RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 I3L2K1 104 aa0.26□□□□□ -2.37
GYPB-216ENST00000638448 MT-ATP8P03928 68 aa0.26□□□□□ -2.37
GYPB-216ENST00000638448 S100A8P05109 93 aa0.26□□□□□ -2.37
GYPB-216ENST00000638448 LINC00032P0C843 101 aa0.26□□□□□ -2.37
GYPB-216ENST00000638448 TP53AIP1Q9HCN2 124 aa0.26□□□□□ -2.37
GYPB-216ENST00000638448 VPS8Q8N3P4 1428 aa0.26□□□□□ -2.37
GYPB-216ENST00000638448 KIF21AQ7Z4S6 1674 aa0.26□□□□□ -2.37
GYPB-216ENST00000638448 TCHHQ07283 1943 aa0.26□□□□□ -2.37
GYPB-216ENST00000638448 DOPEY2Q9Y3R5 2298 aa0.26□□□□□ -2.37
GYPB-216ENST00000638448 PTPRQQ9UMZ3 2332 aa0.26□□□□□ -2.37
GYPB-216ENST00000638448 SPTBN1Q01082 2364 aaKnown RBP0.26□□□□□ -2.37
GYPB-216ENST00000638448 MUC5BQ9HC84 5762 aaPredicted RBP0.26□□□□□ -2.37
GYPB-216ENST00000638448 UNC79Q9P2D8 2635 aa0.25□□□□□ -2.37
GYPB-216ENST00000638448 KDM3BQ7LBC6 1761 aa0.25□□□□□ -2.37
GYPB-216ENST00000638448 KDM5AP29375 1690 aaKnown RBP0.25□□□□□ -2.37
GYPB-216ENST00000638448 LAMC1P11047 1609 aa0.25□□□□□ -2.37
GYPB-216ENST00000638448 A0A1B0GWA3 101 aa0.25□□□□□ -2.37
GYPB-216ENST00000638448 FAM223BA6NKX1 122 aa0.25□□□□□ -2.37
GYPB-216ENST00000638448 C10orf142B7Z368 130 aa0.25□□□□□ -2.37
GYPB-216ENST00000638448 MPC2O95563 127 aa0.25□□□□□ -2.37
GYPB-216ENST00000638448 Q8IZM0 81 aa0.25□□□□□ -2.37
GYPB-216ENST00000638448 FDCSPQ8NFU4 85 aa0.25□□□□□ -2.37
GYPB-216ENST00000638448 PMCHL2Q9BQD1 86 aa0.25□□□□□ -2.37
GYPB-216ENST00000638448 DPY30Q9C005 99 aa0.25□□□□□ -2.37
GYPB-216ENST00000638448 MYO7BQ6PIF6 2116 aa0.25□□□□□ -2.37
GYPB-216ENST00000638448 CC2D2AQ9P2K1 1620 aa0.24□□□□□ -2.37
GYPB-216ENST00000638448 ARHGEF5Q12774 1597 aa0.24□□□□□ -2.37
GYPB-216ENST00000638448 ERCC6L2Q5T890 1561 aa0.24□□□□□ -2.37
GYPB-216ENST00000638448 PRDM15P57071 1507 aaPredicted RBP0.24□□□□□ -2.37
GYPB-216ENST00000638448 ADGRL2O95490 1459 aa0.24□□□□□ -2.37
GYPB-216ENST00000638448 TEX14Q8IWB6 1497 aa0.24□□□□□ -2.37
GYPB-216ENST00000638448 A0A0G2JND7 137 aa0.24□□□□□ -2.37
GYPB-216ENST00000638448 ATOX1O00244 68 aa0.24□□□□□ -2.37
GYPB-216ENST00000638448 PKIAP61925 76 aa0.24□□□□□ -2.37
GYPB-216ENST00000638448 C10orf113Q5VZT2 155 aa0.24□□□□□ -2.37
GYPB-216ENST00000638448 VAMP8Q9BV40 100 aa0.24□□□□□ -2.37
GYPB-216ENST00000638448 PRO1933Q9H354 126 aa0.24□□□□□ -2.37
GYPB-216ENST00000638448 CACFD1Q9UGQ2 172 aa0.24□□□□□ -2.37
GYPB-216ENST00000638448 ANKRD17O75179 2603 aaKnown RBP0.24□□□□□ -2.37
GYPB-216ENST00000638448 SBF2Q86WG5 1849 aa0.24□□□□□ -2.37
GYPB-216ENST00000638448 WNK3Q9BYP7 1800 aa0.24□□□□□ -2.37
GYPB-216ENST00000638448 URB1O60287 2271 aaKnown RBP0.24□□□□□ -2.37
GYPB-216ENST00000638448 PKDREJQ9NTG1 2253 aa0.24□□□□□ -2.37
GYPB-216ENST00000638448 BIVM-ERCC5R4GMW8 1640 aa0.24□□□□□ -2.37
GYPB-216ENST00000638448 USF3Q68DE3 2245 aa0.23□□□□□ -2.37
GYPB-216ENST00000638448 ANKRD36BQ8N2N9 1353 aa0.23□□□□□ -2.37
GYPB-216ENST00000638448 GVINP1Q7Z2Y8 2422 aa0.23□□□□□ -2.37
GYPB-216ENST00000638448 PLXNB2O15031 1838 aa0.23□□□□□ -2.37
GYPB-216ENST00000638448 C7orf77A4D0Y5 90 aa0.23□□□□□ -2.37
GYPB-216ENST00000638448 FAUP35544 74 aaKnown RBP0.23□□□□□ -2.37
GYPB-216ENST00000638448 WFDC2Q14508 124 aa0.23□□□□□ -2.37
GYPB-216ENST00000638448 PMCHL1Q16048 86 aa0.23□□□□□ -2.37
GYPB-216ENST00000638448 PIGYQ3MUY2 71 aa0.23□□□□□ -2.37
GYPB-216ENST00000638448 COL5A1-AS1Q5SY13 56 aa0.23□□□□□ -2.37
GYPB-216ENST00000638448 Q5VSD8 79 aa0.23□□□□□ -2.37
GYPB-216ENST00000638448 DEFB123Q8N688 67 aa0.23□□□□□ -2.37
GYPB-216ENST00000638448 SERP2Q8N6R1 65 aa0.23□□□□□ -2.37
GYPB-216ENST00000638448 TRGV9Q99603 122 aa0.23□□□□□ -2.37
GYPB-216ENST00000638448 U3KQA8 63 aa0.23□□□□□ -2.37
GYPB-216ENST00000638448 DNAJC13O75165 2243 aa0.23□□□□□ -2.37
GYPB-216ENST00000638448 TET3O43151 1660 aa0.23□□□□□ -2.37
GYPB-216ENST00000638448 POLA1P09884 1462 aaPredicted RBP0.22□□□□□ -2.37
GYPB-216ENST00000638448 GAPVD1Q14C86 1478 aa0.22□□□□□ -2.37
GYPB-216ENST00000638448 MAGI1Q96QZ7 1491 aaPredicted RBP0.22□□□□□ -2.37
GYPB-216ENST00000638448 ZNF292O60281 2723 aa0.22□□□□□ -2.37
GYPB-216ENST00000638448 CCNB3Q8WWL7 1395 aa0.22□□□□□ -2.37
GYPB-216ENST00000638448 TRBV25-1A0A075B6N4 114 aa0.22□□□□□ -2.37
GYPB-216ENST00000638448 FXYD6-FXYD2A0A087WZ82 144 aa0.22□□□□□ -2.37
GYPB-216ENST00000638448 TRBV6-1A0A0K0K1D8 114 aa0.22□□□□□ -2.37
GYPB-216ENST00000638448 CFDP00746 253 aaPredicted RBP0.22□□□□□ -2.37
GYPB-216ENST00000638448 UQCRHP07919 91 aa0.22□□□□□ -2.37
GYPB-216ENST00000638448 ASIPP42127 132 aa0.22□□□□□ -2.37
GYPB-216ENST00000638448 PSMG4Q5JS54 123 aa0.22□□□□□ -2.37
GYPB-216ENST00000638448 LINC01600Q96MT4 127 aa0.22□□□□□ -2.37
GYPB-216ENST00000638448 SNHG12Q9BXW3 62 aa0.22□□□□□ -2.37
GYPB-216ENST00000638448 TOP2BQ02880 1626 aa0.22□□□□□ -2.37
GYPB-216ENST00000638448 IGSF10Q6WRI0 2623 aa0.22□□□□□ -2.37
GYPB-216ENST00000638448 BTAF1O14981 1849 aa0.22□□□□□ -2.37
GYPB-216ENST00000638448 ABCC10Q5T3U5 1492 aa0.22□□□□□ -2.37
GYPB-216ENST00000638448 FYCO1Q9BQS8 1478 aa0.22□□□□□ -2.37
GYPB-216ENST00000638448 MLH3Q9UHC1 1453 aa0.22□□□□□ -2.37
GYPB-216ENST00000638448 TOPAZ1Q8N9V7 1692 aa0.21□□□□□ -2.38
GYPB-216ENST00000638448 DMBT1Q9UGM3 2413 aaPredicted RBP0.21□□□□□ -2.38
GYPB-216ENST00000638448 A0A087WVE0 104 aa0.21□□□□□ -2.38
GYPB-216ENST00000638448 UQCRHLA0A096LP55 91 aa0.21□□□□□ -2.38
GYPB-216ENST00000638448 H7BZZ5 65 aa0.21□□□□□ -2.38
GYPB-216ENST00000638448 LCN9Q8WX39 176 aa0.21□□□□□ -2.38
GYPB-216ENST00000638448 TULP4Q9NRJ4 1543 aa0.21□□□□□ -2.38
GYPB-216ENST00000638448 ARHGEF12Q9NZN5 1544 aa0.21□□□□□ -2.38
GYPB-216ENST00000638448 NCOR2Q9Y618 2525 aa0.21□□□□□ -2.38
GYPB-216ENST00000638448 ABCA3Q99758 1704 aa0.21□□□□□ -2.38
GYPB-216ENST00000638448 PTPN13Q12923 2485 aa0.21□□□□□ -2.38
GYPB-216ENST00000638448 NCOR1O75376 2440 aa0.21□□□□□ -2.38
GYPB-216ENST00000638448 NHSL1Q5SYE7 1610 aa0.2□□□□□ -2.38
GYPB-216ENST00000638448 UBR5O95071 2799 aaPredicted RBP0.2□□□□□ -2.38
GYPB-216ENST00000638448 TRBV7-4A0A0J9YYF1 115 aa0.2□□□□□ -2.38
GYPB-216ENST00000638448 TRBV7-7A0A0K0K1E9 115 aa0.2□□□□□ -2.38
GYPB-216ENST00000638448 H3BQF6 201 aa0.2□□□□□ -2.38
GYPB-216ENST00000638448 SYS1-DBNDD2H3BUS1 97 aa0.2□□□□□ -2.38
GYPB-216ENST00000638448 Q9H521 79 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms