RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 A0A1B0GXF2 115 aa8.64□□□□□ -1.03
LINC00339-211ENST00000641009 NPYP01303 97 aa8.64□□□□□ -1.03
LINC00339-211ENST00000641009 LINC01600Q96MT4 127 aa8.64□□□□□ -1.03
LINC00339-211ENST00000641009 OPRPNQ99935 248 aaPredicted RBP8.64□□□□□ -1.03
LINC00339-211ENST00000641009 SMDT1Q9H4I9 107 aa8.64□□□□□ -1.03
LINC00339-211ENST00000641009 CARHSP1Q9Y2V2 147 aaKnown RBP8.64□□□□□ -1.03
LINC00339-211ENST00000641009 A0A1W2PNN7 141 aa8.64□□□□□ -1.03
LINC00339-211ENST00000641009 F8W036 122 aa8.64□□□□□ -1.03
LINC00339-211ENST00000641009 TCAPO15273 167 aa8.64□□□□□ -1.03
LINC00339-211ENST00000641009 APOMO95445 188 aa8.64□□□□□ -1.03
LINC00339-211ENST00000641009 SPAG11BQ08648 103 aa8.64□□□□□ -1.03
LINC00339-211ENST00000641009 A0A0J9YXV3 536 aa8.63□□□□□ -1.03
LINC00339-211ENST00000641009 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.63□□□□□ -1.03
LINC00339-211ENST00000641009 APOC3P02656 99 aa8.63□□□□□ -1.03
LINC00339-211ENST00000641009 S100A8P05109 93 aa8.63□□□□□ -1.03
LINC00339-211ENST00000641009 ODF1Q14990 250 aa8.63□□□□□ -1.03
LINC00339-211ENST00000641009 Q6ZRP5 223 aa8.63□□□□□ -1.03
LINC00339-211ENST00000641009 C2orf48Q96LS8 159 aa8.63□□□□□ -1.03
LINC00339-211ENST00000641009 SEC11CQ9BY50 192 aa8.63□□□□□ -1.03
LINC00339-211ENST00000641009 RPL18AQ02543 176 aaKnown RBP8.62□□□□□ -1.03
LINC00339-211ENST00000641009 SPINK6Q6UWN8 80 aa8.62□□□□□ -1.03
LINC00339-211ENST00000641009 SPANXA1Q9NS26 97 aa8.62□□□□□ -1.03
LINC00339-211ENST00000641009 LRP2P98164 4655 aa8.62□□□□□ -1.03
LINC00339-211ENST00000641009 ADCYAP1P18509 176 aa8.61□□□□□ -1.03
LINC00339-211ENST00000641009 SVBPQ8N300 66 aa8.61□□□□□ -1.03
LINC00339-211ENST00000641009 IGHV3OR16-9A0A0B4J2B5 98 aa8.6□□□□□ -1.03
LINC00339-211ENST00000641009 IFITM10A6NMD0 228 aa8.6□□□□□ -1.03
LINC00339-211ENST00000641009 PPBPP02775 128 aa8.6□□□□□ -1.03
LINC00339-211ENST00000641009 MRPS36P82909 103 aaKnown RBP8.6□□□□□ -1.03
LINC00339-211ENST00000641009 SRSF9Q13242 221 aaKnown RBP eCLIP8.6□□□□□ -1.03
LINC00339-211ENST00000641009 C9orf116Q5BN46 136 aaPredicted RBP8.6□□□□□ -1.03
LINC00339-211ENST00000641009 OR10D4PQ8NGN7 298 aa8.6□□□□□ -1.03
LINC00339-211ENST00000641009 SVIPQ8NHG7 77 aa8.6□□□□□ -1.03
LINC00339-211ENST00000641009 ORAOV1Q8WV07 137 aa8.6□□□□□ -1.03
LINC00339-211ENST00000641009 REG3GQ6UW15 175 aa8.59□□□□□ -1.03
LINC00339-211ENST00000641009 ORMDL3Q8N138 153 aa8.59□□□□□ -1.03
LINC00339-211ENST00000641009 RNF151Q2KHN1 245 aa8.58□□□□□ -1.04
LINC00339-211ENST00000641009 TMEM136Q6ZRR5 245 aa8.58□□□□□ -1.04
LINC00339-211ENST00000641009 ATP5L2Q7Z4Y8 100 aa8.58□□□□□ -1.04
LINC00339-211ENST00000641009 PRELID3AQ96N28 172 aa8.58□□□□□ -1.04
LINC00339-211ENST00000641009 RAB5AP20339 215 aa8.57□□□□□ -1.04
LINC00339-211ENST00000641009 C10orf25Q5T742 122 aa8.57□□□□□ -1.04
LINC00339-211ENST00000641009 PHF5AQ7RTV0 110 aaKnown RBP8.57□□□□□ -1.04
LINC00339-211ENST00000641009 MRPL35Q9NZE8 188 aaKnown RBP8.57□□□□□ -1.04
LINC00339-211ENST00000641009 PSORS1C2Q9UIG4 136 aa8.57□□□□□ -1.04
LINC00339-211ENST00000641009 SNAPINO95295 136 aa8.57□□□□□ -1.04
LINC00339-211ENST00000641009 IFI27P40305 119 aaPredicted RBP8.57□□□□□ -1.04
LINC00339-211ENST00000641009 KRTAP10-8P60410 259 aa8.57□□□□□ -1.04
LINC00339-211ENST00000641009 IGLV4-3A0A075B6K6 122 aa8.56□□□□□ -1.04
LINC00339-211ENST00000641009 LOC389332A0A1B0GUA5 103 aa8.56□□□□□ -1.04
LINC00339-211ENST00000641009 NDUFA1O15239 70 aa8.56□□□□□ -1.04
LINC00339-211ENST00000641009 UNQ6190/PRO20217Q6UXQ8 127 aa8.56□□□□□ -1.04
LINC00339-211ENST00000641009 TGIF2-C20orf24A0A0A6YYL0 155 aa8.55□□□□□ -1.04
LINC00339-211ENST00000641009 MT-ND6P03923 174 aa8.55□□□□□ -1.04
LINC00339-211ENST00000641009 C6orf48Q9UBA6 75 aa8.55□□□□□ -1.04
LINC00339-211ENST00000641009 PYGO1Q9Y3Y4 419 aa8.55□□□□□ -1.04
LINC00339-211ENST00000641009 FAM168BA1KXE4 195 aa8.54□□□□□ -1.04
LINC00339-211ENST00000641009 F8WDY8 70 aa8.54□□□□□ -1.04
LINC00339-211ENST00000641009 LINC00242Q5T6M2 205 aa8.54□□□□□ -1.04
LINC00339-211ENST00000641009 IMMP2LQ96T52 175 aa8.54□□□□□ -1.04
LINC00339-211ENST00000641009 A0A087WZ39 114 aa8.53□□□□□ -1.04
LINC00339-211ENST00000641009 PRSS47A8MTI9 375 aa8.53□□□□□ -1.04
LINC00339-211ENST00000641009 KIAA0087Q14695 138 aa8.53□□□□□ -1.04
LINC00339-211ENST00000641009 C1orf137Q5JT78 98 aa8.53□□□□□ -1.04
LINC00339-211ENST00000641009 TMEM141Q96I45 108 aa8.53□□□□□ -1.04
LINC00339-211ENST00000641009 MAP1LC3AQ9H492 121 aa8.53□□□□□ -1.04
LINC00339-211ENST00000641009 TLX1NBP0CAT3 122 aa8.52□□□□□ -1.05
LINC00339-211ENST00000641009 PNRC1Q12796 327 aaPredicted RBP8.52□□□□□ -1.05
LINC00339-211ENST00000641009 ZC2HC1BQ5TFG8 222 aa8.52□□□□□ -1.05
LINC00339-211ENST00000641009 LAMTOR2Q9Y2Q5 125 aa8.52□□□□□ -1.05
LINC00339-211ENST00000641009 MT-ND4LP03901 98 aa8.51□□□□□ -1.05
LINC00339-211ENST00000641009 GAGE2EQ4V326 116 aa8.51□□□□□ -1.05
LINC00339-211ENST00000641009 TEX43Q6ZNM6 134 aa8.51□□□□□ -1.05
LINC00339-211ENST00000641009 FAM19A5Q7Z5A7 132 aaPredicted RBP8.51□□□□□ -1.05
LINC00339-211ENST00000641009 GAGE2DQ9UEU5 116 aa8.51□□□□□ -1.05
LINC00339-211ENST00000641009 UBE2D1P51668 147 aa8.51□□□□□ -1.05
LINC00339-211ENST00000641009 C2orf82Q6UX34 121 aa8.51□□□□□ -1.05
LINC00339-211ENST00000641009 KRTAP11-1Q8IUC1 163 aa8.51□□□□□ -1.05
LINC00339-211ENST00000641009 Q8N8P6 123 aa8.51□□□□□ -1.05
LINC00339-211ENST00000641009 ANAPC16Q96DE5 110 aa8.51□□□□□ -1.05
LINC00339-211ENST00000641009 RNF213Q63HN8 5207 aa8.5□□□□□ -1.05
LINC00339-211ENST00000641009 C2orf66Q6UXQ4 117 aa8.5□□□□□ -1.05
LINC00339-211ENST00000641009 LINC00173Q6ZV60 143 aa8.5□□□□□ -1.05
LINC00339-211ENST00000641009 C2orf88Q9BSF0 95 aa8.5□□□□□ -1.05
LINC00339-211ENST00000641009 CYSLTR1Q9Y271 337 aa8.5□□□□□ -1.05
LINC00339-211ENST00000641009 COLCA2A8K830 154 aa8.49□□□□□ -1.05
LINC00339-211ENST00000641009 KRTAP7-1Q8IUC3 87 aa8.49□□□□□ -1.05
LINC00339-211ENST00000641009 SMCO4Q9NRQ5 59 aa8.49□□□□□ -1.05
LINC00339-211ENST00000641009 IGLV7-43P04211 117 aa8.48□□□□□ -1.05
LINC00339-211ENST00000641009 Q6ZN92 141 aa8.48□□□□□ -1.05
LINC00339-211ENST00000641009 CBLN2Q8IUK8 224 aa8.48□□□□□ -1.05
LINC00339-211ENST00000641009 AMELXQ99217 191 aa8.48□□□□□ -1.05
LINC00339-211ENST00000641009 TRBV30A0A0K0K1B3 111 aa8.47□□□□□ -1.05
LINC00339-211ENST00000641009 ORMDL2Q53FV1 153 aa8.47□□□□□ -1.05
LINC00339-211ENST00000641009 VCX2Q9H322 139 aa8.47□□□□□ -1.05
LINC00339-211ENST00000641009 IGIPA6NJ69 53 aa8.46□□□□□ -1.05
LINC00339-211ENST00000641009 NDUFC2-KCTD14E9PQ53 114 aa8.46□□□□□ -1.05
LINC00339-211ENST00000641009 M0QXV9 152 aa8.46□□□□□ -1.05
LINC00339-211ENST00000641009 RHEBQ15382 184 aa8.46□□□□□ -1.05
LINC00339-211ENST00000641009 LINC01561Q8N1V8 128 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms