RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 UBE2D1P51668 147 aa8.71□□□□□ -1.02
PHGDH-218ENST00000641491 CD164L2Q6UWJ8 174 aa8.71□□□□□ -1.02
PHGDH-218ENST00000641491 CHAC1Q9BUX1 264 aa8.71□□□□□ -1.02
PHGDH-218ENST00000641491 ALMS1Q8TCU4 4167 aa8.7□□□□□ -1.02
PHGDH-218ENST00000641491 TINCRA0A1B0GVN0 87 aa8.7□□□□□ -1.02
PHGDH-218ENST00000641491 F8VRH5 84 aa8.7□□□□□ -1.02
PHGDH-218ENST00000641491 C14orf177Q52M58 125 aa8.7□□□□□ -1.02
PHGDH-218ENST00000641491 ZC2HC1BQ5TFG8 222 aa8.7□□□□□ -1.02
PHGDH-218ENST00000641491 PET117Q6UWS5 81 aa8.7□□□□□ -1.02
PHGDH-218ENST00000641491 Q6ZR54 194 aa8.7□□□□□ -1.02
PHGDH-218ENST00000641491 HIST1H2BLQ99880 126 aa8.7□□□□□ -1.02
PHGDH-218ENST00000641491 KRTAP1-5Q9BYS1 174 aa8.7□□□□□ -1.02
PHGDH-218ENST00000641491 FRAS1Q86XX4 4008 aa8.69□□□□□ -1.02
PHGDH-218ENST00000641491 SYS1-DBNDD2H3BUS1 97 aa8.69□□□□□ -1.02
PHGDH-218ENST00000641491 DPM2O94777 84 aa8.69□□□□□ -1.02
PHGDH-218ENST00000641491 HERVK_113P61574 105 aa8.69□□□□□ -1.02
PHGDH-218ENST00000641491 TMEM170BQ5T4T1 132 aa8.69□□□□□ -1.02
PHGDH-218ENST00000641491 LINC00173Q6ZV60 143 aa8.69□□□□□ -1.02
PHGDH-218ENST00000641491 A0A0J9YXV3 536 aa8.68□□□□□ -1.02
PHGDH-218ENST00000641491 PRSS2P07478 247 aa8.68□□□□□ -1.02
PHGDH-218ENST00000641491 IGKCP01834 107 aa8.67□□□□□ -1.02
PHGDH-218ENST00000641491 C3orf79P0CE67 100 aa8.67□□□□□ -1.02
PHGDH-218ENST00000641491 IGLC3P0DOY3 106 aa8.67□□□□□ -1.02
PHGDH-218ENST00000641491 LINC00242Q5T6M2 205 aa8.67□□□□□ -1.02
PHGDH-218ENST00000641491 C5orf38Q86SI9 138 aa8.67□□□□□ -1.02
PHGDH-218ENST00000641491 MRPL35Q9NZE8 188 aaKnown RBP8.67□□□□□ -1.02
PHGDH-218ENST00000641491 IGHV1-58A0A0C4DH39 117 aa8.66□□□□□ -1.02
PHGDH-218ENST00000641491 HSBP1L1C9JCN9 74 aa8.66□□□□□ -1.02
PHGDH-218ENST00000641491 ZNF561-AS1K7EIQ3 104 aa8.66□□□□□ -1.02
PHGDH-218ENST00000641491 SCGB1D1O95968 90 aa8.66□□□□□ -1.02
PHGDH-218ENST00000641491 OR10D4PQ8NGN7 298 aa8.66□□□□□ -1.02
PHGDH-218ENST00000641491 FOXI1Q12951 378 aa8.65□□□□□ -1.02
PHGDH-218ENST00000641491 ODF1Q14990 250 aa8.65□□□□□ -1.02
PHGDH-218ENST00000641491 LINC00336Q6ZUF6 198 aa8.64□□□□□ -1.03
PHGDH-218ENST00000641491 FAM19A3Q7Z5A8 133 aa8.64□□□□□ -1.03
PHGDH-218ENST00000641491 SPATA12Q7Z6I5 190 aa8.64□□□□□ -1.03
PHGDH-218ENST00000641491 ORAOV1Q8WV07 137 aa8.64□□□□□ -1.03
PHGDH-218ENST00000641491 FAM104AQ969W3 186 aa8.64□□□□□ -1.03
PHGDH-218ENST00000641491 PMCHL2Q9BQD1 86 aa8.64□□□□□ -1.03
PHGDH-218ENST00000641491 TOMM7Q9P0U1 55 aa8.64□□□□□ -1.03
PHGDH-218ENST00000641491 A0A087WZ39 114 aa8.63□□□□□ -1.03
PHGDH-218ENST00000641491 hDV102S1A0JD36 115 aa8.63□□□□□ -1.03
PHGDH-218ENST00000641491 USP17L23D6RBM5 183 aa8.63□□□□□ -1.03
PHGDH-218ENST00000641491 LECT2O14960 151 aa8.63□□□□□ -1.03
PHGDH-218ENST00000641491 LINC01561Q8N1V8 128 aa8.63□□□□□ -1.03
PHGDH-218ENST00000641491 CDKN2A-AS1Q9UH64 79 aa8.63□□□□□ -1.03
PHGDH-218ENST00000641491 IGLV4-69A0A075B6H9 119 aa8.62□□□□□ -1.03
PHGDH-218ENST00000641491 C11orf86A6NJI1 115 aa8.62□□□□□ -1.03
PHGDH-218ENST00000641491 SPINK8P0C7L1 97 aa8.62□□□□□ -1.03
PHGDH-218ENST00000641491 CKS1BP61024 79 aa8.62□□□□□ -1.03
PHGDH-218ENST00000641491 SPAG11BQ08648 103 aa8.62□□□□□ -1.03
PHGDH-218ENST00000641491 LINC01545Q5VT33 79 aa8.62□□□□□ -1.03
PHGDH-218ENST00000641491 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-218ENST00000641491 IGHV3OR16-9A0A0B4J2B5 98 aa8.61□□□□□ -1.03
PHGDH-218ENST00000641491 ZNF22P17026 224 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-218ENST00000641491 COX6A2Q02221 97 aa8.61□□□□□ -1.03
PHGDH-218ENST00000641491 HIGD2BQ4VC39 106 aa8.61□□□□□ -1.03
PHGDH-218ENST00000641491 IGHV3-64A0A075B6Q5 118 aa8.6□□□□□ -1.03
PHGDH-218ENST00000641491 C6orf226Q5I0X4 101 aa8.6□□□□□ -1.03
PHGDH-218ENST00000641491 KMT2AQ03164 3969 aa8.6□□□□□ -1.03
PHGDH-218ENST00000641491 IGLV5-45A0A087WSX0 123 aa8.59□□□□□ -1.03
PHGDH-218ENST00000641491 CXCL5P42830 114 aa8.59□□□□□ -1.03
PHGDH-218ENST00000641491 CAMK2N2Q96S95 79 aa8.59□□□□□ -1.03
PHGDH-218ENST00000641491 PKIGQ9Y2B9 76 aa8.59□□□□□ -1.03
PHGDH-218ENST00000641491 KIAA1109Q2LD37 5005 aa8.58□□□□□ -1.04
PHGDH-218ENST00000641491 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-218ENST00000641491 A0A087WTM6 91 aa8.58□□□□□ -1.04
PHGDH-218ENST00000641491 NDUFA1O15239 70 aa8.58□□□□□ -1.04
PHGDH-218ENST00000641491 LGALS3P17931 250 aaKnown RBP8.58□□□□□ -1.04
PHGDH-218ENST00000641491 SFTA2Q6UW10 78 aa8.58□□□□□ -1.04
PHGDH-218ENST00000641491 Q6ZRN7 208 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-218ENST00000641491 COX7B2Q8TF08 81 aa8.58□□□□□ -1.04
PHGDH-218ENST00000641491 PLEKHB2Q96CS7 222 aa8.58□□□□□ -1.04
PHGDH-218ENST00000641491 HECTD4Q9Y4D8 3996 aa8.57□□□□□ -1.04
PHGDH-218ENST00000641491 VPS13DQ5THJ4 4388 aa8.57□□□□□ -1.04
PHGDH-218ENST00000641491 SMIM1B2RUZ4 78 aa8.57□□□□□ -1.04
PHGDH-218ENST00000641491 F8WDY8 70 aa8.57□□□□□ -1.04
PHGDH-218ENST00000641491 Q8IZM0 81 aa8.57□□□□□ -1.04
PHGDH-218ENST00000641491 ATOH7Q8N100 152 aa8.57□□□□□ -1.04
PHGDH-218ENST00000641491 Q8N814 137 aa8.57□□□□□ -1.04
PHGDH-218ENST00000641491 GVQW2A0A096LPI5 108 aaPredicted RBP8.56□□□□□ -1.04
PHGDH-218ENST00000641491 TMEM223A0PJW6 202 aa8.56□□□□□ -1.04
PHGDH-218ENST00000641491 RTL8CO15255 209 aa8.56□□□□□ -1.04
PHGDH-218ENST00000641491 KRTAP26-1Q6PEX3 210 aa8.56□□□□□ -1.04
PHGDH-218ENST00000641491 NTN5Q8WTR8 489 aaPredicted RBP8.56□□□□□ -1.04
PHGDH-218ENST00000641491 IGLV5-52A0A0A0MRZ9 124 aa8.55□□□□□ -1.04
PHGDH-218ENST00000641491 S100A12P80511 92 aa8.55□□□□□ -1.04
PHGDH-218ENST00000641491 TNP2Q05952 138 aa8.55□□□□□ -1.04
PHGDH-218ENST00000641491 C15orf56Q8N910 161 aa8.55□□□□□ -1.04
PHGDH-218ENST00000641491 C2orf48Q96LS8 159 aa8.55□□□□□ -1.04
PHGDH-218ENST00000641491 CARD19Q96LW7 228 aa8.55□□□□□ -1.04
PHGDH-218ENST00000641491 LEPROTO15243 131 aa8.54□□□□□ -1.04
PHGDH-218ENST00000641491 NMUP48645 174 aa8.54□□□□□ -1.04
PHGDH-218ENST00000641491 VAMP8Q9BV40 100 aa8.54□□□□□ -1.04
PHGDH-218ENST00000641491 DNAH6Q9C0G6 4158 aa8.53□□□□□ -1.04
PHGDH-218ENST00000641491 MYMXA0A1B0GTQ4 84 aa8.53□□□□□ -1.04
PHGDH-218ENST00000641491 LRCOL1A6NCL2 159 aa8.53□□□□□ -1.04
PHGDH-218ENST00000641491 SYCNQ0VAF6 134 aa8.53□□□□□ -1.04
PHGDH-218ENST00000641491 JOSD1Q15040 202 aaPredicted RBP8.53□□□□□ -1.04
PHGDH-218ENST00000641491 MAPKAPK5-AS1Q8N8E1 139 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms