RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 UBR3Q6ZT12 1888 aa1.82□□□□□ -2.12
VIM-210ENST00000637053 ANKRD36A6QL64 1941 aa1.81□□□□□ -2.12
VIM-210ENST00000637053 NHSL1Q5SYE7 1610 aa1.81□□□□□ -2.12
VIM-210ENST00000637053 MYO7BQ6PIF6 2116 aa1.81□□□□□ -2.12
VIM-210ENST00000637053 RREB1Q92766 1687 aa1.81□□□□□ -2.12
VIM-210ENST00000637053 TRAV1-2A0A0B4J238 106 aa1.81□□□□□ -2.12
VIM-210ENST00000637053 A0A1B0GUT8 65 aa1.81□□□□□ -2.12
VIM-210ENST00000637053 A0A1W2PNU3 283 aaPredicted RBP1.81□□□□□ -2.12
VIM-210ENST00000637053 LRCOL1A6NCL2 159 aa1.81□□□□□ -2.12
VIM-210ENST00000637053 F8VRH5 84 aa1.81□□□□□ -2.12
VIM-210ENST00000637053 K7EMI3 77 aa1.81□□□□□ -2.12
VIM-210ENST00000637053 M0R3E3 92 aa1.81□□□□□ -2.12
VIM-210ENST00000637053 ZNF861PO60384 105 aa1.81□□□□□ -2.12
VIM-210ENST00000637053 IGKV1-17P01599 117 aa1.81□□□□□ -2.12
VIM-210ENST00000637053 CISD3P0C7P0 127 aa1.81□□□□□ -2.12
VIM-210ENST00000637053 Q9BRP9 147 aa1.81□□□□□ -2.12
VIM-210ENST00000637053 PLAC8Q9NZF1 115 aa1.81□□□□□ -2.12
VIM-210ENST00000637053 LINC01558Q9Y6Z2 57 aa1.81□□□□□ -2.12
VIM-210ENST00000637053 NUP214P35658 2090 aaPredicted RBP1.81□□□□□ -2.12
VIM-210ENST00000637053 SPTBP11277 2137 aa1.81□□□□□ -2.12
VIM-210ENST00000637053 KIF21BO75037 1637 aa1.8□□□□□ -2.12
VIM-210ENST00000637053 RICTORQ6R327 1708 aa1.8□□□□□ -2.12
VIM-210ENST00000637053 A0A0J9YWU9 116 aa1.8□□□□□ -2.12
VIM-210ENST00000637053 SMIM27A0A1W2PRY6 76 aa1.8□□□□□ -2.12
VIM-210ENST00000637053 DNAL4O96015 105 aa1.8□□□□□ -2.12
VIM-210ENST00000637053 ZGRF1Q86YA3 2104 aa1.8□□□□□ -2.12
VIM-210ENST00000637053 TTTY12Q9BZ98 90 aa1.8□□□□□ -2.12
VIM-210ENST00000637053 V9GYV3 84 aa1.8□□□□□ -2.12
VIM-210ENST00000637053 PRRC2BQ5JSZ5 2229 aaKnown RBP1.8□□□□□ -2.12
VIM-210ENST00000637053 ABCC8Q09428 1581 aa1.8□□□□□ -2.12
VIM-210ENST00000637053 SHPRHQ149N8 1683 aa1.8□□□□□ -2.12
VIM-210ENST00000637053 PI4KAP42356 2102 aa1.79□□□□□ -2.12
VIM-210ENST00000637053 ZFHX3Q15911 3703 aa1.79□□□□□ -2.12
VIM-210ENST00000637053 ZNF318Q5VUA4 2279 aa1.79□□□□□ -2.12
VIM-210ENST00000637053 M0R135 149 aa1.79□□□□□ -2.12
VIM-210ENST00000637053 CCL3L1P16619 93 aa1.79□□□□□ -2.12
VIM-210ENST00000637053 CCL18P55774 89 aa1.79□□□□□ -2.12
VIM-210ENST00000637053 SERF2P84101 59 aa1.79□□□□□ -2.12
VIM-210ENST00000637053 NREPQ16612 68 aa1.79□□□□□ -2.12
VIM-210ENST00000637053 COX7B2Q8TF08 81 aa1.79□□□□□ -2.12
VIM-210ENST00000637053 TMEM263Q8WUH6 116 aaKnown RBP1.79□□□□□ -2.12
VIM-210ENST00000637053 WFDC6Q9BQY6 131 aa1.79□□□□□ -2.12
VIM-210ENST00000637053 HIGD2AQ9BW72 106 aa1.79□□□□□ -2.12
VIM-210ENST00000637053 PRO2289Q9P1D8 64 aa1.79□□□□□ -2.12
VIM-210ENST00000637053 R4GMQ9 66 aa1.79□□□□□ -2.12
VIM-210ENST00000637053 TULP4Q9NRJ4 1543 aa1.79□□□□□ -2.12
VIM-210ENST00000637053 PARP4Q9UKK3 1724 aaKnown RBP1.79□□□□□ -2.12
VIM-210ENST00000637053 PAPPA2Q9BXP8 1791 aa1.79□□□□□ -2.12
VIM-210ENST00000637053 MDC1Q14676 2089 aaKnown RBP1.79□□□□□ -2.12
VIM-210ENST00000637053 TET1Q8NFU7 2136 aa1.78□□□□□ -2.12
VIM-210ENST00000637053 TIAM2Q8IVF5 1701 aa1.78□□□□□ -2.12
VIM-210ENST00000637053 NRXN3Q9Y4C0 1643 aa1.78□□□□□ -2.12
VIM-210ENST00000637053 IGLV4-69A0A075B6H9 119 aa1.78□□□□□ -2.12
VIM-210ENST00000637053 KRTAP13-3Q3SY46 172 aa1.78□□□□□ -2.12
VIM-210ENST00000637053 LCE3EQ5T5B0 92 aa1.78□□□□□ -2.12
VIM-210ENST00000637053 C4orf3Q8WVX3 66 aa1.78□□□□□ -2.12
VIM-210ENST00000637053 PATE1Q8WXA2 126 aa1.78□□□□□ -2.12
VIM-210ENST00000637053 LINC00846Q9NV44 126 aa1.78□□□□□ -2.12
VIM-210ENST00000637053 PSORS1C2Q9UIG4 136 aa1.78□□□□□ -2.12
VIM-210ENST00000637053 R4GN34 69 aa1.78□□□□□ -2.12
VIM-210ENST00000637053 ESPL1Q14674 2120 aa1.78□□□□□ -2.13
VIM-210ENST00000637053 SHROOM3Q8TF72 1996 aa1.78□□□□□ -2.13
VIM-210ENST00000637053 PCDH15Q96QU1 1955 aa1.78□□□□□ -2.13
VIM-210ENST00000637053 COL4A1P02462 1669 aa1.77□□□□□ -2.13
VIM-210ENST00000637053 IQGAP1P46940 1657 aa1.77□□□□□ -2.13
VIM-210ENST00000637053 SCN7AQ01118 1682 aa1.77□□□□□ -2.13
VIM-210ENST00000637053 LRRC37A3O60309 1634 aa1.77□□□□□ -2.13
VIM-210ENST00000637053 SLIT1O75093 1534 aa1.77□□□□□ -2.13
VIM-210ENST00000637053 TRAV21A0A0B4J279 112 aa1.77□□□□□ -2.13
VIM-210ENST00000637053 IGKV3OR2-268A0A0C4DH90 116 aa1.77□□□□□ -2.13
VIM-210ENST00000637053 NDUFB1O75438 58 aa1.77□□□□□ -2.13
VIM-210ENST00000637053 CTSGP08311 255 aa1.77□□□□□ -2.13
VIM-210ENST00000637053 ENHOQ6UWT2 76 aa1.77□□□□□ -2.13
VIM-210ENST00000637053 Q6ZTI0 123 aa1.77□□□□□ -2.13
VIM-210ENST00000637053 ZNF831Q5JPB2 1677 aa1.77□□□□□ -2.13
VIM-210ENST00000637053 SPAG17Q6Q759 2223 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 INTS1Q8N201 2190 aaKnown RBP1.76□□□□□ -2.13
VIM-210ENST00000637053 MED12Q93074 2177 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 LCE6AA0A183 80 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 CTXND1A0A1B0GTU2 59 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 J3QRE1 110 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 UQCR11O14957 56 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 IGLV3-1P01715 115 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 PDE6GP18545 87 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 ZNF137PP52743 207 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 SPINK7P58062 85 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 HCP5Q6MZN7 132 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 SPINT4Q6UDR6 99 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 LINC00612Q8N6U2 182 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 LINC00208Q96KT6 92 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 OBSCN-AS1Q96MR7 158 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 DNAJC13O75165 2243 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 QSER1Q2KHR3 1735 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 DOT1LQ8TEK3 1739 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 NRXN2Q9P2S2 1712 aa1.76□□□□□ -2.13
VIM-210ENST00000637053 TNRC6BQ9UPQ9 1833 aaKnown RBP1.75□□□□□ -2.13
VIM-210ENST00000637053 GCC2Q8IWJ2 1684 aa1.75□□□□□ -2.13
VIM-210ENST00000637053 CR1P17927 2039 aa1.75□□□□□ -2.13
VIM-210ENST00000637053 IGKV3D-15A0A087WSY6 115 aa1.75□□□□□ -2.13
VIM-210ENST00000637053 H0Y9P7 68 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms