RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 DEFB130AP0DP74 79 aa12.06□□□□□ -0.48
USB1-201ENST00000219281 IBA57-AS1B1ANH7 110 aa12.05□□□□□ -0.48
USB1-201ENST00000219281 LINC00643Q86TS7 51 aa12.04□□□□□ -0.48
USB1-201ENST00000219281 C11orf68Q9H3H3 251 aaKnown RBP12.04□□□□□ -0.48
USB1-201ENST00000219281 LINC00959A0A1B0GUT2 108 aa12.04□□□□□ -0.48
USB1-201ENST00000219281 INAFM2P0DMQ5 153 aa12.04□□□□□ -0.48
USB1-201ENST00000219281 GAGE2AQ6NT46 116 aa12.04□□□□□ -0.48
USB1-201ENST00000219281 FAM236AA0A1B0GUQ0 79 aa12.03□□□□□ -0.48
USB1-201ENST00000219281 FAM236BA0A1B0GV22 79 aa12.03□□□□□ -0.48
USB1-201ENST00000219281 DNAL4O96015 105 aa12.03□□□□□ -0.48
USB1-201ENST00000219281 PAX4O43316 350 aa12.03□□□□□ -0.48
USB1-201ENST00000219281 IMUPQ9GZP8 106 aa12.03□□□□□ -0.48
USB1-201ENST00000219281 ATP5G1P05496 136 aa12.02□□□□□ -0.49
USB1-201ENST00000219281 C6orf226Q5I0X4 101 aa12.02□□□□□ -0.49
USB1-201ENST00000219281 SDIM1Q6ZPB5 146 aa12.02□□□□□ -0.49
USB1-201ENST00000219281 FN1P02751 2386 aaKnown RBP12.01□□□□□ -0.49
USB1-201ENST00000219281 OR13C6PQ8NH95 151 aa12.01□□□□□ -0.49
USB1-201ENST00000219281 XCL1P47992 114 aa12□□□□□ -0.49
USB1-201ENST00000219281 H0YGX0 51 aa12□□□□□ -0.49
USB1-201ENST00000219281 GYPEP15421 78 aa12□□□□□ -0.49
USB1-201ENST00000219281 C9orf129Q5T035 196 aaKnown RBP12□□□□□ -0.49
USB1-201ENST00000219281 INAFM1C9JVW0 142 aa11.98□□□□□ -0.49
USB1-201ENST00000219281 LECT2O14960 151 aa11.98□□□□□ -0.49
USB1-201ENST00000219281 CLPSL2Q6UWE3 100 aa11.98□□□□□ -0.49
USB1-201ENST00000219281 NSD1Q96L73 2696 aaPredicted RBP11.97□□□□□ -0.49
USB1-201ENST00000219281 KIR2DL5BQ8NHK3 375 aa11.97□□□□□ -0.49
USB1-201ENST00000219281 C14orf132Q9NPU4 83 aa11.97□□□□□ -0.49
USB1-201ENST00000219281 A0A096LPF7 62 aa11.97□□□□□ -0.49
USB1-201ENST00000219281 SS18Q15532 418 aa11.97□□□□□ -0.49
USB1-201ENST00000219281 HIVEP1P15822 2718 aa11.97□□□□□ -0.49
USB1-201ENST00000219281 VWFP04275 2813 aa11.95□□□□□ -0.5
USB1-201ENST00000219281 SLPIP03973 132 aa11.95□□□□□ -0.5
USB1-201ENST00000219281 LINC00612Q8N6U2 182 aa11.94□□□□□ -0.5
USB1-201ENST00000219281 C3orf56Q8N813 242 aa11.94□□□□□ -0.5
USB1-201ENST00000219281 A0A1B0GUV1 79 aa11.94□□□□□ -0.5
USB1-201ENST00000219281 Q8IZM0 81 aa11.93□□□□□ -0.5
USB1-201ENST00000219281 LINC00482Q8N8I6 264 aa11.93□□□□□ -0.5
USB1-201ENST00000219281 CXCL5P42830 114 aa11.93□□□□□ -0.5
USB1-201ENST00000219281 SPATA3Q8NHX4 192 aa11.93□□□□□ -0.5
USB1-201ENST00000219281 NCR3O14931 201 aa11.92□□□□□ -0.5
USB1-201ENST00000219281 OBSCN-AS1Q96MR7 158 aa11.91□□□□□ -0.5
USB1-201ENST00000219281 X6R8D5 127 aa11.91□□□□□ -0.5
USB1-201ENST00000219281 PRO0255Q9UI72 69 aa11.91□□□□□ -0.5
USB1-201ENST00000219281 PRR3P79522 188 aaKnown RBP11.9□□□□□ -0.5
USB1-201ENST00000219281 KLK5Q9Y337 293 aaPredicted RBP11.9□□□□□ -0.5
USB1-201ENST00000219281 TENM1Q9UKZ4 2725 aa11.9□□□□□ -0.5
USB1-201ENST00000219281 LINC00269Q8N2A0 174 aa11.88□□□□□ -0.51
USB1-201ENST00000219281 ORMDL1Q9P0S3 153 aa11.88□□□□□ -0.51
USB1-201ENST00000219281 LINC00846Q9NV44 126 aa11.88□□□□□ -0.51
USB1-201ENST00000219281 C3orf22Q8N5N4 141 aa11.87□□□□□ -0.51
USB1-201ENST00000219281 IGLV10-54A0A075B6I4 117 aa11.86□□□□□ -0.51
USB1-201ENST00000219281 NANOS2P60321 138 aaKnown RBP11.86□□□□□ -0.51
USB1-201ENST00000219281 SMIM20Q8N5G0 67 aa11.86□□□□□ -0.51
USB1-201ENST00000219281 TRRAPQ9Y4A5 3859 aa11.86□□□□□ -0.51
USB1-201ENST00000219281 KIAA0087Q14695 138 aa11.86□□□□□ -0.51
USB1-201ENST00000219281 LINC01561Q8N1V8 128 aa11.86□□□□□ -0.51
USB1-201ENST00000219281 Q8N3U1 123 aa11.86□□□□□ -0.51
USB1-201ENST00000219281 IGKV3D-7A0A0C4DH55 119 aa11.85□□□□□ -0.51
USB1-201ENST00000219281 DEFB4AO15263 64 aa11.85□□□□□ -0.51
USB1-201ENST00000219281 CFAP161Q6P656 301 aa11.85□□□□□ -0.51
USB1-201ENST00000219281 SVIPQ8NHG7 77 aa11.85□□□□□ -0.51
USB1-201ENST00000219281 SMIM9A6NGZ8 99 aa11.85□□□□□ -0.51
USB1-201ENST00000219281 C9orf153Q5TBE3 101 aa11.85□□□□□ -0.51
USB1-201ENST00000219281 CD164L2Q6UWJ8 174 aa11.85□□□□□ -0.51
USB1-201ENST00000219281 CHCHD10Q8WYQ3 142 aaPredicted RBP11.85□□□□□ -0.51
USB1-201ENST00000219281 ANGP03950 147 aaKnown RBP11.84□□□□□ -0.51
USB1-201ENST00000219281 C9orf116Q5BN46 136 aaPredicted RBP11.84□□□□□ -0.51
USB1-201ENST00000219281 TMEM126AQ9H061 195 aa11.84□□□□□ -0.51
USB1-201ENST00000219281 UQCRQO14949 82 aa11.83□□□□□ -0.52
USB1-201ENST00000219281 Q6JHZ5 121 aa11.82□□□□□ -0.52
USB1-201ENST00000219281 Q8N814 137 aa11.82□□□□□ -0.52
USB1-201ENST00000219281 LINC00167Q96N53 147 aa11.82□□□□□ -0.52
USB1-201ENST00000219281 ATRQ13535 2644 aa11.82□□□□□ -0.52
USB1-201ENST00000219281 HIST1H4AP62805 103 aaKnown RBP11.81□□□□□ -0.52
USB1-201ENST00000219281 REG3AQ06141 175 aa11.81□□□□□ -0.52
USB1-201ENST00000219281 NBEAL2Q6ZNJ1 2754 aa11.81□□□□□ -0.52
USB1-201ENST00000219281 LYRM9A8MSI8 78 aa11.81□□□□□ -0.52
USB1-201ENST00000219281 NDUFC2O95298 119 aa11.81□□□□□ -0.52
USB1-201ENST00000219281 COX17Q14061 63 aa11.81□□□□□ -0.52
USB1-201ENST00000219281 LINC00526Q96FQ7 95 aa11.8□□□□□ -0.52
USB1-201ENST00000219281 DEFB135Q30KP9 77 aa11.8□□□□□ -0.52
USB1-201ENST00000219281 CCKP06307 115 aa11.79□□□□□ -0.52
USB1-201ENST00000219281 COX7CP15954 63 aa11.79□□□□□ -0.52
USB1-201ENST00000219281 A0A1B0GX51 115 aa11.79□□□□□ -0.52
USB1-201ENST00000219281 Q8NDZ9 215 aa11.79□□□□□ -0.52
USB1-201ENST00000219281 IGHV4-28A0A0C4DH34 117 aa11.78□□□□□ -0.52
USB1-201ENST00000219281 C2orf48Q96LS8 159 aa11.78□□□□□ -0.52
USB1-201ENST00000219281 TEP1Q99973 2627 aaKnown RBP11.78□□□□□ -0.52
USB1-201ENST00000219281 A0A087WVE0 104 aa11.77□□□□□ -0.52
USB1-201ENST00000219281 ATOX1O00244 68 aa11.77□□□□□ -0.52
USB1-201ENST00000219281 C9orf66Q5T8R8 295 aa11.77□□□□□ -0.53
USB1-201ENST00000219281 TMEM256-PLSCR3K7ERE1 68 aa11.76□□□□□ -0.53
USB1-201ENST00000219281 DAD1P61803 113 aa11.76□□□□□ -0.53
USB1-201ENST00000219281 JMJD7-PLA2G4BH0Y9G9 81 aa11.76□□□□□ -0.53
USB1-201ENST00000219281 RPL18AQ02543 176 aaKnown RBP11.76□□□□□ -0.53
USB1-201ENST00000219281 C6orf99Q4VX62 202 aa11.76□□□□□ -0.53
USB1-201ENST00000219281 C6orf223Q8N319 242 aa11.75□□□□□ -0.53
USB1-201ENST00000219281 S100A7L2Q5SY68 101 aa11.74□□□□□ -0.53
USB1-201ENST00000219281 C10orf25Q5T742 122 aa11.74□□□□□ -0.53
USB1-201ENST00000219281 FLNBO75369 2602 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms