RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 TRAV13-1A0A0B4J241 112 aa8.66□□□□□ -1.02
CACNA1A-219ENST00000635917 H3BRM9 83 aa8.66□□□□□ -1.02
CACNA1A-219ENST00000635917 SCGB1D4Q6XE38 83 aa8.66□□□□□ -1.02
CACNA1A-219ENST00000635917 HIST1H4GQ99525 98 aa8.66□□□□□ -1.02
CACNA1A-219ENST00000635917 CHCHD5Q9BSY4 110 aa8.66□□□□□ -1.02
CACNA1A-219ENST00000635917 A0A096LPF7 62 aa8.65□□□□□ -1.02
CACNA1A-219ENST00000635917 A0A1B0GWB2 263 aa8.65□□□□□ -1.02
CACNA1A-219ENST00000635917 SMIM1B2RUZ4 78 aa8.64□□□□□ -1.03
CACNA1A-219ENST00000635917 ZFAND6Q6FIF0 208 aa8.64□□□□□ -1.03
CACNA1A-219ENST00000635917 KPRPQ5T749 579 aaPredicted RBP8.64□□□□□ -1.03
CACNA1A-219ENST00000635917 LITAFQ99732 161 aa8.64□□□□□ -1.03
CACNA1A-219ENST00000635917 A0A0J9YXY3 114 aa8.63□□□□□ -1.03
CACNA1A-219ENST00000635917 IGHV3-30P01768 117 aa8.63□□□□□ -1.03
CACNA1A-219ENST00000635917 IGHV3-30-5P0DP03 117 aa8.63□□□□□ -1.03
CACNA1A-219ENST00000635917 RBX1P62877 108 aa8.63□□□□□ -1.03
CACNA1A-219ENST00000635917 MRPL23Q16540 153 aaKnown RBP8.63□□□□□ -1.03
CACNA1A-219ENST00000635917 IGHV3OR16-9A0A0B4J2B5 98 aa8.62□□□□□ -1.03
CACNA1A-219ENST00000635917 C9orf118A6NHY6 69 aa8.62□□□□□ -1.03
CACNA1A-219ENST00000635917 NDUFA12Q9UI09 145 aa8.62□□□□□ -1.03
CACNA1A-219ENST00000635917 K7EIL1 84 aa8.61□□□□□ -1.03
CACNA1A-219ENST00000635917 LCE2BO14633 110 aa8.61□□□□□ -1.03
CACNA1A-219ENST00000635917 NHP2Q9NX24 153 aaKnown RBP8.61□□□□□ -1.03
CACNA1A-219ENST00000635917 H3BNG1 76 aa8.61□□□□□ -1.03
CACNA1A-219ENST00000635917 K7ERJ3 54 aa8.61□□□□□ -1.03
CACNA1A-219ENST00000635917 SMIM13P0DJ93 91 aa8.61□□□□□ -1.03
CACNA1A-219ENST00000635917 HTN3P15516 51 aa8.61□□□□□ -1.03
CACNA1A-219ENST00000635917 PTTG1IPP53801 180 aa8.61□□□□□ -1.03
CACNA1A-219ENST00000635917 ICOSQ9Y6W8 199 aa8.61□□□□□ -1.03
CACNA1A-219ENST00000635917 LINC00959A0A1B0GUT2 108 aa8.6□□□□□ -1.03
CACNA1A-219ENST00000635917 PRB2P02812 416 aaPredicted RBP8.6□□□□□ -1.03
CACNA1A-219ENST00000635917 SRSF9Q13242 221 aaKnown RBP eCLIP8.6□□□□□ -1.03
CACNA1A-219ENST00000635917 Q6ZTC4 211 aa8.6□□□□□ -1.03
CACNA1A-219ENST00000635917 SH2D6Q7Z4S9 175 aa8.6□□□□□ -1.03
CACNA1A-219ENST00000635917 A0A0J9YWU9 116 aa8.59□□□□□ -1.03
CACNA1A-219ENST00000635917 NDUFA1O15239 70 aa8.59□□□□□ -1.03
CACNA1A-219ENST00000635917 TM2D3Q9BRN9 247 aa8.59□□□□□ -1.03
CACNA1A-219ENST00000635917 LELP1Q5T871 98 aa8.59□□□□□ -1.03
CACNA1A-219ENST00000635917 Q8N3U1 123 aa8.59□□□□□ -1.03
CACNA1A-219ENST00000635917 RAB37Q96AX2 223 aa8.59□□□□□ -1.03
CACNA1A-219ENST00000635917 ZNF625Q96I27 306 aaPredicted RBP8.59□□□□□ -1.03
CACNA1A-219ENST00000635917 TMEM262E9PQX1 116 aa8.58□□□□□ -1.04
CACNA1A-219ENST00000635917 CCL25O15444 150 aa8.58□□□□□ -1.04
CACNA1A-219ENST00000635917 UBE2V1Q13404 147 aa8.58□□□□□ -1.04
CACNA1A-219ENST00000635917 ADAMTSL4-AS1Q5T5F5 129 aa8.58□□□□□ -1.04
CACNA1A-219ENST00000635917 COL7A1Q02388 2944 aa8.58□□□□□ -1.04
CACNA1A-219ENST00000635917 DNAH9Q9NYC9 4486 aa8.58□□□□□ -1.04
CACNA1A-219ENST00000635917 A0A087WZ39 114 aa8.57□□□□□ -1.04
CACNA1A-219ENST00000635917 TMEM238C9JI98 176 aa8.57□□□□□ -1.04
CACNA1A-219ENST00000635917 H3BUT2 72 aa8.57□□□□□ -1.04
CACNA1A-219ENST00000635917 SPANXDQ9BXN6 97 aa8.57□□□□□ -1.04
CACNA1A-219ENST00000635917 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
CACNA1A-219ENST00000635917 IGKV3OR2-268A0A0C4DH90 116 aa8.57□□□□□ -1.04
CACNA1A-219ENST00000635917 TIMM17BO60830 172 aa8.57□□□□□ -1.04
CACNA1A-219ENST00000635917 LYPD5Q6UWN5 251 aa8.57□□□□□ -1.04
CACNA1A-219ENST00000635917 NAA38Q9BRA0 125 aaKnown RBP8.57□□□□□ -1.04
CACNA1A-219ENST00000635917 Q9H8V8 135 aa8.56□□□□□ -1.04
CACNA1A-219ENST00000635917 A0A1W2PPM0 123 aa8.55□□□□□ -1.04
CACNA1A-219ENST00000635917 IGLL5B9A064 214 aa8.55□□□□□ -1.04
CACNA1A-219ENST00000635917 CFC1BP0CG36 223 aa8.55□□□□□ -1.04
CACNA1A-219ENST00000635917 CFC1P0CG37 223 aa8.55□□□□□ -1.04
CACNA1A-219ENST00000635917 VAMP3Q15836 100 aa8.55□□□□□ -1.04
CACNA1A-219ENST00000635917 SPATA25Q9BR10 227 aa8.55□□□□□ -1.04
CACNA1A-219ENST00000635917 NANOS2P60321 138 aaKnown RBP8.54□□□□□ -1.04
CACNA1A-219ENST00000635917 MUSTN1Q8IVN3 82 aa8.54□□□□□ -1.04
CACNA1A-219ENST00000635917 LINC00269Q8N2A0 174 aa8.54□□□□□ -1.04
CACNA1A-219ENST00000635917 C11orf45Q8TAV5 145 aa8.54□□□□□ -1.04
CACNA1A-219ENST00000635917 A4D1N5 150 aa8.53□□□□□ -1.04
CACNA1A-219ENST00000635917 FAM229AH3BQW9 127 aa8.53□□□□□ -1.04
CACNA1A-219ENST00000635917 MIAQ16674 131 aa8.53□□□□□ -1.04
CACNA1A-219ENST00000635917 CLPSL2Q6UWE3 100 aa8.53□□□□□ -1.04
CACNA1A-219ENST00000635917 PRR34Q9NV39 138 aa8.53□□□□□ -1.04
CACNA1A-219ENST00000635917 STAB2Q8WWQ8 2551 aa8.53□□□□□ -1.04
CACNA1A-219ENST00000635917 REG3AQ06141 175 aa8.52□□□□□ -1.04
CACNA1A-219ENST00000635917 SS18Q15532 418 aa8.52□□□□□ -1.04
CACNA1A-219ENST00000635917 C5orf38Q86SI9 138 aa8.52□□□□□ -1.04
CACNA1A-219ENST00000635917 LINC01561Q8N1V8 128 aa8.52□□□□□ -1.04
CACNA1A-219ENST00000635917 ANGP03950 147 aaKnown RBP8.52□□□□□ -1.05
CACNA1A-219ENST00000635917 RPL24P83731 157 aaKnown RBP8.52□□□□□ -1.05
CACNA1A-219ENST00000635917 COX7B2Q8TF08 81 aa8.52□□□□□ -1.05
CACNA1A-219ENST00000635917 DEFB131BA0A096LNP1 70 aa8.51□□□□□ -1.05
CACNA1A-219ENST00000635917 XCL1P47992 114 aa8.51□□□□□ -1.05
CACNA1A-219ENST00000635917 HERV-K104P63124 156 aa8.51□□□□□ -1.05
CACNA1A-219ENST00000635917 CD164L2Q6UWJ8 174 aa8.51□□□□□ -1.05
CACNA1A-219ENST00000635917 A0A0B4J2C4 111 aa8.5□□□□□ -1.05
CACNA1A-219ENST00000635917 K7EP34 96 aa8.5□□□□□ -1.05
CACNA1A-219ENST00000635917 APOMO95445 188 aa8.5□□□□□ -1.05
CACNA1A-219ENST00000635917 TSPAN13O95857 204 aa8.5□□□□□ -1.05
CACNA1A-219ENST00000635917 ESRGQ1W209 222 aa8.5□□□□□ -1.05
CACNA1A-219ENST00000635917 DEFB121Q5J5C9 76 aa8.5□□□□□ -1.05
CACNA1A-219ENST00000635917 MRAPQ8TCY5 172 aa8.5□□□□□ -1.05
CACNA1A-219ENST00000635917 CHCHD10Q8WYQ3 142 aaPredicted RBP8.5□□□□□ -1.05
CACNA1A-219ENST00000635917 GAGE10A6NGK3 116 aa8.49□□□□□ -1.05
CACNA1A-219ENST00000635917 FABP2P12104 132 aa8.49□□□□□ -1.05
CACNA1A-219ENST00000635917 IFITM1P13164 125 aa8.49□□□□□ -1.05
CACNA1A-219ENST00000635917 ENHOQ6UWT2 76 aa8.49□□□□□ -1.05
CACNA1A-219ENST00000635917 DAND5Q8N907 189 aa8.49□□□□□ -1.05
CACNA1A-219ENST00000635917 PRSS2P07478 247 aa8.48□□□□□ -1.05
CACNA1A-219ENST00000635917 FOXI1Q12951 378 aa8.48□□□□□ -1.05
CACNA1A-219ENST00000635917 SOSTDC1Q6X4U4 206 aa8.48□□□□□ -1.05
CACNA1A-219ENST00000635917 WFDC10BQ8IUB3 73 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms