RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 SS18Q15532 418 aa7.05□□□□□ -1.28
USP11-201ENST00000218348 C2orf82Q6UX34 121 aa7.05□□□□□ -1.28
USP11-201ENST00000218348 FAM19A1Q7Z5A9 133 aa7.05□□□□□ -1.28
USP11-201ENST00000218348 CSNK1G2-AS1Q8NCQ2 148 aa7.05□□□□□ -1.28
USP11-201ENST00000218348 C16orf74Q96GX8 76 aa7.05□□□□□ -1.28
USP11-201ENST00000218348 UBE2D1P51668 147 aa7.04□□□□□ -1.28
USP11-201ENST00000218348 MUSTN1Q8IVN3 82 aa7.04□□□□□ -1.28
USP11-201ENST00000218348 AMELXQ99217 191 aa7.04□□□□□ -1.28
USP11-201ENST00000218348 NDUFA12Q9UI09 145 aa7.04□□□□□ -1.28
USP11-201ENST00000218348 LEPROTO15243 131 aa7.03□□□□□ -1.28
USP11-201ENST00000218348 LINC01620Q4KN68 170 aa7.03□□□□□ -1.28
USP11-201ENST00000218348 TOMM7Q9P0U1 55 aa7.03□□□□□ -1.28
USP11-201ENST00000218348 CFC1BP0CG36 223 aa7.03□□□□□ -1.28
USP11-201ENST00000218348 CFC1P0CG37 223 aa7.03□□□□□ -1.28
USP11-201ENST00000218348 SMCR5Q8TEV8 140 aa7.03□□□□□ -1.28
USP11-201ENST00000218348 C11orf68Q9H3H3 251 aaKnown RBP7.03□□□□□ -1.28
USP11-201ENST00000218348 OXLD1Q5BKU9 147 aa7.02□□□□□ -1.28
USP11-201ENST00000218348 ADAMTSL4-AS1Q5T5F5 129 aa7.02□□□□□ -1.29
USP11-201ENST00000218348 DNAH9Q9NYC9 4486 aa7.02□□□□□ -1.29
USP11-201ENST00000218348 A0A0J9YXY3 114 aa7.02□□□□□ -1.29
USP11-201ENST00000218348 EIF4EBP3O60516 100 aaPredicted RBP7.02□□□□□ -1.29
USP11-201ENST00000218348 MRPS36P82909 103 aaKnown RBP7.02□□□□□ -1.29
USP11-201ENST00000218348 FAM222AQ5U5X8 452 aa7.02□□□□□ -1.29
USP11-201ENST00000218348 MEGF8Q7Z7M0 2845 aa7.01□□□□□ -1.29
USP11-201ENST00000218348 IGHV3-30P01768 117 aa7.01□□□□□ -1.29
USP11-201ENST00000218348 IGHV3-30-5P0DP03 117 aa7.01□□□□□ -1.29
USP11-201ENST00000218348 DAZ2Q13117 558 aaKnown RBP7.01□□□□□ -1.29
USP11-201ENST00000218348 WFDC9Q8NEX5 89 aa7.01□□□□□ -1.29
USP11-201ENST00000218348 TENM3Q9P273 2699 aa7.01□□□□□ -1.29
USP11-201ENST00000218348 IGLV4-60A0A075B6I1 120 aa7.01□□□□□ -1.29
USP11-201ENST00000218348 GYPEP15421 78 aa7.01□□□□□ -1.29
USP11-201ENST00000218348 CMC4P56277 68 aaPredicted RBP7.01□□□□□ -1.29
USP11-201ENST00000218348 FHL2Q14192 279 aa7.01□□□□□ -1.29
USP11-201ENST00000218348 TMEM243Q9BU79 118 aa7.01□□□□□ -1.29
USP11-201ENST00000218348 MGAM2Q2M2H8 2515 aa7□□□□□ -1.29
USP11-201ENST00000218348 LINC00242Q5T6M2 205 aa7□□□□□ -1.29
USP11-201ENST00000218348 PRO1854Q9UHT4 67 aa7□□□□□ -1.29
USP11-201ENST00000218348 IGHV1-58A0A0C4DH39 117 aa7□□□□□ -1.29
USP11-201ENST00000218348 Q8N3U1 123 aa7□□□□□ -1.29
USP11-201ENST00000218348 VSIG2Q96IQ7 327 aa7□□□□□ -1.29
USP11-201ENST00000218348 LINC00474Q9P2X8 69 aa7□□□□□ -1.29
USP11-201ENST00000218348 DNAH7Q8WXX0 4024 aa7□□□□□ -1.29
USP11-201ENST00000218348 HUWE1Q7Z6Z7 4374 aaKnown RBP7□□□□□ -1.29
USP11-201ENST00000218348 PIK3CD-AS1Q5SR53 167 aa6.99□□□□□ -1.29
USP11-201ENST00000218348 Q9H8V8 135 aa6.99□□□□□ -1.29
USP11-201ENST00000218348 RPL13AP40429 203 aaKnown RBP6.99□□□□□ -1.29
USP11-201ENST00000218348 S100A7L2Q5SY68 101 aa6.99□□□□□ -1.29
USP11-201ENST00000218348 C9orf66Q5T8R8 295 aa6.99□□□□□ -1.29
USP11-201ENST00000218348 DAZ4Q86SG3 579 aaKnown RBP6.99□□□□□ -1.29
USP11-201ENST00000218348 DAZ3Q9NR90 486 aaKnown RBP6.99□□□□□ -1.29
USP11-201ENST00000218348 X6R8D5 127 aa6.99□□□□□ -1.29
USP11-201ENST00000218348 C5orf38Q86SI9 138 aa6.99□□□□□ -1.29
USP11-201ENST00000218348 TRBV10-1A0A0K0K1A3 114 aa6.98□□□□□ -1.29
USP11-201ENST00000218348 PMAIP1Q13794 54 aa6.98□□□□□ -1.29
USP11-201ENST00000218348 A0A087WVE0 104 aa6.98□□□□□ -1.29
USP11-201ENST00000218348 SDIM1Q6ZPB5 146 aa6.98□□□□□ -1.29
USP11-201ENST00000218348 CDC42SE2Q9NRR3 84 aa6.98□□□□□ -1.29
USP11-201ENST00000218348 TRBV10-2A0A0K0K1G8 114 aa6.98□□□□□ -1.29
USP11-201ENST00000218348 ATXN8Q156A1 80 aa6.98□□□□□ -1.29
USP11-201ENST00000218348 CELA1Q9UNI1 258 aa6.98□□□□□ -1.29
USP11-201ENST00000218348 IGLV10-54A0A075B6I4 117 aa6.97□□□□□ -1.29
USP11-201ENST00000218348 IGHV4-28A0A0C4DH34 117 aa6.97□□□□□ -1.29
USP11-201ENST00000218348 PRB2P02812 416 aaPredicted RBP6.97□□□□□ -1.29
USP11-201ENST00000218348 H7C423 109 aa6.96□□□□□ -1.29
USP11-201ENST00000218348 ATOX1O00244 68 aa6.96□□□□□ -1.29
USP11-201ENST00000218348 RBM3P98179 157 aaKnown RBP6.96□□□□□ -1.29
USP11-201ENST00000218348 IMUPQ9GZP8 106 aa6.96□□□□□ -1.29
USP11-201ENST00000218348 XCL1P47992 114 aa6.96□□□□□ -1.3
USP11-201ENST00000218348 FP248Q71RG6 208 aaPredicted RBP6.96□□□□□ -1.3
USP11-201ENST00000218348 OVOL2Q9BRP0 275 aa6.96□□□□□ -1.3
USP11-201ENST00000218348 SPANXCQ9NY87 97 aa6.96□□□□□ -1.3
USP11-201ENST00000218348 COL7A1Q02388 2944 aa6.96□□□□□ -1.3
USP11-201ENST00000218348 TRBV6-8A0A0A6YYG3 113 aa6.96□□□□□ -1.3
USP11-201ENST00000218348 TRBV6-4A0A1B0GX49 114 aa6.96□□□□□ -1.3
USP11-201ENST00000218348 PAX4O43316 350 aa6.96□□□□□ -1.3
USP11-201ENST00000218348 CLEC2BQ92478 149 aa6.96□□□□□ -1.3
USP11-201ENST00000218348 IGKV3D-7A0A0C4DH55 119 aa6.95□□□□□ -1.3
USP11-201ENST00000218348 IGHV4-30-4P0DP06 118 aa6.95□□□□□ -1.3
USP11-201ENST00000218348 MPLKIPQ8TAP9 179 aa6.95□□□□□ -1.3
USP11-201ENST00000218348 C11orf45Q8TAV5 145 aa6.95□□□□□ -1.3
USP11-201ENST00000218348 DAD1P61803 113 aa6.95□□□□□ -1.3
USP11-201ENST00000218348 UPK3BQ9BT76 320 aa6.95□□□□□ -1.3
USP11-201ENST00000218348 SMIM1B2RUZ4 78 aa6.94□□□□□ -1.3
USP11-201ENST00000218348 H3BT86 120 aa6.94□□□□□ -1.3
USP11-201ENST00000218348 EGFEM1PQ0D2K5 195 aa6.94□□□□□ -1.3
USP11-201ENST00000218348 KPRPQ5T749 579 aaPredicted RBP6.94□□□□□ -1.3
USP11-201ENST00000218348 DYNC2H1Q8NCM8 4307 aaKnown RBP6.94□□□□□ -1.3
USP11-201ENST00000218348 LINC00643Q86TS7 51 aa6.94□□□□□ -1.3
USP11-201ENST00000218348 LITAFQ99732 161 aa6.94□□□□□ -1.3
USP11-201ENST00000218348 IGHV3-33P01772 117 aa6.93□□□□□ -1.3
USP11-201ENST00000218348 SERP2Q8N6R1 65 aa6.93□□□□□ -1.3
USP11-201ENST00000218348 TRIAP1O43715 76 aa6.92□□□□□ -1.3
USP11-201ENST00000218348 ATP5G1P05496 136 aa6.92□□□□□ -1.3
USP11-201ENST00000218348 NDUFC2O95298 119 aa6.92□□□□□ -1.3
USP11-201ENST00000218348 RPL18AQ02543 176 aaKnown RBP6.92□□□□□ -1.3
USP11-201ENST00000218348 C20orf197Q8N268 126 aa6.92□□□□□ -1.3
USP11-201ENST00000218348 PRO0255Q9UI72 69 aa6.92□□□□□ -1.3
USP11-201ENST00000218348 FAM240AA0A1B0GVK7 77 aa6.91□□□□□ -1.3
USP11-201ENST00000218348 KRTAP10-11P60412 298 aa6.91□□□□□ -1.3
USP11-201ENST00000218348 APOC4P55056 127 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 747 ms