RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 SCO1O75880 301 aa7.26□□□□□ -1.25
SF3B6-201ENST00000233468 PMCHL1Q16048 86 aa7.26□□□□□ -1.25
SF3B6-201ENST00000233468 RNF151Q2KHN1 245 aa7.26□□□□□ -1.25
SF3B6-201ENST00000233468 LINC00469Q8N7U9 141 aa7.26□□□□□ -1.25
SF3B6-201ENST00000233468 FAM30AQ9NZY2 134 aa7.26□□□□□ -1.25
SF3B6-201ENST00000233468 VPS13BQ7Z7G8 4022 aa7.26□□□□□ -1.25
SF3B6-201ENST00000233468 A0A096LNJ9 63 aa7.25□□□□□ -1.25
SF3B6-201ENST00000233468 A0A0J9YXV3 536 aa7.25□□□□□ -1.25
SF3B6-201ENST00000233468 LINC00526Q96FQ7 95 aa7.25□□□□□ -1.25
SF3B6-201ENST00000233468 LOC107984640A0A0U1RRK4 108 aa7.24□□□□□ -1.25
SF3B6-201ENST00000233468 CKS1BP61024 79 aa7.24□□□□□ -1.25
SF3B6-201ENST00000233468 C6orf226Q5I0X4 101 aa7.24□□□□□ -1.25
SF3B6-201ENST00000233468 IFI27L1Q96BM0 104 aa7.24□□□□□ -1.25
SF3B6-201ENST00000233468 MRPL35Q9NZE8 188 aaKnown RBP7.24□□□□□ -1.25
SF3B6-201ENST00000233468 CDKN2A-AS1Q9UH64 79 aa7.24□□□□□ -1.25
SF3B6-201ENST00000233468 HSPB8Q9UJY1 196 aa7.24□□□□□ -1.25
SF3B6-201ENST00000233468 IGLV5-45A0A087WSX0 123 aa7.23□□□□□ -1.25
SF3B6-201ENST00000233468 SERF1AO75920 110 aa7.23□□□□□ -1.25
SF3B6-201ENST00000233468 LEPROTL1O95214 131 aa7.23□□□□□ -1.25
SF3B6-201ENST00000233468 IGLC3P0DOY3 106 aa7.23□□□□□ -1.25
SF3B6-201ENST00000233468 CXCL5P42830 114 aa7.23□□□□□ -1.25
SF3B6-201ENST00000233468 Q6ZRU5 148 aa7.23□□□□□ -1.25
SF3B6-201ENST00000233468 SCXQ7RTU7 201 aa7.23□□□□□ -1.25
SF3B6-201ENST00000233468 Q8IZM0 81 aa7.23□□□□□ -1.25
SF3B6-201ENST00000233468 TRAV12-1A0A0B4J245 112 aa7.22□□□□□ -1.25
SF3B6-201ENST00000233468 TRBV30A0A0K0K1B3 111 aa7.22□□□□□ -1.25
SF3B6-201ENST00000233468 CIRBPQ14011 172 aaKnown RBP7.22□□□□□ -1.25
SF3B6-201ENST00000233468 CIRBP-AS1Q8TBR5 109 aa7.22□□□□□ -1.25
SF3B6-201ENST00000233468 TOMM7Q9P0U1 55 aa7.22□□□□□ -1.25
SF3B6-201ENST00000233468 CHTOPQ9Y3Y2 248 aaKnown RBP7.22□□□□□ -1.25
SF3B6-201ENST00000233468 ATP6V1G1O75348 118 aa7.21□□□□□ -1.26
SF3B6-201ENST00000233468 KIAA0087Q14695 138 aa7.21□□□□□ -1.26
SF3B6-201ENST00000233468 MAJINQ3KP22 176 aa7.21□□□□□ -1.26
SF3B6-201ENST00000233468 FAM19A2Q8N3H0 131 aa7.21□□□□□ -1.26
SF3B6-201ENST00000233468 IGKV2-24A0A0C4DH68 120 aa7.2□□□□□ -1.26
SF3B6-201ENST00000233468 HIST1H2BKO60814 126 aa7.2□□□□□ -1.26
SF3B6-201ENST00000233468 PLA2G1BP04054 148 aaKnown RBP7.2□□□□□ -1.26
SF3B6-201ENST00000233468 HIST1H2BJP06899 126 aa7.2□□□□□ -1.26
SF3B6-201ENST00000233468 HIST1H2BOP23527 126 aa7.2□□□□□ -1.26
SF3B6-201ENST00000233468 HIST1H2BBP33778 126 aa7.2□□□□□ -1.26
SF3B6-201ENST00000233468 HIST1H2BDP58876 126 aa7.2□□□□□ -1.26
SF3B6-201ENST00000233468 HIST1H2BCP62807 126 aa7.2□□□□□ -1.26
SF3B6-201ENST00000233468 HIST2H2BEQ16778 126 aa7.2□□□□□ -1.26
SF3B6-201ENST00000233468 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.2□□□□□ -1.26
SF3B6-201ENST00000233468 SPACA4Q8TDM5 124 aa7.2□□□□□ -1.26
SF3B6-201ENST00000233468 HIST1H2BHQ93079 126 aa7.2□□□□□ -1.26
SF3B6-201ENST00000233468 HIST1H2BNQ99877 126 aa7.2□□□□□ -1.26
SF3B6-201ENST00000233468 HIST1H2BMQ99879 126 aa7.2□□□□□ -1.26
SF3B6-201ENST00000233468 SMIM1B2RUZ4 78 aa7.19□□□□□ -1.26
SF3B6-201ENST00000233468 TLX1NBP0CAT3 122 aa7.19□□□□□ -1.26
SF3B6-201ENST00000233468 PTTG1IPP53801 180 aa7.19□□□□□ -1.26
SF3B6-201ENST00000233468 RPL18AQ02543 176 aaKnown RBP7.19□□□□□ -1.26
SF3B6-201ENST00000233468 GAGE2BQ13066 116 aa7.19□□□□□ -1.26
SF3B6-201ENST00000233468 TMEM170BQ5T4T1 132 aa7.19□□□□□ -1.26
SF3B6-201ENST00000233468 UNQ6190/PRO20217Q6UXQ8 127 aa7.19□□□□□ -1.26
SF3B6-201ENST00000233468 COX7B2Q8TF08 81 aa7.19□□□□□ -1.26
SF3B6-201ENST00000233468 A0A096LNI7 61 aa7.18□□□□□ -1.26
SF3B6-201ENST00000233468 F8VRH5 84 aa7.18□□□□□ -1.26
SF3B6-201ENST00000233468 SPINK8P0C7L1 97 aa7.18□□□□□ -1.26
SF3B6-201ENST00000233468 SFTA2Q6UW10 78 aa7.18□□□□□ -1.26
SF3B6-201ENST00000233468 MAP1LC3CQ9BXW4 147 aa7.18□□□□□ -1.26
SF3B6-201ENST00000233468 PLAC8Q9NZF1 115 aa7.18□□□□□ -1.26
SF3B6-201ENST00000233468 A0A087WYN8 130 aa7.17□□□□□ -1.26
SF3B6-201ENST00000233468 CHTF8P0CG12 524 aa7.17□□□□□ -1.26
SF3B6-201ENST00000233468 FABP4P15090 132 aa7.17□□□□□ -1.26
SF3B6-201ENST00000233468 ZNF22P17026 224 aaPredicted RBP7.17□□□□□ -1.26
SF3B6-201ENST00000233468 C2orf82Q6UX34 121 aa7.17□□□□□ -1.26
SF3B6-201ENST00000233468 STPG4Q8N801 248 aa7.17□□□□□ -1.26
SF3B6-201ENST00000233468 C7orf33Q8WU49 177 aa7.17□□□□□ -1.26
SF3B6-201ENST00000233468 C6orf48Q9UBA6 75 aa7.17□□□□□ -1.26
SF3B6-201ENST00000233468 PLA2G2DQ9UNK4 145 aa7.17□□□□□ -1.26
SF3B6-201ENST00000233468 C11orf86A6NJI1 115 aa7.16□□□□□ -1.26
SF3B6-201ENST00000233468 NDUFC2-KCTD14E9PQ53 114 aa7.16□□□□□ -1.26
SF3B6-201ENST00000233468 H0Y8G0 127 aa7.16□□□□□ -1.26
SF3B6-201ENST00000233468 PLNP26678 52 aa7.16□□□□□ -1.26
SF3B6-201ENST00000233468 C10orf25Q5T742 122 aa7.16□□□□□ -1.26
SF3B6-201ENST00000233468 LCE4AQ5TA78 99 aa7.16□□□□□ -1.26
SF3B6-201ENST00000233468 IGLV5-39A0A0G2JS06 123 aa7.15□□□□□ -1.26
SF3B6-201ENST00000233468 PANO1I0J062 215 aa7.15□□□□□ -1.26
SF3B6-201ENST00000233468 NUPR1O60356 82 aa7.15□□□□□ -1.26
SF3B6-201ENST00000233468 LCE1DQ5T752 114 aa7.15□□□□□ -1.26
SF3B6-201ENST00000233468 COA6Q5JTJ3 125 aaKnown RBP7.14□□□□□ -1.27
SF3B6-201ENST00000233468 DPM2O94777 84 aa7.13□□□□□ -1.27
SF3B6-201ENST00000233468 RPL37AP61513 92 aaKnown RBP7.13□□□□□ -1.27
SF3B6-201ENST00000233468 ODF1Q14990 250 aa7.13□□□□□ -1.27
SF3B6-201ENST00000233468 GAGE2EQ4V326 116 aa7.13□□□□□ -1.27
SF3B6-201ENST00000233468 Q6ZRP5 223 aa7.13□□□□□ -1.27
SF3B6-201ENST00000233468 GAGE2DQ9UEU5 116 aa7.13□□□□□ -1.27
SF3B6-201ENST00000233468 TMEM223A0PJW6 202 aa7.12□□□□□ -1.27
SF3B6-201ENST00000233468 HERVK_113P61574 105 aa7.12□□□□□ -1.27
SF3B6-201ENST00000233468 IGKCP01834 107 aa7.11□□□□□ -1.27
SF3B6-201ENST00000233468 C9orf116Q5BN46 136 aaPredicted RBP7.11□□□□□ -1.27
SF3B6-201ENST00000233468 LINC00587B1AMM8 73 aa7.1□□□□□ -1.27
SF3B6-201ENST00000233468 SYS1-DBNDD2H3BUS1 97 aa7.1□□□□□ -1.27
SF3B6-201ENST00000233468 AKR1D1P51857 326 aa7.1□□□□□ -1.27
SF3B6-201ENST00000233468 COX17Q14061 63 aa7.1□□□□□ -1.27
SF3B6-201ENST00000233468 PET117Q6UWS5 81 aa7.1□□□□□ -1.27
SF3B6-201ENST00000233468 LRP1Q07954 4544 aaKnown RBP7.09□□□□□ -1.27
SF3B6-201ENST00000233468 S100A6P06703 90 aa7.09□□□□□ -1.27
SF3B6-201ENST00000233468 PLEKHB2Q96CS7 222 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms