RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 BAHCC1Q9P281 2608 aa3.07□□□□□ -1.92
SCN3A-209ENST00000639244 IGHV7-81A0A0B4J1V7 117 aa3.07□□□□□ -1.92
SCN3A-209ENST00000639244 H3BQ85 93 aa3.07□□□□□ -1.92
SCN3A-209ENST00000639244 C10orf55Q5SWW7 151 aa3.07□□□□□ -1.92
SCN3A-209ENST00000639244 Q8N814 137 aa3.07□□□□□ -1.92
SCN3A-209ENST00000639244 LOC101927531A0A1B0GV80 90 aa3.07□□□□□ -1.92
SCN3A-209ENST00000639244 ADAMTSL4-AS1Q5T5F5 129 aa3.07□□□□□ -1.92
SCN3A-209ENST00000639244 Q8TAT8 98 aa3.07□□□□□ -1.92
SCN3A-209ENST00000639244 IGHV3-30-3P0DP02 117 aa3.07□□□□□ -1.92
SCN3A-209ENST00000639244 ZNRD1Q9P1U0 126 aa3.07□□□□□ -1.92
SCN3A-209ENST00000639244 IGHV3-53P01767 116 aa3.07□□□□□ -1.92
SCN3A-209ENST00000639244 GNLYP22749 145 aa3.07□□□□□ -1.92
SCN3A-209ENST00000639244 Q6ZS46 218 aa3.07□□□□□ -1.92
SCN3A-209ENST00000639244 LYPD1Q8N2G4 141 aa3.07□□□□□ -1.92
SCN3A-209ENST00000639244 CRIP3Q6Q6R5 217 aa3.06□□□□□ -1.92
SCN3A-209ENST00000639244 IGHV1-8P0DP01 117 aa3.06□□□□□ -1.92
SCN3A-209ENST00000639244 UTRNP46939 3433 aa3.06□□□□□ -1.92
SCN3A-209ENST00000639244 MAP1AP78559 2803 aaPredicted RBP3.06□□□□□ -1.92
SCN3A-209ENST00000639244 TRGV2A0A075B6R0 118 aa3.06□□□□□ -1.92
SCN3A-209ENST00000639244 P0C879 139 aa3.06□□□□□ -1.92
SCN3A-209ENST00000639244 LINC00208Q96KT6 92 aa3.06□□□□□ -1.92
SCN3A-209ENST00000639244 IGLV3-21P80748 117 aaPredicted RBP3.06□□□□□ -1.92
SCN3A-209ENST00000639244 APCP25054 2843 aa3.06□□□□□ -1.92
SCN3A-209ENST00000639244 K7EQD1 137 aa3.06□□□□□ -1.92
SCN3A-209ENST00000639244 LY6HO94772 140 aa3.06□□□□□ -1.92
SCN3A-209ENST00000639244 C22orf34Q6ZV56 151 aa3.06□□□□□ -1.92
SCN3A-209ENST00000639244 IGKV1-39P01597 117 aa3.06□□□□□ -1.92
SCN3A-209ENST00000639244 IGKV1D-39P04432 117 aa3.06□□□□□ -1.92
SCN3A-209ENST00000639244 C1orf134Q5TEV5 83 aa3.06□□□□□ -1.92
SCN3A-209ENST00000639244 LRBAP50851 2863 aa3.05□□□□□ -1.92
SCN3A-209ENST00000639244 CFAP46Q8IYW2 2715 aa3.05□□□□□ -1.92
SCN3A-209ENST00000639244 PRB2P02812 416 aaPredicted RBP3.05□□□□□ -1.92
SCN3A-209ENST00000639244 ELOF1P60002 83 aaKnown RBP3.05□□□□□ -1.92
SCN3A-209ENST00000639244 CEP295Q9C0D2 2601 aa3.05□□□□□ -1.92
SCN3A-209ENST00000639244 PCNTO95613 3336 aa3.05□□□□□ -1.92
SCN3A-209ENST00000639244 K7EQG2 157 aa3.05□□□□□ -1.92
SCN3A-209ENST00000639244 LINC01547P58512 204 aaPredicted RBP3.05□□□□□ -1.92
SCN3A-209ENST00000639244 PINLYPA6NC86 204 aa3.05□□□□□ -1.92
SCN3A-209ENST00000639244 CHTF8P0CG12 524 aa3.05□□□□□ -1.92
SCN3A-209ENST00000639244 RNASE13Q5GAN3 156 aaKnown RBP3.05□□□□□ -1.92
SCN3A-209ENST00000639244 ZNF833PQ6ZTB9 187 aa3.05□□□□□ -1.92
SCN3A-209ENST00000639244 C18orf65Q6ZTR6 163 aa3.05□□□□□ -1.92
SCN3A-209ENST00000639244 Q8N7P7 452 aa3.05□□□□□ -1.92
SCN3A-209ENST00000639244 IGLV5-45A0A087WSX0 123 aa3.05□□□□□ -1.92
SCN3A-209ENST00000639244 IGHV1-69P01742 117 aa3.05□□□□□ -1.92
SCN3A-209ENST00000639244 LINC00574Q9H8X3 128 aa3.05□□□□□ -1.92
SCN3A-209ENST00000639244 SND1-IT1Q9HBX3 110 aa3.05□□□□□ -1.92
SCN3A-209ENST00000639244 DMBT1Q9UGM3 2413 aaPredicted RBP3.05□□□□□ -1.92
SCN3A-209ENST00000639244 MSMBP08118 114 aa3.04□□□□□ -1.92
SCN3A-209ENST00000639244 LINC00271P0C7V0 271 aa3.04□□□□□ -1.92
SCN3A-209ENST00000639244 C20orf203Q8NBC4 194 aa3.04□□□□□ -1.92
SCN3A-209ENST00000639244 OBSCN-AS1Q96MR7 158 aa3.04□□□□□ -1.92
SCN3A-209ENST00000639244 DPM3Q9P2X0 92 aa3.04□□□□□ -1.92
SCN3A-209ENST00000639244 TRBV6-5A0A0K0K1A5 114 aa3.04□□□□□ -1.92
SCN3A-209ENST00000639244 IGIPA6NJ69 53 aa3.04□□□□□ -1.92
SCN3A-209ENST00000639244 C9orf106Q8NAJ2 232 aa3.04□□□□□ -1.92
SCN3A-209ENST00000639244 FASNP49327 2511 aaKnown RBP3.04□□□□□ -1.92
SCN3A-209ENST00000639244 IGHV3-16A0A0C4DH30 117 aa3.04□□□□□ -1.92
SCN3A-209ENST00000639244 KIF25-AS1Q9Y6Z4 181 aa3.04□□□□□ -1.92
SCN3A-209ENST00000639244 AKAP13Q12802 2813 aa3.04□□□□□ -1.92
SCN3A-209ENST00000639244 LINC00158P58513 81 aa3.04□□□□□ -1.92
SCN3A-209ENST00000639244 BRD3OSQ6XYD6 125 aa3.04□□□□□ -1.92
SCN3A-209ENST00000639244 C14orf178Q8N769 122 aaPredicted RBP3.04□□□□□ -1.92
SCN3A-209ENST00000639244 MAPK1IP1LQ8NDC0 245 aa3.04□□□□□ -1.92
SCN3A-209ENST00000639244 BBC3Q96PG8 261 aaPredicted RBP3.04□□□□□ -1.92
SCN3A-209ENST00000639244 IGLV2-11P01706 119 aa3.03□□□□□ -1.92
SCN3A-209ENST00000639244 LINC00242Q5T6M2 205 aa3.03□□□□□ -1.92
SCN3A-209ENST00000639244 TMEM105Q8N8V8 129 aa3.03□□□□□ -1.92
SCN3A-209ENST00000639244 CDC42SE2Q9NRR3 84 aa3.03□□□□□ -1.92
SCN3A-209ENST00000639244 RNF223E7ERA6 249 aa3.03□□□□□ -1.92
SCN3A-209ENST00000639244 SPAG11BQ08648 103 aa3.03□□□□□ -1.92
SCN3A-209ENST00000639244 SPAG11AQ6PDA7 123 aa3.03□□□□□ -1.92
SCN3A-209ENST00000639244 LINC00322Q6ZN03 302 aaPredicted RBP3.03□□□□□ -1.92
SCN3A-209ENST00000639244 NDUFA4L2Q9NRX3 87 aa3.03□□□□□ -1.92
SCN3A-209ENST00000639244 NCR3O14931 201 aa3.03□□□□□ -1.92
SCN3A-209ENST00000639244 FSHBP01225 129 aa3.03□□□□□ -1.92
SCN3A-209ENST00000639244 PLA2G2CQ5R387 149 aa3.03□□□□□ -1.92
SCN3A-209ENST00000639244 FAM218AQ96MZ4 157 aa3.03□□□□□ -1.92
SCN3A-209ENST00000639244 IGLV3-9A0A075B6K5 115 aa3.03□□□□□ -1.92
SCN3A-209ENST00000639244 Q6ZTC4 211 aa3.03□□□□□ -1.92
SCN3A-209ENST00000639244 MIR7-3HGQ8N6C7 128 aa3.03□□□□□ -1.93
SCN3A-209ENST00000639244 NBEAQ8NFP9 2946 aa3.02□□□□□ -1.93
SCN3A-209ENST00000639244 IGHV4-61A0A0C4DH41 118 aa3.02□□□□□ -1.93
SCN3A-209ENST00000639244 IGKV1-6A0A0C4DH72 117 aa3.02□□□□□ -1.93
SCN3A-209ENST00000639244 IGHV4-59P01825 116 aa3.02□□□□□ -1.93
SCN3A-209ENST00000639244 AMELXQ99217 191 aa3.02□□□□□ -1.93
SCN3A-209ENST00000639244 NOTCH2Q04721 2471 aa3.02□□□□□ -1.93
SCN3A-209ENST00000639244 TRGV4A0A0C4DH28 118 aa3.02□□□□□ -1.93
SCN3A-209ENST00000639244 MOBPQ13875 183 aa3.02□□□□□ -1.93
SCN3A-209ENST00000639244 TMEM167AQ8TBQ9 72 aa3.02□□□□□ -1.93
SCN3A-209ENST00000639244 B9D2Q9BPU9 175 aa3.02□□□□□ -1.93
SCN3A-209ENST00000639244 IGHV1-18A0A0C4DH31 117 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 TRBV10-1A0A0K0K1A3 114 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 LECT2O14960 151 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 ZNF292O60281 2723 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 CLPSL2Q6UWE3 100 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 CAMK2N2Q96S95 79 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 A0A096LPF7 62 aa3.01□□□□□ -1.93
SCN3A-209ENST00000639244 TRGV1A0A0A0MS02 117 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms