1.12
MSH6-201ENST00000234420 MYO9AB2RTY4 2548 aa8.03□□□□□ -1.12
MSH6-201ENST00000234420 SMIM29Q86T20 159 aa8.03□□□□□ -1.12
MSH6-201ENST00000234420 ODF3Q96PU9 254 aa8.03□□□□□ -1.12
MSH6-201ENST00000234420 LELP1Q5T871 98 aa8.02□□□□□ -1.12
MSH6-201ENST00000234420 A0A087WSZ3 146 aa8.02□□□□□ -1.13
MSH6-201ENST00000234420 ZNF295-AS1Q8N0V1 137 aa8.02□□□□□ -1.13
MSH6-201ENST00000234420 IGLV1-47P01700 117 aa8.02□□□□□ -1.13
MSH6-201ENST00000234420 ADAMTSL4-AS1Q5T5F5 129 aa8.01□□□□□ -1.13
MSH6-201ENST00000234420 CYSRT1A8MQ03 144 aa8.01□□□□□ -1.13
MSH6-201ENST00000234420 TSPEAR-AS2P59090 65 aa8.01□□□□□ -1.13
MSH6-201ENST00000234420 LINC00310P59036 64 aa8.01□□□□□ -1.13
MSH6-201ENST00000234420 PCSK5Q92824 1860 aa8□□□□□ -1.13
MSH6-201ENST00000234420 WDR87Q6ZQQ6 2873 aa8□□□□□ -1.13
MSH6-201ENST00000234420 CDSNQ15517 529 aa8□□□□□ -1.13
MSH6-201ENST00000234420 Q9BRP9 147 aa7.99□□□□□ -1.13
MSH6-201ENST00000234420 K7EQG2 157 aa7.99□□□□□ -1.13
MSH6-201ENST00000234420 P0C879 139 aa7.99□□□□□ -1.13
MSH6-201ENST00000234420 ODF3BA8MYP8 253 aa7.99□□□□□ -1.13
MSH6-201ENST00000234420 UNQ6190/PRO20217Q6UXQ8 127 aa7.99□□□□□ -1.13
MSH6-201ENST00000234420 A8MTW9 85 aa7.99□□□□□ -1.13
MSH6-201ENST00000234420 KRTAP27-1Q3LI81 207 aa7.99□□□□□ -1.13
MSH6-201ENST00000234420 POLR2KP53803 58 aaKnown RBP7.99□□□□□ -1.13
MSH6-201ENST00000234420 Q8IZM0 81 aa7.99□□□□□ -1.13
MSH6-201ENST00000234420 FHL2Q14192 279 aa7.98□□□□□ -1.13
MSH6-201ENST00000234420 CD164Q04900 197 aa7.98□□□□□ -1.13
MSH6-201ENST00000234420 IGIPA6NJ69 53 aa7.98□□□□□ -1.13
MSH6-201ENST00000234420 ZNF580Q9UK33 172 aa7.98□□□□□ -1.13
MSH6-201ENST00000234420 BRWD1-AS2P59051 145 aa7.97□□□□□ -1.13
MSH6-201ENST00000234420 URB1-AS1Q96HZ7 61 aa7.97□□□□□ -1.13
MSH6-201ENST00000234420 CDC42SE2Q9NRR3 84 aa7.97□□□□□ -1.13
MSH6-201ENST00000234420 C11orf21Q9P2W6 132 aa7.97□□□□□ -1.13
MSH6-201ENST00000234420 LTBP2Q14767 1821 aa7.97□□□□□ -1.13
MSH6-201ENST00000234420 ACYP2P14621 99 aa7.97□□□□□ -1.13
MSH6-201ENST00000234420 PRR9Q5T870 116 aa7.96□□□□□ -1.13
MSH6-201ENST00000234420 TYMSOSQ8TAI1 123 aa7.96□□□□□ -1.13
MSH6-201ENST00000234420 PCNTO95613 3336 aa7.96□□□□□ -1.14
MSH6-201ENST00000234420 LINC00242Q5T6M2 205 aa7.95□□□□□ -1.14
MSH6-201ENST00000234420 MUC7Q8TAX7 377 aa7.95□□□□□ -1.14
MSH6-201ENST00000234420 LINC01561Q8N1V8 128 aa7.95□□□□□ -1.14
MSH6-201ENST00000234420 SMR3BP02814 79 aaPredicted RBP7.95□□□□□ -1.14
MSH6-201ENST00000234420 MOBPQ13875 183 aa7.95□□□□□ -1.14
MSH6-201ENST00000234420 SMIM1B2RUZ4 78 aa7.94□□□□□ -1.14
MSH6-201ENST00000234420 FAM19A4Q96LR4 140 aa7.94□□□□□ -1.14
MSH6-201ENST00000234420 CR1P17927 2039 aa7.93□□□□□ -1.14
MSH6-201ENST00000234420 C1orf229Q6ZS94 237 aaPredicted RBP7.93□□□□□ -1.14
MSH6-201ENST00000234420 FSTL3O95633 263 aa7.93□□□□□ -1.14
MSH6-201ENST00000234420 C6orf48Q9UBA6 75 aa7.93□□□□□ -1.14
MSH6-201ENST00000234420 ZFYVE26Q68DK2 2539 aa7.93□□□□□ -1.14
MSH6-201ENST00000234420 A8MUN3 132 aa7.93□□□□□ -1.14
MSH6-201ENST00000234420 PSMG3-AS1Q96PY0 264 aa7.93□□□□□ -1.14
MSH6-201ENST00000234420 ZNF462Q96JM2 2506 aa7.92□□□□□ -1.14
MSH6-201ENST00000234420 CENPFP49454 3210 aa7.92□□□□□ -1.14
MSH6-201ENST00000234420 TTC28Q96AY4 2481 aa7.92□□□□□ -1.14
MSH6-201ENST00000234420 NHLRC4P0CG21 123 aaPredicted RBP7.92□□□□□ -1.14
MSH6-201ENST00000234420 Q6ZPA2 131 aa7.92□□□□□ -1.14
MSH6-201ENST00000234420 C9orf92A6NGG3 77 aa7.91□□□□□ -1.14
MSH6-201ENST00000234420 MRGPRG-AS1Q2M3A8 158 aa7.91□□□□□ -1.14
MSH6-201ENST00000234420 EIF4EBP1Q13541 118 aaPredicted RBP7.91□□□□□ -1.14
MSH6-201ENST00000234420 NOTCH2Q04721 2471 aa7.9□□□□□ -1.14
MSH6-201ENST00000234420 F8WDY8 70 aa7.89□□□□□ -1.15
MSH6-201ENST00000234420 AVPP01185 164 aa7.89□□□□□ -1.15
MSH6-201ENST00000234420 PIEZO2Q9H5I5 2752 aa7.89□□□□□ -1.15
MSH6-201ENST00000234420 RPL37AP61513 92 aaKnown RBP7.89□□□□□ -1.15
MSH6-201ENST00000234420 FHL3Q13643 280 aa7.89□□□□□ -1.15
MSH6-201ENST00000234420 LINC00336Q6ZUF6 198 aa7.89□□□□□ -1.15
MSH6-201ENST00000234420 Q96NJ1 140 aa7.89□□□□□ -1.15
MSH6-201ENST00000234420 TM2D3Q9BRN9 247 aa7.89□□□□□ -1.15
MSH6-201ENST00000234420 M0R2T5 61 aa7.88□□□□□ -1.15
MSH6-201ENST00000234420 LINC01554Q52M75 96 aa7.88□□□□□ -1.15
MSH6-201ENST00000234420 SMCPP49901 116 aaPredicted RBP7.87□□□□□ -1.15
MSH6-201ENST00000234420 EP400Q96L91 3159 aa7.87□□□□□ -1.15
MSH6-201ENST00000234420 FBXL19-AS1Q494R0 122 aa7.87□□□□□ -1.15
MSH6-201ENST00000234420 SPATA3Q8NHX4 192 aa7.86□□□□□ -1.15
MSH6-201ENST00000234420 C11orf71Q6IPW1 123 aa7.86□□□□□ -1.15
MSH6-201ENST00000234420 IGLV4-60A0A075B6I1 120 aa7.86□□□□□ -1.15
MSH6-201ENST00000234420 EGFEM1PQ0D2K5 195 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms