RNA–Protein interactions for RNA: ENST00000639603.1

STRADA-238, Transcript of STE20-related kinase adaptor alpha, human

TSL 5

Gene STRADA, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-238	ENST00000639603	NUPR1	O60356	82 aa		4.42	□□□□□ -1.7
STRADA-238	ENST00000639603	CRYGA	P11844	174 aa		4.42	□□□□□ -1.7
STRADA-238	ENST00000639603	LINC01547	P58512	204 aa	Predicted RBP	4.42	□□□□□ -1.7
STRADA-238	ENST00000639603	CTAG1A	P78358	180 aa		4.42	□□□□□ -1.7
STRADA-238	ENST00000639603	CCL20	P78556	96 aa		4.42	□□□□□ -1.7
STRADA-238	ENST00000639603	FAM213B	Q8TBF2	198 aa		4.42	□□□□□ -1.7
STRADA-238	ENST00000639603	KRTAP4-11	Q9BYQ6	195 aa		4.42	□□□□□ -1.7
STRADA-238	ENST00000639603	SMDT1	Q9H4I9	107 aa		4.42	□□□□□ -1.7
STRADA-238	ENST00000639603	ST20	Q9HBF5	79 aa		4.42	□□□□□ -1.7
STRADA-238	ENST00000639603	TMEM242	Q9NWH2	141 aa		4.42	□□□□□ -1.7
STRADA-238	ENST00000639603		Q5BKY6	102 aa		4.41	□□□□□ -1.7
STRADA-238	ENST00000639603	C5orf38	Q86SI9	138 aa		4.41	□□□□□ -1.7
STRADA-238	ENST00000639603	ORAOV1	Q8WV07	137 aa		4.41	□□□□□ -1.7
STRADA-238	ENST00000639603		A0A087X002	238 aa		4.4	□□□□□ -1.71
STRADA-238	ENST00000639603	TRAV13-1	A0A0B4J241	112 aa		4.4	□□□□□ -1.71
STRADA-238	ENST00000639603	TRBV27	A0A0K0K1C4	114 aa		4.4	□□□□□ -1.71
STRADA-238	ENST00000639603	GAGE2E	Q4V326	116 aa		4.4	□□□□□ -1.71
STRADA-238	ENST00000639603	CYTL1	Q9NRR1	136 aa		4.4	□□□□□ -1.71
STRADA-238	ENST00000639603	GAGE2D	Q9UEU5	116 aa		4.4	□□□□□ -1.71
STRADA-238	ENST00000639603	UBE2D4	Q9Y2X8	147 aa		4.4	□□□□□ -1.71
STRADA-238	ENST00000639603	IGLV7-46	A0A075B6I9	117 aa		4.39	□□□□□ -1.71
STRADA-238	ENST00000639603	TRBV30	A0A0K0K1B3	111 aa		4.39	□□□□□ -1.71
STRADA-238	ENST00000639603	RAB19	A4D1S5	217 aa		4.39	□□□□□ -1.71
STRADA-238	ENST00000639603	NDUFC2-KCTD14	E9PQ53	114 aa		4.39	□□□□□ -1.71
STRADA-238	ENST00000639603	PDE6D	O43924	150 aa		4.39	□□□□□ -1.71
STRADA-238	ENST00000639603	FCER1G	P30273	86 aa		4.39	□□□□□ -1.71
STRADA-238	ENST00000639603	RPL28	P46779	137 aa	Known RBP	4.39	□□□□□ -1.71
STRADA-238	ENST00000639603	POLR2K	P53803	58 aa	Known RBP	4.39	□□□□□ -1.71
STRADA-238	ENST00000639603	LINC00173	Q6ZV60	143 aa		4.39	□□□□□ -1.71
STRADA-238	ENST00000639603	KRTAP7-1	Q8IUC3	87 aa		4.39	□□□□□ -1.71
STRADA-238	ENST00000639603	TMEM18	Q96B42	140 aa		4.39	□□□□□ -1.71
STRADA-238	ENST00000639603	RETNLB	Q9BQ08	111 aa		4.39	□□□□□ -1.71
STRADA-238	ENST00000639603	TIMM21	Q9BVV7	248 aa		4.39	□□□□□ -1.71
STRADA-238	ENST00000639603	RNASE7	Q9H1E1	156 aa	Known RBP	4.39	□□□□□ -1.71
STRADA-238	ENST00000639603	GNG13	Q9P2W3	67 aa		4.39	□□□□□ -1.71
STRADA-238	ENST00000639603	C6orf48	Q9UBA6	75 aa		4.39	□□□□□ -1.71
STRADA-238	ENST00000639603	TRBV20OR9-2	A0A075B6H5	130 aa		4.38	□□□□□ -1.71
STRADA-238	ENST00000639603	TEX46	H3BTG2	121 aa		4.38	□□□□□ -1.71
STRADA-238	ENST00000639603	ARPC5	O15511	151 aa		4.38	□□□□□ -1.71
STRADA-238	ENST00000639603	RNASE13	Q5GAN3	156 aa	Known RBP	4.38	□□□□□ -1.71
STRADA-238	ENST00000639603		Q6ZUT4	128 aa		4.38	□□□□□ -1.71
STRADA-238	ENST00000639603	LINC00304	Q8N9R0	145 aa		4.38	□□□□□ -1.71
STRADA-238	ENST00000639603	BORCS7	Q96B45	105 aa		4.38	□□□□□ -1.71
STRADA-238	ENST00000639603	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.37	□□□□□ -1.71
STRADA-238	ENST00000639603	VCY	O14598	125 aa		4.37	□□□□□ -1.71
STRADA-238	ENST00000639603	PPP1R17	O96001	155 aa		4.37	□□□□□ -1.71
STRADA-238	ENST00000639603	FOXA3	P55318	350 aa	Predicted RBP	4.37	□□□□□ -1.71
STRADA-238	ENST00000639603	ZNF345	Q14585	488 aa		4.37	□□□□□ -1.71
STRADA-238	ENST00000639603	LBH	Q53QV2	105 aa	Predicted RBP	4.37	□□□□□ -1.71
STRADA-238	ENST00000639603	C10orf25	Q5T742	122 aa		4.37	□□□□□ -1.71
STRADA-238	ENST00000639603	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.37	□□□□□ -1.71
STRADA-238	ENST00000639603	KIR2DL4	Q99706	377 aa		4.37	□□□□□ -1.71
STRADA-238	ENST00000639603	TCAP	O15273	167 aa		4.36	□□□□□ -1.71
STRADA-238	ENST00000639603	BCE1	O60756	84 aa		4.36	□□□□□ -1.71
STRADA-238	ENST00000639603	FAM229B	Q4G0N7	80 aa		4.36	□□□□□ -1.71
STRADA-238	ENST00000639603	C9orf129	Q5T035	196 aa	Known RBP	4.36	□□□□□ -1.71
STRADA-238	ENST00000639603	PACRG	Q96M98	296 aa	Predicted RBP	4.36	□□□□□ -1.71
STRADA-238	ENST00000639603	KRTAP4-2	Q9BYR5	136 aa		4.36	□□□□□ -1.71
STRADA-238	ENST00000639603	CTDSP1	Q9GZU7	261 aa		4.36	□□□□□ -1.71
STRADA-238	ENST00000639603	TMEM191A	Q9H0A3	160 aa		4.36	□□□□□ -1.71
STRADA-238	ENST00000639603	MED9	Q9NWA0	146 aa		4.36	□□□□□ -1.71
STRADA-238	ENST00000639603	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.35	□□□□□ -1.71
STRADA-238	ENST00000639603		A8MWL6	223 aa		4.35	□□□□□ -1.71
STRADA-238	ENST00000639603	PPP1R2P9	O14990	202 aa		4.35	□□□□□ -1.71
STRADA-238	ENST00000639603	PPDPF	Q9H3Y8	114 aa		4.35	□□□□□ -1.71
STRADA-238	ENST00000639603	TP73-AS1	Q9UF72	201 aa		4.35	□□□□□ -1.71
STRADA-238	ENST00000639603	GATC	O43716	136 aa	Known RBP	4.34	□□□□□ -1.71
STRADA-238	ENST00000639603	TAGLN2	P37802	199 aa	Known RBP	4.34	□□□□□ -1.71
STRADA-238	ENST00000639603	SUMO2	P61956	95 aa	Known RBP	4.34	□□□□□ -1.71
STRADA-238	ENST00000639603	HBB	P68871	147 aa		4.34	□□□□□ -1.71
STRADA-238	ENST00000639603	MRPS36	P82909	103 aa	Known RBP	4.34	□□□□□ -1.71
STRADA-238	ENST00000639603	ASB16-AS1	Q495Z4	193 aa		4.34	□□□□□ -1.71
STRADA-238	ENST00000639603	KRTAP13-2	Q52LG2	175 aa		4.34	□□□□□ -1.71
STRADA-238	ENST00000639603	FP248	Q71RG6	208 aa	Predicted RBP	4.34	□□□□□ -1.71
STRADA-238	ENST00000639603	SPANXA1	Q9NS26	97 aa		4.34	□□□□□ -1.71
STRADA-238	ENST00000639603	C22orf24	Q9Y442	160 aa		4.34	□□□□□ -1.71
STRADA-238	ENST00000639603	FSIP2	Q5CZC0	6907 aa		4.33	□□□□□ -1.72
STRADA-238	ENST00000639603	IGKV2D-26	A0A0A0MRZ7	120 aa		4.33	□□□□□ -1.72
STRADA-238	ENST00000639603		A0A1B0GUT8	65 aa		4.33	□□□□□ -1.72
STRADA-238	ENST00000639603	KANTR	A0A1W2PQU2	76 aa		4.33	□□□□□ -1.72
STRADA-238	ENST00000639603	IFITM10	A6NMD0	228 aa		4.33	□□□□□ -1.72
STRADA-238	ENST00000639603		K7EN84	100 aa		4.33	□□□□□ -1.72
STRADA-238	ENST00000639603	RAB4A	P20338	218 aa		4.33	□□□□□ -1.72
STRADA-238	ENST00000639603	KIAA0087	Q14695	138 aa		4.33	□□□□□ -1.72
STRADA-238	ENST00000639603	LINC00242	Q5T6M2	205 aa		4.33	□□□□□ -1.72
STRADA-238	ENST00000639603	FAM231D	Q6ZW35	169 aa		4.33	□□□□□ -1.72
STRADA-238	ENST00000639603	LINC00337	Q8N6G1	96 aa		4.33	□□□□□ -1.72
STRADA-238	ENST00000639603	SVIP	Q8NHG7	77 aa		4.33	□□□□□ -1.72
STRADA-238	ENST00000639603	SEC61B	P60468	96 aa	Known RBP	4.32	□□□□□ -1.72
STRADA-238	ENST00000639603	MRPL55	Q7Z7F7	128 aa	Known RBP	4.32	□□□□□ -1.72
STRADA-238	ENST00000639603	AMN1	Q8IY45	258 aa		4.32	□□□□□ -1.72
STRADA-238	ENST00000639603	LINC01561	Q8N1V8	128 aa		4.32	□□□□□ -1.72
STRADA-238	ENST00000639603	OCC1	Q8TAD7	63 aa		4.32	□□□□□ -1.72
STRADA-238	ENST00000639603	HMSD	A8MTL9	139 aa		4.31	□□□□□ -1.72
STRADA-238	ENST00000639603	ZNF727	A8MUV8	499 aa		4.31	□□□□□ -1.72
STRADA-238	ENST00000639603	HIGD1C	A8MV81	97 aa		4.31	□□□□□ -1.72
STRADA-238	ENST00000639603	RPL32	P62910	135 aa	Known RBP	4.31	□□□□□ -1.72
STRADA-238	ENST00000639603	KRTAP15-1	Q3LI76	137 aa		4.31	□□□□□ -1.72
STRADA-238	ENST00000639603	C2orf82	Q6UX34	121 aa		4.31	□□□□□ -1.72
STRADA-238	ENST00000639603	NRAC	Q8N912	160 aa		4.31	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms