RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 NDUFA4O00483 81 aa5.94□□□□□ -1.46
SPARC-201ENST00000231061 PRB2P02812 416 aaPredicted RBP5.94□□□□□ -1.46
SPARC-201ENST00000231061 Q1T7F1 81 aa5.94□□□□□ -1.46
SPARC-201ENST00000231061 C18orf65Q6ZTR6 163 aa5.94□□□□□ -1.46
SPARC-201ENST00000231061 C2CD3Q4AC94 2353 aa5.94□□□□□ -1.46
SPARC-201ENST00000231061 IGHV4-61A0A0C4DH41 118 aa5.94□□□□□ -1.46
SPARC-201ENST00000231061 F8VRH5 84 aa5.94□□□□□ -1.46
SPARC-201ENST00000231061 GNLYP22749 145 aa5.94□□□□□ -1.46
SPARC-201ENST00000231061 PRR3P79522 188 aaKnown RBP5.94□□□□□ -1.46
SPARC-201ENST00000231061 CXCL6P80162 114 aa5.94□□□□□ -1.46
SPARC-201ENST00000231061 RHPN1-AS1Q9BWJ2 59 aa5.94□□□□□ -1.46
SPARC-201ENST00000231061 ZNF580Q9UK33 172 aa5.94□□□□□ -1.46
SPARC-201ENST00000231061 C2orf66Q6UXQ4 117 aa5.93□□□□□ -1.46
SPARC-201ENST00000231061 LENEPQ9Y5L5 61 aa5.93□□□□□ -1.46
SPARC-201ENST00000231061 IGHV4-4A0A075B6R2 117 aa5.93□□□□□ -1.46
SPARC-201ENST00000231061 PLA2G1BP04054 148 aaKnown RBP5.93□□□□□ -1.46
SPARC-201ENST00000231061 CD28P10747 220 aa5.93□□□□□ -1.46
SPARC-201ENST00000231061 KLK9Q2XQG4 91 aa5.93□□□□□ -1.46
SPARC-201ENST00000231061 KLK9Q9UKQ9 250 aa5.93□□□□□ -1.46
SPARC-201ENST00000231061 IGKV3-20P01619 116 aa5.92□□□□□ -1.46
SPARC-201ENST00000231061 Q6ZS46 218 aa5.92□□□□□ -1.46
SPARC-201ENST00000231061 ADM2Q7Z4H4 148 aa5.92□□□□□ -1.46
SPARC-201ENST00000231061 DYNLRB2Q8TF09 96 aa5.92□□□□□ -1.46
SPARC-201ENST00000231061 ANKRD17O75179 2603 aaKnown RBP5.92□□□□□ -1.46
SPARC-201ENST00000231061 IGHV3-30P01768 117 aa5.92□□□□□ -1.46
SPARC-201ENST00000231061 IGHV3-30-5P0DP03 117 aa5.92□□□□□ -1.46
SPARC-201ENST00000231061 SCXQ7RTU7 201 aa5.92□□□□□ -1.46
SPARC-201ENST00000231061 CCL19Q99731 98 aa5.92□□□□□ -1.46
SPARC-201ENST00000231061 TMEM263Q8WUH6 116 aaKnown RBP5.91□□□□□ -1.46
SPARC-201ENST00000231061 USMG5Q96IX5 58 aa5.91□□□□□ -1.46
SPARC-201ENST00000231061 FAM74A4Q5TZK3 123 aa5.91□□□□□ -1.46
SPARC-201ENST00000231061 LINC00846Q9NV44 126 aa5.91□□□□□ -1.46
SPARC-201ENST00000231061 ICOSQ9Y6W8 199 aa5.91□□□□□ -1.46
SPARC-201ENST00000231061 TRAV12-1A0A0B4J245 112 aa5.91□□□□□ -1.46
SPARC-201ENST00000231061 TRBV30A0A0K0K1B3 111 aa5.91□□□□□ -1.46
SPARC-201ENST00000231061 ENHOQ6UWT2 76 aa5.91□□□□□ -1.46
SPARC-201ENST00000231061 K7EQG2 157 aa5.9□□□□□ -1.46
SPARC-201ENST00000231061 SOCS3O14543 225 aa5.9□□□□□ -1.46
SPARC-201ENST00000231061 ACANP16112 2415 aa5.9□□□□□ -1.46
SPARC-201ENST00000231061 A0A0J9YY99 117 aa5.9□□□□□ -1.46
SPARC-201ENST00000231061 RNASE3P12724 160 aaKnown RBP5.9□□□□□ -1.47
SPARC-201ENST00000231061 A6NED7 52 aa5.89□□□□□ -1.47
SPARC-201ENST00000231061 IGHV4-31P0DP07 118 aa5.89□□□□□ -1.47
SPARC-201ENST00000231061 IGHV4-30-2A0A087WSY4 118 aa5.89□□□□□ -1.47
SPARC-201ENST00000231061 PRRC2AP48634 2157 aaKnown RBP5.89□□□□□ -1.47
SPARC-201ENST00000231061 A6NDX4 124 aa5.89□□□□□ -1.47
SPARC-201ENST00000231061 EIF4EBP3O60516 100 aaPredicted RBP5.89□□□□□ -1.47
SPARC-201ENST00000231061 PPP1R17O96001 155 aa5.89□□□□□ -1.47
SPARC-201ENST00000231061 MUSTN1Q8IVN3 82 aa5.89□□□□□ -1.47
SPARC-201ENST00000231061 FLNCQ14315 2725 aa5.89□□□□□ -1.47
SPARC-201ENST00000231061 RPL39P62891 51 aaKnown RBP5.88□□□□□ -1.47
SPARC-201ENST00000231061 H3BUA1 57 aa5.88□□□□□ -1.47
SPARC-201ENST00000231061 SUMO4Q6EEV6 95 aa5.88□□□□□ -1.47
SPARC-201ENST00000231061 MSMBP08118 114 aa5.87□□□□□ -1.47
SPARC-201ENST00000231061 C11orf86A6NJI1 115 aa5.87□□□□□ -1.47
SPARC-201ENST00000231061 BBC3Q96PG8 261 aaPredicted RBP5.87□□□□□ -1.47
SPARC-201ENST00000231061 ITPR1Q14643 2758 aa5.87□□□□□ -1.47
SPARC-201ENST00000231061 UBR5O95071 2799 aaPredicted RBP5.86□□□□□ -1.47
SPARC-201ENST00000231061 HTN1P15515 57 aa5.86□□□□□ -1.47
SPARC-201ENST00000231061 C10orf99Q6UWK7 81 aa5.86□□□□□ -1.47
SPARC-201ENST00000231061 CELSR1Q9NYQ6 3014 aa5.86□□□□□ -1.47
SPARC-201ENST00000231061 SPINK13Q1W4C9 94 aa5.86□□□□□ -1.47
SPARC-201ENST00000231061 Q5VV11 94 aa5.86□□□□□ -1.47
SPARC-201ENST00000231061 C14orf132Q9NPU4 83 aa5.86□□□□□ -1.47
SPARC-201ENST00000231061 IGHV4-59P01825 116 aa5.85□□□□□ -1.47
SPARC-201ENST00000231061 IGLV1-40P01703 118 aa5.85□□□□□ -1.47
SPARC-201ENST00000231061 KIF25-AS1Q9Y6Z4 181 aa5.85□□□□□ -1.47
SPARC-201ENST00000231061 IGHV3-64A0A075B6Q5 118 aa5.84□□□□□ -1.47
SPARC-201ENST00000231061 I3L3M4 83 aa5.84□□□□□ -1.47
SPARC-201ENST00000231061 TSHBP01222 138 aa5.84□□□□□ -1.47
SPARC-201ENST00000231061 LINC00315P59091 139 aa5.84□□□□□ -1.47
SPARC-201ENST00000231061 F8P00451 2351 aa5.84□□□□□ -1.47
SPARC-201ENST00000231061 DEFB112Q30KQ8 113 aa5.84□□□□□ -1.47
SPARC-201ENST00000231061 MAPK1IP1LQ8NDC0 245 aa5.84□□□□□ -1.47
SPARC-201ENST00000231061 IGLV4-69A0A075B6H9 119 aa5.84□□□□□ -1.48
SPARC-201ENST00000231061 POLR2KP53803 58 aaKnown RBP5.84□□□□□ -1.48
SPARC-201ENST00000231061 hDV103S1A0JD37 113 aa5.83□□□□□ -1.48
SPARC-201ENST00000231061 C9orf116Q5BN46 136 aaPredicted RBP5.83□□□□□ -1.48
SPARC-201ENST00000231061 IGHV4OR15-8A0A075B7B6 117 aa5.83□□□□□ -1.48
SPARC-201ENST00000231061 IGHV1OR15-1A0A075B7D0 117 aa5.83□□□□□ -1.48
SPARC-201ENST00000231061 A0A087WW49 117 aa5.83□□□□□ -1.48
SPARC-201ENST00000231061 IGHV3-73A0A0B4J1V6 119 aa5.83□□□□□ -1.48
SPARC-201ENST00000231061 TRAV10A0A0B4J240 114 aa5.83□□□□□ -1.48
SPARC-201ENST00000231061 IGHV3OR16-9A0A0B4J2B5 98 aa5.83□□□□□ -1.48
SPARC-201ENST00000231061 IGHV3-16A0A0C4DH30 117 aa5.83□□□□□ -1.48
SPARC-201ENST00000231061 IGIPA6NJ69 53 aa5.83□□□□□ -1.48
SPARC-201ENST00000231061 HIGD2BQ4VC39 106 aa5.83□□□□□ -1.48
SPARC-201ENST00000231061 A0A0J9YX75 114 aa5.83□□□□□ -1.48
SPARC-201ENST00000231061 C20orf203Q8NBC4 194 aa5.83□□□□□ -1.48
SPARC-201ENST00000231061 TSPEAR-AS2P59090 65 aa5.82□□□□□ -1.48
SPARC-201ENST00000231061 COX6B1P14854 86 aa5.82□□□□□ -1.48
SPARC-201ENST00000231061 LINC00476Q8WZB0 136 aa5.82□□□□□ -1.48
SPARC-201ENST00000231061 ZNF625Q96I27 306 aaPredicted RBP5.82□□□□□ -1.48
SPARC-201ENST00000231061 PRR15LQ9BU68 103 aa5.82□□□□□ -1.48
SPARC-201ENST00000231061 C1orf134Q5TEV5 83 aa5.82□□□□□ -1.48
SPARC-201ENST00000231061 TMEM254Q8TBM7 123 aa5.82□□□□□ -1.48
SPARC-201ENST00000231061 FSHBP01225 129 aa5.81□□□□□ -1.48
SPARC-201ENST00000231061 TEX15Q9BXT5 2789 aa5.81□□□□□ -1.48
SPARC-201ENST00000231061 MOBPQ13875 183 aa5.81□□□□□ -1.48
SPARC-201ENST00000231061 Q6ZTC4 211 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms