RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 MUC21A0A0G2JKD1 596 aa5.7□□□□□ -1.5
CACNA1A-236ENST00000637117 MUC21A0A140T8X8 626 aa5.7□□□□□ -1.5
CACNA1A-236ENST00000637117 SRSF9Q13242 221 aaKnown RBP eCLIP5.7□□□□□ -1.5
CACNA1A-236ENST00000637117 CENPWQ5EE01 88 aa5.7□□□□□ -1.5
CACNA1A-236ENST00000637117 LINC00469Q8N7U9 141 aa5.7□□□□□ -1.5
CACNA1A-236ENST00000637117 SMIM12Q96EX1 92 aa5.7□□□□□ -1.5
CACNA1A-236ENST00000637117 C12orf57Q99622 126 aa5.7□□□□□ -1.5
CACNA1A-236ENST00000637117 GFRA4Q9GZZ7 299 aa5.7□□□□□ -1.5
CACNA1A-236ENST00000637117 LPAP08519 4548 aa5.69□□□□□ -1.5
CACNA1A-236ENST00000637117 PCP4L1A6NKN8 68 aa5.69□□□□□ -1.5
CACNA1A-236ENST00000637117 K7EN84 100 aa5.69□□□□□ -1.5
CACNA1A-236ENST00000637117 SNAI2O43623 268 aa5.69□□□□□ -1.5
CACNA1A-236ENST00000637117 LTAP01374 205 aa5.69□□□□□ -1.5
CACNA1A-236ENST00000637117 TRGC1P0CF51 173 aa5.69□□□□□ -1.5
CACNA1A-236ENST00000637117 SMIM17P0DL12 118 aa5.69□□□□□ -1.5
CACNA1A-236ENST00000637117 GNG4P50150 75 aa5.69□□□□□ -1.5
CACNA1A-236ENST00000637117 COA6Q5JTJ3 125 aaKnown RBP5.69□□□□□ -1.5
CACNA1A-236ENST00000637117 SPANXN1Q5VSR9 72 aa5.69□□□□□ -1.5
CACNA1A-236ENST00000637117 OSTCQ9NRP0 149 aa5.69□□□□□ -1.5
CACNA1A-236ENST00000637117 FAM231DQ6ZW35 169 aa5.68□□□□□ -1.5
CACNA1A-236ENST00000637117 C15orf56Q8N910 161 aa5.68□□□□□ -1.5
CACNA1A-236ENST00000637117 TMEM243Q9BU79 118 aa5.68□□□□□ -1.5
CACNA1A-236ENST00000637117 M0QY20 66 aa5.67□□□□□ -1.5
CACNA1A-236ENST00000637117 OR5AL1P0C617 328 aa5.67□□□□□ -1.5
CACNA1A-236ENST00000637117 NDUFA6P56556 154 aa5.67□□□□□ -1.5
CACNA1A-236ENST00000637117 COX19Q49B96 90 aa5.67□□□□□ -1.5
CACNA1A-236ENST00000637117 HIGD2BQ4VC39 106 aa5.67□□□□□ -1.5
CACNA1A-236ENST00000637117 Q6ZRP5 223 aa5.67□□□□□ -1.5
CACNA1A-236ENST00000637117 HIST3H2BBQ8N257 126 aa5.67□□□□□ -1.5
CACNA1A-236ENST00000637117 V9GYV3 84 aa5.67□□□□□ -1.5
CACNA1A-236ENST00000637117 A0A096LNI7 61 aa5.66□□□□□ -1.5
CACNA1A-236ENST00000637117 IFITM10A6NMD0 228 aa5.66□□□□□ -1.5
CACNA1A-236ENST00000637117 H7C1H1 209 aa5.66□□□□□ -1.5
CACNA1A-236ENST00000637117 UBE2L6O14933 153 aa5.66□□□□□ -1.5
CACNA1A-236ENST00000637117 S100A2P29034 98 aa5.66□□□□□ -1.5
CACNA1A-236ENST00000637117 LINC00474Q9P2X8 69 aa5.66□□□□□ -1.5
CACNA1A-236ENST00000637117 IGKV3OR2-268A0A0C4DH90 116 aa5.65□□□□□ -1.5
CACNA1A-236ENST00000637117 SMIM27A0A1W2PRY6 76 aa5.65□□□□□ -1.5
CACNA1A-236ENST00000637117 MT-ND6P03923 174 aa5.65□□□□□ -1.5
CACNA1A-236ENST00000637117 MGPP08493 103 aa5.65□□□□□ -1.5
CACNA1A-236ENST00000637117 AP1S3Q96PC3 154 aa5.65□□□□□ -1.5
CACNA1A-236ENST00000637117 GNB1LQ9BYB4 327 aa5.65□□□□□ -1.5
CACNA1A-236ENST00000637117 XKRY2A2RUG3 117 aa5.64□□□□□ -1.51
CACNA1A-236ENST00000637117 FAM231BA6NCW3 169 aa5.64□□□□□ -1.51
CACNA1A-236ENST00000637117 RASL11AQ6T310 242 aa5.64□□□□□ -1.51
CACNA1A-236ENST00000637117 BAGE2Q86Y30 109 aa5.64□□□□□ -1.51
CACNA1A-236ENST00000637117 PGLYRP4Q96LB8 373 aa5.64□□□□□ -1.51
CACNA1A-236ENST00000637117 RNASE7Q9H1E1 156 aaKnown RBP5.64□□□□□ -1.51
CACNA1A-236ENST00000637117 TRAPPC1Q9Y5R8 145 aa5.64□□□□□ -1.51
CACNA1A-236ENST00000637117 GVQW2A0A096LPI5 108 aaPredicted RBP5.63□□□□□ -1.51
CACNA1A-236ENST00000637117 CHCHD10Q8WYQ3 142 aaPredicted RBP5.63□□□□□ -1.51
CACNA1A-236ENST00000637117 HIST1H2BLQ99880 126 aa5.63□□□□□ -1.51
CACNA1A-236ENST00000637117 NIT2Q9NQR4 276 aa5.63□□□□□ -1.51
CACNA1A-236ENST00000637117 COTL1Q14019 142 aa5.62□□□□□ -1.51
CACNA1A-236ENST00000637117 ATP5L2Q7Z4Y8 100 aa5.62□□□□□ -1.51
CACNA1A-236ENST00000637117 PACRGQ96M98 296 aaPredicted RBP5.62□□□□□ -1.51
CACNA1A-236ENST00000637117 TPPP3Q9BW30 176 aa5.62□□□□□ -1.51
CACNA1A-236ENST00000637117 PKIGQ9Y2B9 76 aa5.62□□□□□ -1.51
CACNA1A-236ENST00000637117 MUC2Q02817 5179 aa5.62□□□□□ -1.51
CACNA1A-236ENST00000637117 C19orf71A6NCJ1 209 aa5.61□□□□□ -1.51
CACNA1A-236ENST00000637117 ESDP10768 282 aa5.61□□□□□ -1.51
CACNA1A-236ENST00000637117 PYY3Q5JQD4 70 aa5.61□□□□□ -1.51
CACNA1A-236ENST00000637117 TMEM136Q6ZRR5 245 aa5.61□□□□□ -1.51
CACNA1A-236ENST00000637117 ZNF664Q8N3J9 261 aa5.61□□□□□ -1.51
CACNA1A-236ENST00000637117 OR10D4PQ8NGN7 298 aa5.61□□□□□ -1.51
CACNA1A-236ENST00000637117 TSKUQ8WUA8 353 aa5.61□□□□□ -1.51
CACNA1A-236ENST00000637117 NAT8BQ9UHF3 227 aa5.61□□□□□ -1.51
CACNA1A-236ENST00000637117 FABP4P15090 132 aa5.6□□□□□ -1.51
CACNA1A-236ENST00000637117 CACNG7P62955 275 aa5.6□□□□□ -1.51
CACNA1A-236ENST00000637117 AMMECR1LQ6DCA0 310 aa5.6□□□□□ -1.51
CACNA1A-236ENST00000637117 FER1L6-AS1Q8NA97 138 aa5.6□□□□□ -1.51
CACNA1A-236ENST00000637117 LINC00526Q96FQ7 95 aa5.6□□□□□ -1.51
CACNA1A-236ENST00000637117 CARD19Q96LW7 228 aa5.6□□□□□ -1.51
CACNA1A-236ENST00000637117 RPP21Q9H633 154 aaKnown RBP5.6□□□□□ -1.51
CACNA1A-236ENST00000637117 PSORS1C2Q9UIG4 136 aa5.6□□□□□ -1.51
CACNA1A-236ENST00000637117 IGLV9-49A0A0B4J1Y8 123 aa5.59□□□□□ -1.51
CACNA1A-236ENST00000637117 IGHV1-58A0A0C4DH39 117 aa5.59□□□□□ -1.51
CACNA1A-236ENST00000637117 A0A0U1RQV1 116 aa5.59□□□□□ -1.51
CACNA1A-236ENST00000637117 A0A1B0GXF2 115 aa5.59□□□□□ -1.51
CACNA1A-236ENST00000637117 A8MWL6 223 aa5.59□□□□□ -1.51
CACNA1A-236ENST00000637117 TSHBP01222 138 aa5.59□□□□□ -1.51
CACNA1A-236ENST00000637117 IGLC6P0CF74 106 aa5.59□□□□□ -1.51
CACNA1A-236ENST00000637117 JOSD1Q15040 202 aaPredicted RBP5.59□□□□□ -1.51
CACNA1A-236ENST00000637117 PDZD11Q5EBL8 140 aa5.59□□□□□ -1.51
CACNA1A-236ENST00000637117 RNASEKQ6P5S7 137 aaKnown RBP5.59□□□□□ -1.51
CACNA1A-236ENST00000637117 NUP35Q8NFH5 326 aa5.59□□□□□ -1.51
CACNA1A-236ENST00000637117 TRAV26-2A0A0B4J265 109 aa5.58□□□□□ -1.52
CACNA1A-236ENST00000637117 A0A1W2PNN7 141 aa5.58□□□□□ -1.52
CACNA1A-236ENST00000637117 HIGD1CA8MV81 97 aa5.58□□□□□ -1.52
CACNA1A-236ENST00000637117 F2Z2F3 143 aa5.58□□□□□ -1.52
CACNA1A-236ENST00000637117 NTF3P20783 257 aa5.58□□□□□ -1.52
CACNA1A-236ENST00000637117 XCL1P47992 114 aa5.58□□□□□ -1.52
CACNA1A-236ENST00000637117 RPS20P60866 119 aaKnown RBP5.58□□□□□ -1.52
CACNA1A-236ENST00000637117 SYCNQ0VAF6 134 aa5.58□□□□□ -1.52
CACNA1A-236ENST00000637117 OR2D3Q8NGH3 330 aa5.58□□□□□ -1.52
CACNA1A-236ENST00000637117 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.57□□□□□ -1.52
CACNA1A-236ENST00000637117 IGKV2-29A2NJV5 120 aaPredicted RBP5.57□□□□□ -1.52
CACNA1A-236ENST00000637117 H7C423 109 aa5.57□□□□□ -1.52
CACNA1A-236ENST00000637117 APCSP02743 223 aa5.57□□□□□ -1.52
CACNA1A-236ENST00000637117 FGF6P10767 208 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms