RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 IGLV5-52A0A0A0MRZ9 124 aa4.96□□□□□ -1.62
CIITA-214ENST00000636238 LINC01549A6NIU2 74 aa4.96□□□□□ -1.62
CIITA-214ENST00000636238 UBE2L6O14933 153 aa4.96□□□□□ -1.62
CIITA-214ENST00000636238 FGF6P10767 208 aa4.96□□□□□ -1.62
CIITA-214ENST00000636238 S100A12P80511 92 aa4.96□□□□□ -1.62
CIITA-214ENST00000636238 PMVKQ15126 192 aa4.96□□□□□ -1.62
CIITA-214ENST00000636238 AMMECR1LQ6DCA0 310 aa4.96□□□□□ -1.62
CIITA-214ENST00000636238 DGAT2L7PQ6IED9 249 aa4.96□□□□□ -1.62
CIITA-214ENST00000636238 Q6ZUT4 128 aa4.96□□□□□ -1.62
CIITA-214ENST00000636238 VAMP8Q9BV40 100 aa4.96□□□□□ -1.62
CIITA-214ENST00000636238 CST9LQ9H4G1 147 aa4.96□□□□□ -1.62
CIITA-214ENST00000636238 PLA2G2DQ9UNK4 145 aa4.96□□□□□ -1.62
CIITA-214ENST00000636238 PAM16Q9Y3D7 125 aa4.96□□□□□ -1.62
CIITA-214ENST00000636238 PYGO1Q9Y3Y4 419 aa4.96□□□□□ -1.62
CIITA-214ENST00000636238 TRAV12-1A0A0B4J245 112 aa4.95□□□□□ -1.62
CIITA-214ENST00000636238 PCP4L1A6NKN8 68 aa4.95□□□□□ -1.62
CIITA-214ENST00000636238 TMEM262E9PQX1 116 aa4.95□□□□□ -1.62
CIITA-214ENST00000636238 DPM2O94777 84 aa4.95□□□□□ -1.62
CIITA-214ENST00000636238 IGKCP01834 107 aa4.95□□□□□ -1.62
CIITA-214ENST00000636238 DNAH10OSP0CZ25 163 aa4.95□□□□□ -1.62
CIITA-214ENST00000636238 SPATA45Q537H7 98 aa4.95□□□□□ -1.62
CIITA-214ENST00000636238 TMEM97Q5BJF2 176 aa4.95□□□□□ -1.62
CIITA-214ENST00000636238 ZNF664Q8N3J9 261 aa4.95□□□□□ -1.62
CIITA-214ENST00000636238 VCX2Q9H322 139 aa4.95□□□□□ -1.62
CIITA-214ENST00000636238 SPANXA1Q9NS26 97 aa4.95□□□□□ -1.62
CIITA-214ENST00000636238 FAT3Q8TDW7 4589 aa4.94□□□□□ -1.62
CIITA-214ENST00000636238 IGLV4-60A0A075B6I1 120 aa4.94□□□□□ -1.62
CIITA-214ENST00000636238 A0A0J9YXV3 536 aa4.94□□□□□ -1.62
CIITA-214ENST00000636238 F8VRH5 84 aa4.94□□□□□ -1.62
CIITA-214ENST00000636238 TIRAPP58753 221 aa4.94□□□□□ -1.62
CIITA-214ENST00000636238 LYPD5Q6UWN5 251 aa4.94□□□□□ -1.62
CIITA-214ENST00000636238 SH2D6Q7Z4S9 175 aa4.94□□□□□ -1.62
CIITA-214ENST00000636238 MRPL52Q86TS9 123 aaKnown RBP4.94□□□□□ -1.62
CIITA-214ENST00000636238 Q8N3U1 123 aa4.94□□□□□ -1.62
CIITA-214ENST00000636238 STPG4Q8N801 248 aa4.94□□□□□ -1.62
CIITA-214ENST00000636238 OR5A1Q8NGJ0 315 aa4.94□□□□□ -1.62
CIITA-214ENST00000636238 TMEM101Q96IK0 257 aa4.94□□□□□ -1.62
CIITA-214ENST00000636238 AMELXQ99217 191 aa4.94□□□□□ -1.62
CIITA-214ENST00000636238 TIMM21Q9BVV7 248 aa4.94□□□□□ -1.62
CIITA-214ENST00000636238 LRP1Q07954 4544 aaKnown RBP4.93□□□□□ -1.62
CIITA-214ENST00000636238 IGLV4-69A0A075B6H9 119 aa4.93□□□□□ -1.62
CIITA-214ENST00000636238 IGKV3OR2-268A0A0C4DH90 116 aa4.93□□□□□ -1.62
CIITA-214ENST00000636238 C11orf86A6NJI1 115 aa4.93□□□□□ -1.62
CIITA-214ENST00000636238 H7C423 109 aa4.93□□□□□ -1.62
CIITA-214ENST00000636238 MRPS36P82909 103 aaKnown RBP4.93□□□□□ -1.62
CIITA-214ENST00000636238 ANKRD39Q53RE8 183 aa4.93□□□□□ -1.62
CIITA-214ENST00000636238 Q6ZSA8 131 aa4.93□□□□□ -1.62
CIITA-214ENST00000636238 CDC42SE2Q9NRR3 84 aa4.93□□□□□ -1.62
CIITA-214ENST00000636238 LRCOL1A6NCL2 159 aa4.92□□□□□ -1.62
CIITA-214ENST00000636238 HSBP1L1C9JCN9 74 aa4.92□□□□□ -1.62
CIITA-214ENST00000636238 RBX1P62877 108 aa4.92□□□□□ -1.62
CIITA-214ENST00000636238 SMAGPQ0VAQ4 97 aa4.92□□□□□ -1.62
CIITA-214ENST00000636238 MPV17L2Q567V2 206 aa4.92□□□□□ -1.62
CIITA-214ENST00000636238 PAPPA-AS1Q5QFB9 102 aa4.92□□□□□ -1.62
CIITA-214ENST00000636238 LELP1Q5T871 98 aa4.92□□□□□ -1.62
CIITA-214ENST00000636238 LINC00528Q8N1L1 170 aa4.92□□□□□ -1.62
CIITA-214ENST00000636238 Q8N814 137 aa4.92□□□□□ -1.62
CIITA-214ENST00000636238 TRAV13-1A0A0B4J241 112 aa4.91□□□□□ -1.62
CIITA-214ENST00000636238 PSCAO43653 123 aa4.91□□□□□ -1.62
CIITA-214ENST00000636238 NPSP0C0P6 89 aa4.91□□□□□ -1.62
CIITA-214ENST00000636238 IGLC3P0DOY3 106 aa4.91□□□□□ -1.62
CIITA-214ENST00000636238 ZNF25P17030 456 aaPredicted RBP4.91□□□□□ -1.62
CIITA-214ENST00000636238 PLNP26678 52 aa4.91□□□□□ -1.62
CIITA-214ENST00000636238 FUSP35637 526 aaKnown RBP eCLIP4.91□□□□□ -1.62
CIITA-214ENST00000636238 UBE2D1P51668 147 aa4.91□□□□□ -1.62
CIITA-214ENST00000636238 PKIAP61925 76 aa4.91□□□□□ -1.62
CIITA-214ENST00000636238 COX6A2Q02221 97 aa4.91□□□□□ -1.62
CIITA-214ENST00000636238 TMEM170BQ5T4T1 132 aa4.91□□□□□ -1.62
CIITA-214ENST00000636238 CLPSL2Q6UWE3 100 aa4.91□□□□□ -1.62
CIITA-214ENST00000636238 C14orf144Q96I85 54 aa4.91□□□□□ -1.62
CIITA-214ENST00000636238 C2orf88Q9BSF0 95 aa4.91□□□□□ -1.62
CIITA-214ENST00000636238 CHAC1Q9BUX1 264 aa4.91□□□□□ -1.62
CIITA-214ENST00000636238 TP73-AS1Q9UF72 201 aa4.91□□□□□ -1.62
CIITA-214ENST00000636238 CSDC2Q9Y534 153 aaKnown RBP4.91□□□□□ -1.62
CIITA-214ENST00000636238 IGKV2D-26A0A0A0MRZ7 120 aa4.9□□□□□ -1.63
CIITA-214ENST00000636238 TRAV8-6A0A0B4J262 113 aa4.9□□□□□ -1.63
CIITA-214ENST00000636238 IGHV3-30P01768 117 aa4.9□□□□□ -1.63
CIITA-214ENST00000636238 IGHV3-33P01772 117 aa4.9□□□□□ -1.63
CIITA-214ENST00000636238 IGHV3-30-3P0DP02 117 aa4.9□□□□□ -1.63
CIITA-214ENST00000636238 IGHV3-30-5P0DP03 117 aa4.9□□□□□ -1.63
CIITA-214ENST00000636238 LINC01556Q5JQF7 62 aa4.9□□□□□ -1.63
CIITA-214ENST00000636238 WFDC10BQ8IUB3 73 aa4.9□□□□□ -1.63
CIITA-214ENST00000636238 TM2D2Q9BX73 214 aa4.9□□□□□ -1.63
CIITA-214ENST00000636238 IGHV3-64A0A075B6Q5 118 aa4.89□□□□□ -1.63
CIITA-214ENST00000636238 A0A1B0GUV1 79 aa4.89□□□□□ -1.63
CIITA-214ENST00000636238 TINCRA0A1B0GVN0 87 aa4.89□□□□□ -1.63
CIITA-214ENST00000636238 IBA57-AS1B1ANH7 110 aa4.89□□□□□ -1.63
CIITA-214ENST00000636238 TSTD3H0UI37 97 aa4.89□□□□□ -1.63
CIITA-214ENST00000636238 ANGP03950 147 aaKnown RBP4.89□□□□□ -1.63
CIITA-214ENST00000636238 ZNF22P17026 224 aaPredicted RBP4.89□□□□□ -1.63
CIITA-214ENST00000636238 NMUP48645 174 aa4.89□□□□□ -1.63
CIITA-214ENST00000636238 LINC00242Q5T6M2 205 aa4.89□□□□□ -1.63
CIITA-214ENST00000636238 LINC00269Q8N2A0 174 aa4.89□□□□□ -1.63
CIITA-214ENST00000636238 TTTY13Q9BZ97 58 aa4.89□□□□□ -1.63
CIITA-214ENST00000636238 GEMIN7Q9H840 131 aaKnown RBP4.89□□□□□ -1.63
CIITA-214ENST00000636238 RNF213Q63HN8 5207 aa4.89□□□□□ -1.63
CIITA-214ENST00000636238 PKHD1L1Q86WI1 4243 aa4.89□□□□□ -1.63
CIITA-214ENST00000636238 LINC00959A0A1B0GUT2 108 aa4.88□□□□□ -1.63
CIITA-214ENST00000636238 TMEM223A0PJW6 202 aa4.88□□□□□ -1.63
CIITA-214ENST00000636238 SPINK8P0C7L1 97 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms