RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 FAM104BQ5XKR9 115 aa7.29□□□□□ -1.24
CACNA1A-250ENST00000637809 UNQ6190/PRO20217Q6UXQ8 127 aa7.29□□□□□ -1.24
CACNA1A-250ENST00000637809 C6orf48Q9UBA6 75 aa7.29□□□□□ -1.24
CACNA1A-250ENST00000637809 TRBV24-1A0A075B6N3 115 aa7.28□□□□□ -1.24
CACNA1A-250ENST00000637809 ZNF727A8MUV8 499 aa7.28□□□□□ -1.24
CACNA1A-250ENST00000637809 NDUFA1O15239 70 aa7.28□□□□□ -1.24
CACNA1A-250ENST00000637809 RPL32P62910 135 aaKnown RBP7.28□□□□□ -1.24
CACNA1A-250ENST00000637809 FAM19A5Q7Z5A7 132 aaPredicted RBP7.28□□□□□ -1.24
CACNA1A-250ENST00000637809 TMEM18Q96B42 140 aa7.28□□□□□ -1.24
CACNA1A-250ENST00000637809 C20orf78Q9BR46 151 aa7.28□□□□□ -1.24
CACNA1A-250ENST00000637809 SMDT1Q9H4I9 107 aa7.28□□□□□ -1.24
CACNA1A-250ENST00000637809 SRP19P09132 144 aaKnown RBP7.27□□□□□ -1.25
CACNA1A-250ENST00000637809 MRPS36P82909 103 aaKnown RBP7.27□□□□□ -1.25
CACNA1A-250ENST00000637809 KIAA0087Q14695 138 aa7.27□□□□□ -1.25
CACNA1A-250ENST00000637809 TMEM241Q24JQ0 296 aa7.27□□□□□ -1.25
CACNA1A-250ENST00000637809 EIF5A2Q9GZV4 153 aaKnown RBP7.27□□□□□ -1.25
CACNA1A-250ENST00000637809 SPANXA1Q9NS26 97 aa7.27□□□□□ -1.25
CACNA1A-250ENST00000637809 NAT8BQ9UHF3 227 aa7.27□□□□□ -1.25
CACNA1A-250ENST00000637809 LINC00862A6NCI5 91 aa7.26□□□□□ -1.25
CACNA1A-250ENST00000637809 GAGE2EQ4V326 116 aa7.26□□□□□ -1.25
CACNA1A-250ENST00000637809 GAGE2DQ9UEU5 116 aa7.26□□□□□ -1.25
CACNA1A-250ENST00000637809 FAT4Q6V0I7 4981 aa7.26□□□□□ -1.25
CACNA1A-250ENST00000637809 IFITM10A6NMD0 228 aa7.25□□□□□ -1.25
CACNA1A-250ENST00000637809 M0QXV9 152 aa7.25□□□□□ -1.25
CACNA1A-250ENST00000637809 TCAPO15273 167 aa7.25□□□□□ -1.25
CACNA1A-250ENST00000637809 TNFRSF6BO95407 300 aa7.25□□□□□ -1.25
CACNA1A-250ENST00000637809 FAM74A3Q4VXF1 159 aa7.25□□□□□ -1.25
CACNA1A-250ENST00000637809 SMIM2Q9BVW6 85 aa7.25□□□□□ -1.25
CACNA1A-250ENST00000637809 SMIM27A0A1W2PRY6 76 aa7.24□□□□□ -1.25
CACNA1A-250ENST00000637809 CKS2P33552 79 aa7.24□□□□□ -1.25
CACNA1A-250ENST00000637809 RPL23P62829 140 aaKnown RBP7.24□□□□□ -1.25
CACNA1A-250ENST00000637809 HBBP68871 147 aa7.24□□□□□ -1.25
CACNA1A-250ENST00000637809 PRR4Q16378 134 aa7.24□□□□□ -1.25
CACNA1A-250ENST00000637809 C9orf129Q5T035 196 aaKnown RBP7.24□□□□□ -1.25
CACNA1A-250ENST00000637809 D6R8Y8 96 aa7.22□□□□□ -1.25
CACNA1A-250ENST00000637809 NDUFC2-KCTD14E9PQ53 114 aa7.22□□□□□ -1.25
CACNA1A-250ENST00000637809 NPYP01303 97 aa7.22□□□□□ -1.25
CACNA1A-250ENST00000637809 RPL13AP40429 203 aaKnown RBP7.22□□□□□ -1.25
CACNA1A-250ENST00000637809 UBE2D1P51668 147 aa7.22□□□□□ -1.25
CACNA1A-250ENST00000637809 UBE2BP63146 152 aa7.22□□□□□ -1.25
CACNA1A-250ENST00000637809 LINC00242Q5T6M2 205 aa7.22□□□□□ -1.25
CACNA1A-250ENST00000637809 C2orf82Q6UX34 121 aa7.22□□□□□ -1.25
CACNA1A-250ENST00000637809 CARHSP1Q9Y2V2 147 aaKnown RBP7.22□□□□□ -1.25
CACNA1A-250ENST00000637809 TGIF2-C20orf24A0A0A6YYL0 155 aa7.21□□□□□ -1.26
CACNA1A-250ENST00000637809 TRBV30A0A0K0K1B3 111 aa7.21□□□□□ -1.26
CACNA1A-250ENST00000637809 A0A1B0GW15 77 aa7.21□□□□□ -1.26
CACNA1A-250ENST00000637809 C9JQL5 133 aa7.21□□□□□ -1.26
CACNA1A-250ENST00000637809 IGLV4-3A0A075B6K6 122 aa7.2□□□□□ -1.26
CACNA1A-250ENST00000637809 A0A1B0GXF2 115 aa7.2□□□□□ -1.26
CACNA1A-250ENST00000637809 ZNF861PO60384 105 aa7.2□□□□□ -1.26
CACNA1A-250ENST00000637809 ADIRFQ15847 76 aa7.2□□□□□ -1.26
CACNA1A-250ENST00000637809 KRTAP9-2Q9BYQ4 174 aa7.2□□□□□ -1.26
CACNA1A-250ENST00000637809 PYGO1Q9Y3Y4 419 aa7.2□□□□□ -1.26
CACNA1A-250ENST00000637809 AKAP14Q86UN6 197 aa7.19□□□□□ -1.26
CACNA1A-250ENST00000637809 MUC17Q685J3 4493 aa7.18□□□□□ -1.26
CACNA1A-250ENST00000637809 PPBPP02775 128 aa7.18□□□□□ -1.26
CACNA1A-250ENST00000637809 IFI27P40305 119 aaPredicted RBP7.18□□□□□ -1.26
CACNA1A-250ENST00000637809 MRPL54Q6P161 138 aaKnown RBP7.18□□□□□ -1.26
CACNA1A-250ENST00000637809 LINC01561Q8N1V8 128 aa7.18□□□□□ -1.26
CACNA1A-250ENST00000637809 NAT8Q9UHE5 227 aa7.18□□□□□ -1.26
CACNA1A-250ENST00000637809 F8W036 122 aa7.17□□□□□ -1.26
CACNA1A-250ENST00000637809 PACRGQ96M98 296 aaPredicted RBP7.17□□□□□ -1.26
CACNA1A-250ENST00000637809 A0A087X002 238 aa7.16□□□□□ -1.26
CACNA1A-250ENST00000637809 TSPAN13O95857 204 aa7.16□□□□□ -1.26
CACNA1A-250ENST00000637809 S100A8P05109 93 aa7.16□□□□□ -1.26
CACNA1A-250ENST00000637809 RAB5AP20339 215 aa7.16□□□□□ -1.26
CACNA1A-250ENST00000637809 SRSF3P84103 164 aaKnown RBP7.16□□□□□ -1.26
CACNA1A-250ENST00000637809 LCE2AQ5TA79 106 aaPredicted RBP7.16□□□□□ -1.26
CACNA1A-250ENST00000637809 ZC2HC1BQ5TFG8 222 aa7.16□□□□□ -1.26
CACNA1A-250ENST00000637809 LINC00173Q6ZV60 143 aa7.16□□□□□ -1.26
CACNA1A-250ENST00000637809 ORMDL3Q8N138 153 aa7.16□□□□□ -1.26
CACNA1A-250ENST00000637809 TMEM141Q96I45 108 aa7.16□□□□□ -1.26
CACNA1A-250ENST00000637809 C22orf24Q9Y442 160 aa7.16□□□□□ -1.26
CACNA1A-250ENST00000637809 A0A0U1RQV1 116 aa7.15□□□□□ -1.26
CACNA1A-250ENST00000637809 NUPR1O60356 82 aa7.15□□□□□ -1.26
CACNA1A-250ENST00000637809 TEX43Q6ZNM6 134 aa7.15□□□□□ -1.26
CACNA1A-250ENST00000637809 TMEM136Q6ZRR5 245 aa7.15□□□□□ -1.26
CACNA1A-250ENST00000637809 LINC00469Q8N7U9 141 aa7.15□□□□□ -1.26
CACNA1A-250ENST00000637809 PRSS47A8MTI9 375 aa7.14□□□□□ -1.27
CACNA1A-250ENST00000637809 PRELID3AQ96N28 172 aa7.14□□□□□ -1.27
CACNA1A-250ENST00000637809 AMELXQ99217 191 aa7.14□□□□□ -1.27
CACNA1A-250ENST00000637809 CTDSP1Q9GZU7 261 aa7.14□□□□□ -1.27
CACNA1A-250ENST00000637809 XAGE1AQ9HD64 81 aa7.14□□□□□ -1.27
CACNA1A-250ENST00000637809 LBHQ53QV2 105 aaPredicted RBP7.13□□□□□ -1.27
CACNA1A-250ENST00000637809 Q6ZN92 141 aa7.13□□□□□ -1.27
CACNA1A-250ENST00000637809 Q8IZM0 81 aa7.13□□□□□ -1.27
CACNA1A-250ENST00000637809 hCG_2014768A0A024R1R8 64 aa7.12□□□□□ -1.27
CACNA1A-250ENST00000637809 BCE1O60756 84 aa7.12□□□□□ -1.27
CACNA1A-250ENST00000637809 PRSS2P07478 247 aa7.12□□□□□ -1.27
CACNA1A-250ENST00000637809 CKS1BP61024 79 aa7.12□□□□□ -1.27
CACNA1A-250ENST00000637809 ATP5L2Q7Z4Y8 100 aa7.12□□□□□ -1.27
CACNA1A-250ENST00000637809 FAM19A3Q7Z5A8 133 aa7.12□□□□□ -1.27
CACNA1A-250ENST00000637809 C2orf88Q9BSF0 95 aa7.12□□□□□ -1.27
CACNA1A-250ENST00000637809 TP73-AS1Q9UF72 201 aa7.12□□□□□ -1.27
CACNA1A-250ENST00000637809 LOC389332A0A1B0GUA5 103 aa7.11□□□□□ -1.27
CACNA1A-250ENST00000637809 IGIPA6NJ69 53 aa7.11□□□□□ -1.27
CACNA1A-250ENST00000637809 C6orf226Q5I0X4 101 aa7.11□□□□□ -1.27
CACNA1A-250ENST00000637809 C2orf66Q6UXQ4 117 aa7.11□□□□□ -1.27
CACNA1A-250ENST00000637809 VCX2Q9H322 139 aa7.11□□□□□ -1.27
CACNA1A-250ENST00000637809 TOMM7Q9P0U1 55 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms