RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 DPM2O94777 84 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 FCER1GP30273 86 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 NMUP48645 174 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 GNG4P50150 75 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 CLPSL2Q6UWE3 100 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 SDHAF1A6NFY7 115 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 BCL2L11O43521 198 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 FABP4P15090 132 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 CRIP1P50238 77 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 SUMO2P61956 95 aaKnown RBP1.39□□□□□ -2.19
PRKD3-201ENST00000234179 ZNF345Q14585 488 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 CDIP1Q9H305 208 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 ZNF706Q9Y5V0 76 aaPredicted RBP1.39□□□□□ -2.19
PRKD3-201ENST00000234179 IGLV4-60A0A075B6I1 120 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 MRPS36P82909 103 aaKnown RBP1.39□□□□□ -2.19
PRKD3-201ENST00000234179 GEMIN7Q9H840 131 aaKnown RBP1.39□□□□□ -2.19
PRKD3-201ENST00000234179 LINC00862A6NCI5 91 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 SLPIP03973 132 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 XCL1P47992 114 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 FAM231DQ6ZW35 169 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 FA2HQ7L5A8 372 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 GFRA4Q9GZZ7 299 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 WFDC1Q9HC57 220 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 CDC42SE2Q9NRR3 84 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 TRBV27A0A0K0K1C4 114 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 PAGE4O60829 102 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 H2BFSP57053 126 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 HBBP68871 147 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 RIGQ13278 110 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 VAMP3Q15836 100 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 LINC00337Q8N6G1 96 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 PRR26Q8N8Z3 221 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 C20orf78Q9BR46 151 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 RPP21Q9H633 154 aaKnown RBP1.38□□□□□ -2.19
PRKD3-201ENST00000234179 SNRPEP62304 92 aaKnown RBP1.38□□□□□ -2.19
PRKD3-201ENST00000234179 SFTA2Q6UW10 78 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 UQCC3Q6UW78 93 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 TMUB2Q71RG4 321 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 UQCR10Q9UDW1 63 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 FAT4Q6V0I7 4981 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.38□□□□□ -2.19
PRKD3-201ENST00000234179 CHKB-CPT1BH3BT56 60 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 PPBPP02775 128 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 MEF2BQ02080 365 aaPredicted RBP1.38□□□□□ -2.19
PRKD3-201ENST00000234179 ERASQ7Z444 233 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 TYMSOSQ8TAI1 123 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 TMEM191AQ9H0A3 160 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 IGKV2D-26A0A0A0MRZ7 120 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 NDUFC2-KCTD14E9PQ53 114 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 K7EMI3 77 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 M0QXV9 152 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 BAGE3Q86Y29 109 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 LINC00304Q8N9R0 145 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 SCGB3A1Q96QR1 104 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 IGKV3OR2-268A0A0C4DH90 116 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 HMSDA8MTL9 139 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 TMEM250H0YL14 139 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 BCE1O60756 84 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 RPL35P42766 123 aaKnown RBP1.38□□□□□ -2.19
PRKD3-201ENST00000234179 FOXA3P55318 350 aaPredicted RBP1.38□□□□□ -2.19
PRKD3-201ENST00000234179 RPS29P62273 56 aaKnown RBP1.38□□□□□ -2.19
PRKD3-201ENST00000234179 ADIRFQ15847 76 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 S100A7L2Q5SY68 101 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 LYZL1Q6UWQ5 148 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 LINC01551Q86U37 167 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 LAMTOR3Q9UHA4 124 aa1.38□□□□□ -2.19
PRKD3-201ENST00000234179 IGLV7-46A0A075B6I9 117 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 BCL2P10415 239 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 CENPWQ5EE01 88 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 ORAOV1Q8WV07 137 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 C2orf88Q9BSF0 95 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 FXYD6-FXYD2A0A087WZ82 144 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 A0A1B0GUT8 65 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 GAGE10A6NGK3 116 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 SYS1-DBNDD2H3BUS1 97 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 M0R143 59 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 SLC25A20O43772 301 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 ATP5LO75964 103 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 POLR2KP53803 58 aaKnown RBP1.37□□□□□ -2.19
PRKD3-201ENST00000234179 C12orf57Q99622 126 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 MIEN1Q9BRT3 115 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 Q9UF83 564 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 LAMTOR2Q9Y2Q5 125 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 PYGO1Q9Y3Y4 419 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 GATD1Q8NB37 220 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 PRR15LQ9BU68 103 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 MED9Q9NWA0 146 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 TRIAP1O43715 76 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 MT-ND4LP03901 98 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 KRTAP1-4P0C5Y4 121 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 ZNF726P1Q15940 193 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 ASB16-AS1Q495Z4 193 aa1.37□□□□□ -2.19
PRKD3-201ENST00000234179 IGLV5-37A0A075B6J1 123 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 IFITM10A6NMD0 228 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 TSHBP01222 138 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 IFI27P40305 119 aaPredicted RBP1.36□□□□□ -2.19
PRKD3-201ENST00000234179 TMEM242Q9NWH2 141 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.36□□□□□ -2.19
PRKD3-201ENST00000234179 A0A1W2PNN7 141 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 IGKV2-29A2NJV5 120 aaPredicted RBP1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms