RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 TMEM141Q96I45 108 aa6.63□□□□□ -1.35
PHGDH-222ENST00000641587 TIMM17AQ99595 171 aa6.63□□□□□ -1.35
PHGDH-222ENST00000641587 OPRPNQ99935 248 aaPredicted RBP6.63□□□□□ -1.35
PHGDH-222ENST00000641587 TIMM21Q9BVV7 248 aa6.63□□□□□ -1.35
PHGDH-222ENST00000641587 IGLV4-3A0A075B6K6 122 aa6.62□□□□□ -1.35
PHGDH-222ENST00000641587 IGKV3OR2-268A0A0C4DH90 116 aa6.62□□□□□ -1.35
PHGDH-222ENST00000641587 IGIPA6NJ69 53 aa6.62□□□□□ -1.35
PHGDH-222ENST00000641587 IFITM10A6NMD0 228 aa6.62□□□□□ -1.35
PHGDH-222ENST00000641587 IBA57-AS1B1ANH7 110 aa6.62□□□□□ -1.35
PHGDH-222ENST00000641587 LECT2O14960 151 aa6.62□□□□□ -1.35
PHGDH-222ENST00000641587 ANGP03950 147 aaKnown RBP6.62□□□□□ -1.35
PHGDH-222ENST00000641587 PLA2G1BP04054 148 aaKnown RBP6.62□□□□□ -1.35
PHGDH-222ENST00000641587 PRSS1P07477 247 aa6.62□□□□□ -1.35
PHGDH-222ENST00000641587 RBX1P62877 108 aa6.62□□□□□ -1.35
PHGDH-222ENST00000641587 LINC01620Q4KN68 170 aa6.62□□□□□ -1.35
PHGDH-222ENST00000641587 LINC01556Q5JQF7 62 aa6.62□□□□□ -1.35
PHGDH-222ENST00000641587 PAPPA-AS1Q5QFB9 102 aa6.62□□□□□ -1.35
PHGDH-222ENST00000641587 Q6ZSA8 131 aa6.62□□□□□ -1.35
PHGDH-222ENST00000641587 Q8N3U1 123 aa6.62□□□□□ -1.35
PHGDH-222ENST00000641587 Q8N976 141 aa6.62□□□□□ -1.35
PHGDH-222ENST00000641587 PACRGQ96M98 296 aaPredicted RBP6.62□□□□□ -1.35
PHGDH-222ENST00000641587 MAP1LC3CQ9BXW4 147 aa6.62□□□□□ -1.35
PHGDH-222ENST00000641587 PYGO1Q9Y3Y4 419 aa6.62□□□□□ -1.35
PHGDH-222ENST00000641587 IGLV4-60A0A075B6I1 120 aa6.61□□□□□ -1.35
PHGDH-222ENST00000641587 CLPSL2Q6UWE3 100 aa6.61□□□□□ -1.35
PHGDH-222ENST00000641587 ZNF664Q8N3J9 261 aa6.61□□□□□ -1.35
PHGDH-222ENST00000641587 OR10D4PQ8NGN7 298 aa6.61□□□□□ -1.35
PHGDH-222ENST00000641587 VCX2Q9H322 139 aa6.61□□□□□ -1.35
PHGDH-222ENST00000641587 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.6□□□□□ -1.35
PHGDH-222ENST00000641587 A0A1B0GUV1 79 aa6.6□□□□□ -1.35
PHGDH-222ENST00000641587 NPSP0C0P6 89 aa6.6□□□□□ -1.35
PHGDH-222ENST00000641587 AKR1D1P51857 326 aa6.6□□□□□ -1.35
PHGDH-222ENST00000641587 KRTAP10-4P60372 401 aaPredicted RBP6.6□□□□□ -1.35
PHGDH-222ENST00000641587 MRPS36P82909 103 aaKnown RBP6.6□□□□□ -1.35
PHGDH-222ENST00000641587 ZC2HC1BQ5TFG8 222 aa6.6□□□□□ -1.35
PHGDH-222ENST00000641587 TEX43Q6ZNM6 134 aa6.6□□□□□ -1.35
PHGDH-222ENST00000641587 SCXQ7RTU7 201 aa6.6□□□□□ -1.35
PHGDH-222ENST00000641587 BAALCQ8WXS3 180 aa6.6□□□□□ -1.35
PHGDH-222ENST00000641587 C2orf88Q9BSF0 95 aa6.6□□□□□ -1.35
PHGDH-222ENST00000641587 KLK12Q9UKR0 248 aa6.6□□□□□ -1.35
PHGDH-222ENST00000641587 CSDC2Q9Y534 153 aaKnown RBP6.6□□□□□ -1.35
PHGDH-222ENST00000641587 CRPP02741 224 aa6.59□□□□□ -1.35
PHGDH-222ENST00000641587 C3orf79P0CE67 100 aa6.59□□□□□ -1.35
PHGDH-222ENST00000641587 PMVKQ15126 192 aa6.59□□□□□ -1.35
PHGDH-222ENST00000641587 LINC00269Q8N2A0 174 aa6.59□□□□□ -1.35
PHGDH-222ENST00000641587 CDC42SE2Q9NRR3 84 aa6.59□□□□□ -1.35
PHGDH-222ENST00000641587 TRAV13-1A0A0B4J241 112 aa6.58□□□□□ -1.36
PHGDH-222ENST00000641587 C20orf202A1L168 122 aa6.58□□□□□ -1.36
PHGDH-222ENST00000641587 SYS1-DBNDD2H3BUS1 97 aa6.58□□□□□ -1.36
PHGDH-222ENST00000641587 SERTAD4-AS1Q5TG53 156 aa6.58□□□□□ -1.36
PHGDH-222ENST00000641587 REG3AQ06141 175 aa6.57□□□□□ -1.36
PHGDH-222ENST00000641587 PET117Q6UWS5 81 aa6.57□□□□□ -1.36
PHGDH-222ENST00000641587 FAM104AQ969W3 186 aa6.57□□□□□ -1.36
PHGDH-222ENST00000641587 UBE2WQ96B02 151 aa6.57□□□□□ -1.36
PHGDH-222ENST00000641587 AMELXQ99217 191 aa6.57□□□□□ -1.36
PHGDH-222ENST00000641587 PMCHL2Q9BQD1 86 aa6.57□□□□□ -1.36
PHGDH-222ENST00000641587 CST9LQ9H4G1 147 aa6.57□□□□□ -1.36
PHGDH-222ENST00000641587 PLA2G2DQ9UNK4 145 aa6.57□□□□□ -1.36
PHGDH-222ENST00000641587 CHTOPQ9Y3Y2 248 aaKnown RBP6.57□□□□□ -1.36
PHGDH-222ENST00000641587 TRAV12-1A0A0B4J245 112 aa6.56□□□□□ -1.36
PHGDH-222ENST00000641587 SCGB1D1O95968 90 aa6.56□□□□□ -1.36
PHGDH-222ENST00000641587 SS18Q15532 418 aa6.56□□□□□ -1.36
PHGDH-222ENST00000641587 IGLV10-54A0A075B6I4 117 aa6.55□□□□□ -1.36
PHGDH-222ENST00000641587 A0A0J9YXV3 536 aa6.55□□□□□ -1.36
PHGDH-222ENST00000641587 ODF1Q14990 250 aa6.55□□□□□ -1.36
PHGDH-222ENST00000641587 GEMIN7Q9H840 131 aaKnown RBP6.55□□□□□ -1.36
PHGDH-222ENST00000641587 MRPL35Q9NZE8 188 aaKnown RBP6.55□□□□□ -1.36
PHGDH-222ENST00000641587 LINC00959A0A1B0GUT2 108 aa6.54□□□□□ -1.36
PHGDH-222ENST00000641587 LOC105371267A0A1B0GV96 52 aa6.54□□□□□ -1.36
PHGDH-222ENST00000641587 F8VRH5 84 aa6.54□□□□□ -1.36
PHGDH-222ENST00000641587 UBE2D1P51668 147 aa6.54□□□□□ -1.36
PHGDH-222ENST00000641587 LINC01545Q5VT33 79 aa6.54□□□□□ -1.36
PHGDH-222ENST00000641587 CHAC1Q9BUX1 264 aa6.54□□□□□ -1.36
PHGDH-222ENST00000641587 TM2D2Q9BX73 214 aa6.54□□□□□ -1.36
PHGDH-222ENST00000641587 IGKV2D-24A0A075B6R9 120 aa6.53□□□□□ -1.36
PHGDH-222ENST00000641587 CCL25O15444 150 aa6.53□□□□□ -1.36
PHGDH-222ENST00000641587 DPM2O94777 84 aa6.53□□□□□ -1.36
PHGDH-222ENST00000641587 OXTP01178 125 aa6.53□□□□□ -1.36
PHGDH-222ENST00000641587 IGKCP01834 107 aa6.53□□□□□ -1.36
PHGDH-222ENST00000641587 PLNP26678 52 aa6.53□□□□□ -1.36
PHGDH-222ENST00000641587 XCL1P47992 114 aa6.53□□□□□ -1.36
PHGDH-222ENST00000641587 HNRNPA3P51991 378 aaKnown RBP6.53□□□□□ -1.36
PHGDH-222ENST00000641587 SEC11AP67812 179 aa6.53□□□□□ -1.36
PHGDH-222ENST00000641587 MIAQ16674 131 aa6.53□□□□□ -1.36
PHGDH-222ENST00000641587 ENHOQ6UWT2 76 aa6.53□□□□□ -1.36
PHGDH-222ENST00000641587 ATOH7Q8N100 152 aa6.53□□□□□ -1.36
PHGDH-222ENST00000641587 LINC00469Q8N7U9 141 aa6.53□□□□□ -1.36
PHGDH-222ENST00000641587 CIRBP-AS1Q8TBR5 109 aa6.53□□□□□ -1.36
PHGDH-222ENST00000641587 CHCHD10Q8WYQ3 142 aaPredicted RBP6.53□□□□□ -1.36
PHGDH-222ENST00000641587 PRR34Q9NV39 138 aa6.53□□□□□ -1.36
PHGDH-222ENST00000641587 IGLV4-69A0A075B6H9 119 aa6.52□□□□□ -1.37
PHGDH-222ENST00000641587 TRAV8-3A0A0A6YYJ7 113 aa6.52□□□□□ -1.37
PHGDH-222ENST00000641587 TINCRA0A1B0GVN0 87 aa6.52□□□□□ -1.37
PHGDH-222ENST00000641587 C11orf86A6NJI1 115 aa6.52□□□□□ -1.37
PHGDH-222ENST00000641587 IGLC3P0DOY3 106 aa6.52□□□□□ -1.37
PHGDH-222ENST00000641587 HERVK_113P63121 156 aa6.52□□□□□ -1.37
PHGDH-222ENST00000641587 TMEM170BQ5T4T1 132 aa6.52□□□□□ -1.37
PHGDH-222ENST00000641587 RMI2Q96E14 147 aa6.52□□□□□ -1.37
PHGDH-222ENST00000641587 C1orf43Q9BWL3 253 aa6.52□□□□□ -1.37
PHGDH-222ENST00000641587 TRAV8-4A0A0B4J246 113 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms