RNA–Protein interactions for RNA: ENST00000637432.1

CACNA1A-240, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-240ENST00000637432 REG3GQ6UW15 175 aa12.06□□□□□ -0.48
CACNA1A-240ENST00000637432 PATE2Q6UY27 113 aa12.06□□□□□ -0.48
CACNA1A-240ENST00000637432 C2orf48Q96LS8 159 aa12.05□□□□□ -0.48
CACNA1A-240ENST00000637432 C20orf203Q8NBC4 194 aa12.05□□□□□ -0.48
CACNA1A-240ENST00000637432 LST1O00453 97 aa12.05□□□□□ -0.48
CACNA1A-240ENST00000637432 NDUFC1O43677 76 aa12.05□□□□□ -0.48
CACNA1A-240ENST00000637432 WDR87Q6ZQQ6 2873 aa12.05□□□□□ -0.48
CACNA1A-240ENST00000637432 FAM19A3Q7Z5A8 133 aa12.04□□□□□ -0.48
CACNA1A-240ENST00000637432 M0R378 163 aa12.04□□□□□ -0.48
CACNA1A-240ENST00000637432 CRIP2P52943 208 aaPredicted RBP12.04□□□□□ -0.48
CACNA1A-240ENST00000637432 Q6ZQY7 126 aa12.04□□□□□ -0.48
CACNA1A-240ENST00000637432 BEAN1Q3B7T3 259 aa12.04□□□□□ -0.48
CACNA1A-240ENST00000637432 CCDC140Q96MF4 163 aa12.04□□□□□ -0.48
CACNA1A-240ENST00000637432 TNFRSF13BO14836 293 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-240ENST00000637432 SPACA4Q8TDM5 124 aa12.03□□□□□ -0.48
CACNA1A-240ENST00000637432 CSDC2Q9Y534 153 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-240ENST00000637432 IGLV3-1P01715 115 aa12.03□□□□□ -0.48
CACNA1A-240ENST00000637432 WISP2O76076 250 aa12.02□□□□□ -0.48
CACNA1A-240ENST00000637432 LINC01547P58512 204 aaPredicted RBP12.02□□□□□ -0.48
CACNA1A-240ENST00000637432 C9orf116Q5BN46 136 aaPredicted RBP12.02□□□□□ -0.48
CACNA1A-240ENST00000637432 PYGO1Q9Y3Y4 419 aa12.02□□□□□ -0.48
CACNA1A-240ENST00000637432 CRIPAKQ8N1N5 446 aa12.02□□□□□ -0.49
CACNA1A-240ENST00000637432 LINC00208Q96KT6 92 aa12.01□□□□□ -0.49
CACNA1A-240ENST00000637432 LELP1Q5T871 98 aa12.01□□□□□ -0.49
CACNA1A-240ENST00000637432 Q8NA96 180 aa12.01□□□□□ -0.49
CACNA1A-240ENST00000637432 COL4A4P53420 1690 aaPredicted RBP12□□□□□ -0.49
CACNA1A-240ENST00000637432 NUPR1O60356 82 aa12□□□□□ -0.49
CACNA1A-240ENST00000637432 MT-ATP8P03928 68 aa12□□□□□ -0.49
CACNA1A-240ENST00000637432 RBX1P62877 108 aa12□□□□□ -0.49
CACNA1A-240ENST00000637432 H7C423 109 aa12□□□□□ -0.49
CACNA1A-240ENST00000637432 MSMPQ1L6U9 139 aa12□□□□□ -0.49
CACNA1A-240ENST00000637432 ZNF80P51504 273 aaPredicted RBP11.99□□□□□ -0.49
CACNA1A-240ENST00000637432 CRYGAP11844 174 aa11.99□□□□□ -0.49
CACNA1A-240ENST00000637432 LRRC75A-AS1Q8N1F1 130 aa11.99□□□□□ -0.49
CACNA1A-240ENST00000637432 COA6Q5JTJ3 125 aaKnown RBP11.98□□□□□ -0.49
CACNA1A-240ENST00000637432 LINC01006Q8NI28 216 aa11.98□□□□□ -0.49
CACNA1A-240ENST00000637432 A0A1B0GXF2 115 aa11.98□□□□□ -0.49
CACNA1A-240ENST00000637432 IBA57-AS1B1ANH7 110 aa11.98□□□□□ -0.49
CACNA1A-240ENST00000637432 SMIM11BQ8TCY0 68 aa11.98□□□□□ -0.49
CACNA1A-240ENST00000637432 IGLV8-61A0A075B6I0 122 aa11.97□□□□□ -0.49
CACNA1A-240ENST00000637432 PMAIP1Q13794 54 aa11.97□□□□□ -0.49
CACNA1A-240ENST00000637432 SOSTDC1Q6X4U4 206 aa11.97□□□□□ -0.49
CACNA1A-240ENST00000637432 LINC00308Q8TCZ7 52 aa11.97□□□□□ -0.49
CACNA1A-240ENST00000637432 CD164L2Q6UWJ8 174 aa11.96□□□□□ -0.49
CACNA1A-240ENST00000637432 FAM167A-AS1Q96KT0 104 aa11.96□□□□□ -0.49
CACNA1A-240ENST00000637432 PSPHP1O15172 72 aa11.96□□□□□ -0.49
CACNA1A-240ENST00000637432 FRMD6-AS1P0C7T7 363 aa11.96□□□□□ -0.49
CACNA1A-240ENST00000637432 PRR3P79522 188 aaKnown RBP11.96□□□□□ -0.49
CACNA1A-240ENST00000637432 IGLV4-3A0A075B6K6 122 aa11.96□□□□□ -0.49
CACNA1A-240ENST00000637432 F8P00451 2351 aa11.96□□□□□ -0.5
CACNA1A-240ENST00000637432 FAM229AH3BQW9 127 aa11.96□□□□□ -0.5
CACNA1A-240ENST00000637432 Q9BRP9 147 aa11.95□□□□□ -0.5
CACNA1A-240ENST00000637432 C1orf195Q5TG92 126 aa11.95□□□□□ -0.5
CACNA1A-240ENST00000637432 COX6A2Q02221 97 aa11.95□□□□□ -0.5
CACNA1A-240ENST00000637432 IGFL2Q6UWQ7 119 aa11.95□□□□□ -0.5
CACNA1A-240ENST00000637432 TRIAP1O43715 76 aa11.95□□□□□ -0.5
CACNA1A-240ENST00000637432 CACNA1AO00555 2505 aa11.94□□□□□ -0.5
CACNA1A-240ENST00000637432 LMO4P61968 165 aa11.94□□□□□ -0.5
CACNA1A-240ENST00000637432 COX6B2Q6YFQ2 88 aa11.94□□□□□ -0.5
CACNA1A-240ENST00000637432 EBI3Q14213 229 aa11.94□□□□□ -0.5
CACNA1A-240ENST00000637432 ATP5EP2Q5VTU8 51 aa11.93□□□□□ -0.5
CACNA1A-240ENST00000637432 LINC00959A0A1B0GUT2 108 aa11.93□□□□□ -0.5
CACNA1A-240ENST00000637432 ODF3BA8MYP8 253 aa11.93□□□□□ -0.5
CACNA1A-240ENST00000637432 CYSRT1A8MQ03 144 aa11.93□□□□□ -0.5
CACNA1A-240ENST00000637432 K7EQG2 157 aa11.93□□□□□ -0.5
CACNA1A-240ENST00000637432 Q9UF83 564 aa11.93□□□□□ -0.5
CACNA1A-240ENST00000637432 Q6ZS46 218 aa11.93□□□□□ -0.5
CACNA1A-240ENST00000637432 COL4A3Q01955 1670 aa11.93□□□□□ -0.5
CACNA1A-240ENST00000637432 Q6ZTC4 211 aa11.92□□□□□ -0.5
CACNA1A-240ENST00000637432 NDUFA7O95182 113 aa11.92□□□□□ -0.5
CACNA1A-240ENST00000637432 ACACBO00763 2458 aa11.91□□□□□ -0.5
CACNA1A-240ENST00000637432 RNASE3P12724 160 aaKnown RBP11.91□□□□□ -0.5
CACNA1A-240ENST00000637432 C1orf147Q96MC9 270 aaPredicted RBP11.91□□□□□ -0.5
CACNA1A-240ENST00000637432 TRBV6-4A0A1B0GX49 114 aa11.9□□□□□ -0.5
CACNA1A-240ENST00000637432 ZNF73O43830 326 aaPredicted RBP11.9□□□□□ -0.5
CACNA1A-240ENST00000637432 hDV103S1A0JD37 113 aa11.89□□□□□ -0.51
CACNA1A-240ENST00000637432 TRBV30A0A0K0K1B3 111 aa11.89□□□□□ -0.51
CACNA1A-240ENST00000637432 SPRY4Q9C004 299 aa11.89□□□□□ -0.51
CACNA1A-240ENST00000637432 ZNF702PQ9H963 129 aa11.89□□□□□ -0.51
CACNA1A-240ENST00000637432 FN1P02751 2386 aaKnown RBP11.89□□□□□ -0.51
CACNA1A-240ENST00000637432 PIEZO2Q9H5I5 2752 aa11.89□□□□□ -0.51
CACNA1A-240ENST00000637432 IGLV1-47P01700 117 aa11.88□□□□□ -0.51
CACNA1A-240ENST00000637432 ACYP2P14621 99 aa11.88□□□□□ -0.51
CACNA1A-240ENST00000637432 SPINT4Q6UDR6 99 aa11.88□□□□□ -0.51
CACNA1A-240ENST00000637432 H0Y9P7 68 aa11.88□□□□□ -0.51
CACNA1A-240ENST00000637432 A0A1W2PNU3 283 aaPredicted RBP11.87□□□□□ -0.51
CACNA1A-240ENST00000637432 CHTF8P0CG12 524 aa11.87□□□□□ -0.51
CACNA1A-240ENST00000637432 UNQ6190/PRO20217Q6UXQ8 127 aa11.87□□□□□ -0.51
CACNA1A-240ENST00000637432 COL27A1Q8IZC6 1860 aaPredicted RBP11.87□□□□□ -0.51
CACNA1A-240ENST00000637432 C16orf90A8MZG2 172 aa11.87□□□□□ -0.51
CACNA1A-240ENST00000637432 TLN1Q9Y490 2541 aaKnown RBP11.87□□□□□ -0.51
CACNA1A-240ENST00000637432 LIMD2Q9BT23 127 aa11.86□□□□□ -0.51
CACNA1A-240ENST00000637432 HCG22E2RYF7 251 aa11.85□□□□□ -0.51
CACNA1A-240ENST00000637432 M0QY20 66 aa11.85□□□□□ -0.51
CACNA1A-240ENST00000637432 IMUPQ9GZP8 106 aa11.84□□□□□ -0.51
CACNA1A-240ENST00000637432 ZNF22P17026 224 aaPredicted RBP11.83□□□□□ -0.51
CACNA1A-240ENST00000637432 MRGPRG-AS1Q2M3A8 158 aa11.83□□□□□ -0.52
CACNA1A-240ENST00000637432 TLN2Q9Y4G6 2542 aa11.83□□□□□ -0.52
CACNA1A-240ENST00000637432 ODF3Q96PU9 254 aa11.82□□□□□ -0.52
CACNA1A-240ENST00000637432 COX17Q14061 63 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms