RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 CYSRT1A8MQ03 144 aa11.75□□□□□ -0.53
CLN5-208ENST00000636183 MBD6Q96DN6 1003 aa11.75□□□□□ -0.53
CLN5-208ENST00000636183 EDN2P20800 178 aa11.75□□□□□ -0.53
CLN5-208ENST00000636183 CACNA1AO00555 2505 aa11.75□□□□□ -0.53
CLN5-208ENST00000636183 NHLRC4P0CG21 123 aaPredicted RBP11.75□□□□□ -0.53
CLN5-208ENST00000636183 C2orf48Q96LS8 159 aa11.75□□□□□ -0.53
CLN5-208ENST00000636183 CDPF1Q6NVV7 123 aa11.74□□□□□ -0.53
CLN5-208ENST00000636183 KIAA1549Q9HCM3 1950 aa11.74□□□□□ -0.53
CLN5-208ENST00000636183 COX6A2Q02221 97 aa11.73□□□□□ -0.53
CLN5-208ENST00000636183 ZNF73O43830 326 aaPredicted RBP11.71□□□□□ -0.53
CLN5-208ENST00000636183 IGLC6P0CF74 106 aa11.71□□□□□ -0.53
CLN5-208ENST00000636183 LINC00574Q9H8X3 128 aa11.71□□□□□ -0.53
CLN5-208ENST00000636183 TTC28Q96AY4 2481 aa11.71□□□□□ -0.54
CLN5-208ENST00000636183 FSTL3O95633 263 aa11.7□□□□□ -0.54
CLN5-208ENST00000636183 IGLV1-40P01703 118 aa11.7□□□□□ -0.54
CLN5-208ENST00000636183 C9orf116Q5BN46 136 aaPredicted RBP11.7□□□□□ -0.54
CLN5-208ENST00000636183 MDFIQ99750 246 aa11.7□□□□□ -0.54
CLN5-208ENST00000636183 C16orf90A8MZG2 172 aa11.7□□□□□ -0.54
CLN5-208ENST00000636183 LINC00643Q86TS7 51 aa11.69□□□□□ -0.54
CLN5-208ENST00000636183 CEP192Q8TEP8 1941 aa11.69□□□□□ -0.54
CLN5-208ENST00000636183 UNQ6190/PRO20217Q6UXQ8 127 aa11.69□□□□□ -0.54
CLN5-208ENST00000636183 NAV3Q8IVL0 2385 aa11.69□□□□□ -0.54
CLN5-208ENST00000636183 MYO18BQ8IUG5 2567 aa11.69□□□□□ -0.54
CLN5-208ENST00000636183 TSHBP01222 138 aa11.68□□□□□ -0.54
CLN5-208ENST00000636183 J3KT08 172 aa11.68□□□□□ -0.54
CLN5-208ENST00000636183 SNURFQ9Y675 71 aa11.68□□□□□ -0.54
CLN5-208ENST00000636183 A6NED7 52 aa11.68□□□□□ -0.54
CLN5-208ENST00000636183 PRR9Q5T870 116 aa11.67□□□□□ -0.54
CLN5-208ENST00000636183 SPACA4Q8TDM5 124 aa11.67□□□□□ -0.54
CLN5-208ENST00000636183 CRIP1P50238 77 aa11.66□□□□□ -0.54
CLN5-208ENST00000636183 RNASE3P12724 160 aaKnown RBP11.66□□□□□ -0.54
CLN5-208ENST00000636183 SMIM11BQ8TCY0 68 aa11.66□□□□□ -0.54
CLN5-208ENST00000636183 A0A1B0GXF2 115 aa11.65□□□□□ -0.54
CLN5-208ENST00000636183 TRIAP1O43715 76 aa11.65□□□□□ -0.54
CLN5-208ENST00000636183 BRWD1-AS2P59051 145 aa11.64□□□□□ -0.55
CLN5-208ENST00000636183 ODF3L2Q3SX64 289 aa11.64□□□□□ -0.55
CLN5-208ENST00000636183 CELA1Q9UNI1 258 aa11.64□□□□□ -0.55
CLN5-208ENST00000636183 EXPH5Q8NEV8 1989 aa11.64□□□□□ -0.55
CLN5-208ENST00000636183 Q9BRP9 147 aa11.64□□□□□ -0.55
CLN5-208ENST00000636183 IGLV1-51P01701 117 aa11.64□□□□□ -0.55
CLN5-208ENST00000636183 DEFB116Q30KQ4 102 aa11.64□□□□□ -0.55
CLN5-208ENST00000636183 COX17Q14061 63 aa11.63□□□□□ -0.55
CLN5-208ENST00000636183 SBSPONQ8IVN8 264 aa11.63□□□□□ -0.55
CLN5-208ENST00000636183 NDUFV3P56181 108 aaKnown RBP11.63□□□□□ -0.55
CLN5-208ENST00000636183 Q8N6K4 173 aa11.63□□□□□ -0.55
CLN5-208ENST00000636183 A0A0U1RQV1 116 aa11.62□□□□□ -0.55
CLN5-208ENST00000636183 LIMD2Q9BT23 127 aa11.62□□□□□ -0.55
CLN5-208ENST00000636183 ALPK3Q96L96 1907 aa11.61□□□□□ -0.55
CLN5-208ENST00000636183 C16orf95Q9H693 158 aa11.61□□□□□ -0.55
CLN5-208ENST00000636183 TRBV30A0A0K0K1B3 111 aa11.61□□□□□ -0.55
CLN5-208ENST00000636183 Q8IZM0 81 aa11.61□□□□□ -0.55
CLN5-208ENST00000636183 PYGO1Q9Y3Y4 419 aa11.61□□□□□ -0.55
CLN5-208ENST00000636183 PCOTHQ58A44 107 aa11.61□□□□□ -0.55
CLN5-208ENST00000636183 RNF185Q96GF1 192 aa11.61□□□□□ -0.55
CLN5-208ENST00000636183 MRPL55Q7Z7F7 128 aaKnown RBP11.6□□□□□ -0.55
CLN5-208ENST00000636183 FAM19A3Q7Z5A8 133 aa11.6□□□□□ -0.55
CLN5-208ENST00000636183 TRBV7-6A0A0J9YX20 115 aa11.6□□□□□ -0.55
CLN5-208ENST00000636183 COA6Q5JTJ3 125 aaKnown RBP11.6□□□□□ -0.55
CLN5-208ENST00000636183 PCDH15Q96QU1 1955 aa11.6□□□□□ -0.55
CLN5-208ENST00000636183 FHL3Q13643 280 aa11.59□□□□□ -0.55
CLN5-208ENST00000636183 CDC42SE2Q9NRR3 84 aa11.59□□□□□ -0.55
CLN5-208ENST00000636183 IGKV2D-30A0A075B6S6 120 aa11.59□□□□□ -0.55
CLN5-208ENST00000636183 TRBV27A0A0K0K1C4 114 aa11.59□□□□□ -0.55
CLN5-208ENST00000636183 IGKV2-30P06310 120 aa11.59□□□□□ -0.55
CLN5-208ENST00000636183 COX6B2Q6YFQ2 88 aa11.59□□□□□ -0.55
CLN5-208ENST00000636183 RAI1Q7Z5J4 1906 aaPredicted RBP11.58□□□□□ -0.56
CLN5-208ENST00000636183 EGFEM1PQ0D2K5 195 aa11.58□□□□□ -0.56
CLN5-208ENST00000636183 MAPKAPK5-AS1Q8N8E1 139 aa11.58□□□□□ -0.56
CLN5-208ENST00000636183 P0C879 139 aa11.58□□□□□ -0.56
CLN5-208ENST00000636183 PRR3P79522 188 aaKnown RBP11.58□□□□□ -0.56
CLN5-208ENST00000636183 KLLNB2CW77 178 aa11.58□□□□□ -0.56
CLN5-208ENST00000636183 TRBV10-3A0A0K0K1G6 114 aa11.57□□□□□ -0.56
CLN5-208ENST00000636183 PRLHP81277 87 aa11.57□□□□□ -0.56
CLN5-208ENST00000636183 ZNF295-AS1Q8N0V1 137 aa11.57□□□□□ -0.56
CLN5-208ENST00000636183 LTBP2Q14767 1821 aa11.57□□□□□ -0.56
CLN5-208ENST00000636183 CRIP2P52943 208 aaPredicted RBP11.57□□□□□ -0.56
CLN5-208ENST00000636183 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.57□□□□□ -0.56
CLN5-208ENST00000636183 NUP210LQ5VU65 1888 aa11.57□□□□□ -0.56
CLN5-208ENST00000636183 KIAA1549LQ6ZVL6 1849 aa11.56□□□□□ -0.56
CLN5-208ENST00000636183 ATP5EP2Q5VTU8 51 aa11.56□□□□□ -0.56
CLN5-208ENST00000636183 IGLV4-60A0A075B6I1 120 aa11.55□□□□□ -0.56
CLN5-208ENST00000636183 C11orf21Q9P2W6 132 aa11.55□□□□□ -0.56
CLN5-208ENST00000636183 LYPD5Q6UWN5 251 aa11.55□□□□□ -0.56
CLN5-208ENST00000636183 ARHGAP32A7KAX9 2087 aa11.55□□□□□ -0.56
CLN5-208ENST00000636183 FHL2Q14192 279 aa11.55□□□□□ -0.56
CLN5-208ENST00000636183 ANKHD1Q8IWZ3 2542 aaKnown RBP11.54□□□□□ -0.56
CLN5-208ENST00000636183 MRPS36P82909 103 aaKnown RBP11.54□□□□□ -0.56
CLN5-208ENST00000636183 LINC00208Q96KT6 92 aa11.54□□□□□ -0.56
CLN5-208ENST00000636183 TIMM17BO60830 172 aa11.54□□□□□ -0.56
CLN5-208ENST00000636183 NDUFC2-KCTD14E9PQ53 114 aa11.54□□□□□ -0.56
CLN5-208ENST00000636183 Q6ZPA2 131 aa11.53□□□□□ -0.56
CLN5-208ENST00000636183 LINC01547P58512 204 aaPredicted RBP11.53□□□□□ -0.56
CLN5-208ENST00000636183 FAM240AA0A1B0GVK7 77 aa11.52□□□□□ -0.56
CLN5-208ENST00000636183 CHCHD7Q9BUK0 85 aa11.51□□□□□ -0.57
CLN5-208ENST00000636183 NAV2Q8IVL1 2488 aa11.5□□□□□ -0.57
CLN5-208ENST00000636183 EIF4EBP1Q13541 118 aaPredicted RBP11.5□□□□□ -0.57
CLN5-208ENST00000636183 NRACQ8N912 160 aa11.5□□□□□ -0.57
CLN5-208ENST00000636183 TP73-AS1Q9UF72 201 aa11.5□□□□□ -0.57
CLN5-208ENST00000636183 V9GYY9 64 aa11.5□□□□□ -0.57
CLN5-208ENST00000636183 A0A087WSZ3 146 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms