RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 CYSLTR1Q9Y271 337 aa6.37□□□□□ -1.39
LINC00339-210ENST00000635675 DYNC1H1Q14204 4646 aaKnown RBP6.37□□□□□ -1.39
LINC00339-210ENST00000635675 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.36□□□□□ -1.39
LINC00339-210ENST00000635675 CDK2AP2O75956 126 aa6.36□□□□□ -1.39
LINC00339-210ENST00000635675 PRSS1P07477 247 aa6.36□□□□□ -1.39
LINC00339-210ENST00000635675 MRPS36P82909 103 aaKnown RBP6.36□□□□□ -1.39
LINC00339-210ENST00000635675 C14orf177Q52M58 125 aa6.36□□□□□ -1.39
LINC00339-210ENST00000635675 ZC2HC1BQ5TFG8 222 aa6.36□□□□□ -1.39
LINC00339-210ENST00000635675 Q6ZUT4 128 aa6.36□□□□□ -1.39
LINC00339-210ENST00000635675 TOMM6Q96B49 74 aa6.36□□□□□ -1.39
LINC00339-210ENST00000635675 IFI27L1Q96BM0 104 aa6.36□□□□□ -1.39
LINC00339-210ENST00000635675 MAP1LC3CQ9BXW4 147 aa6.36□□□□□ -1.39
LINC00339-210ENST00000635675 KIAA1109Q2LD37 5005 aa6.36□□□□□ -1.39
LINC00339-210ENST00000635675 CCL25O15444 150 aa6.35□□□□□ -1.39
LINC00339-210ENST00000635675 FOXI1Q12951 378 aa6.35□□□□□ -1.39
LINC00339-210ENST00000635675 SS18Q15532 418 aa6.35□□□□□ -1.39
LINC00339-210ENST00000635675 RNASE13Q5GAN3 156 aaKnown RBP6.35□□□□□ -1.39
LINC00339-210ENST00000635675 PYY3Q5JQD4 70 aa6.35□□□□□ -1.39
LINC00339-210ENST00000635675 ATOH7Q8N100 152 aa6.35□□□□□ -1.39
LINC00339-210ENST00000635675 OPRPNQ99935 248 aaPredicted RBP6.35□□□□□ -1.39
LINC00339-210ENST00000635675 PYGO1Q9Y3Y4 419 aa6.35□□□□□ -1.39
LINC00339-210ENST00000635675 XCL1P47992 114 aa6.34□□□□□ -1.39
LINC00339-210ENST00000635675 Q6ZN92 141 aa6.34□□□□□ -1.39
LINC00339-210ENST00000635675 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.33□□□□□ -1.4
LINC00339-210ENST00000635675 SYS1-DBNDD2H3BUS1 97 aa6.33□□□□□ -1.4
LINC00339-210ENST00000635675 ATP5LO75964 103 aa6.33□□□□□ -1.4
LINC00339-210ENST00000635675 CD164L2Q6UWJ8 174 aa6.33□□□□□ -1.4
LINC00339-210ENST00000635675 C15orf56Q8N910 161 aa6.33□□□□□ -1.4
LINC00339-210ENST00000635675 IGLV4-3A0A075B6K6 122 aa6.33□□□□□ -1.4
LINC00339-210ENST00000635675 TRAV13-1A0A0B4J241 112 aa6.33□□□□□ -1.4
LINC00339-210ENST00000635675 IGIPA6NJ69 53 aa6.33□□□□□ -1.4
LINC00339-210ENST00000635675 G0S2P27469 103 aa6.33□□□□□ -1.4
LINC00339-210ENST00000635675 JOSD1Q15040 202 aaPredicted RBP6.33□□□□□ -1.4
LINC00339-210ENST00000635675 LINC01620Q4KN68 170 aa6.33□□□□□ -1.4
LINC00339-210ENST00000635675 CFAP161Q6P656 301 aa6.33□□□□□ -1.4
LINC00339-210ENST00000635675 LRP1BQ9NZR2 4599 aa6.32□□□□□ -1.4
LINC00339-210ENST00000635675 DNAH5Q8TE73 4624 aa6.32□□□□□ -1.4
LINC00339-210ENST00000635675 hDV102S1A0JD36 115 aa6.32□□□□□ -1.4
LINC00339-210ENST00000635675 C20orf202A1L168 122 aa6.32□□□□□ -1.4
LINC00339-210ENST00000635675 SLPIP03973 132 aa6.32□□□□□ -1.4
LINC00339-210ENST00000635675 NPSP0C0P6 89 aa6.32□□□□□ -1.4
LINC00339-210ENST00000635675 XGP55808 180 aa6.32□□□□□ -1.4
LINC00339-210ENST00000635675 ERASQ7Z444 233 aa6.32□□□□□ -1.4
LINC00339-210ENST00000635675 TMEM141Q96I45 108 aa6.32□□□□□ -1.4
LINC00339-210ENST00000635675 C12orf57Q99622 126 aa6.32□□□□□ -1.4
LINC00339-210ENST00000635675 GVQW2A0A096LPI5 108 aaPredicted RBP6.31□□□□□ -1.4
LINC00339-210ENST00000635675 SMIM6P0DI80 62 aa6.31□□□□□ -1.4
LINC00339-210ENST00000635675 CNBPP62633 177 aaKnown RBP6.31□□□□□ -1.4
LINC00339-210ENST00000635675 PET117Q6UWS5 81 aa6.31□□□□□ -1.4
LINC00339-210ENST00000635675 C9orf163Q8N9P6 203 aa6.31□□□□□ -1.4
LINC00339-210ENST00000635675 FAM30AQ9NZY2 134 aa6.31□□□□□ -1.4
LINC00339-210ENST00000635675 IGHV1-58A0A0C4DH39 117 aa6.3□□□□□ -1.4
LINC00339-210ENST00000635675 COX7A2LO14548 114 aa6.3□□□□□ -1.4
LINC00339-210ENST00000635675 Q6ZSA8 131 aa6.3□□□□□ -1.4
LINC00339-210ENST00000635675 LINC00518Q8N0U6 118 aa6.3□□□□□ -1.4
LINC00339-210ENST00000635675 AMELXQ99217 191 aa6.3□□□□□ -1.4
LINC00339-210ENST00000635675 TIMM17AQ99595 171 aa6.3□□□□□ -1.4
LINC00339-210ENST00000635675 KRTAP17-1Q9BYP8 105 aa6.3□□□□□ -1.4
LINC00339-210ENST00000635675 CHTOPQ9Y3Y2 248 aaKnown RBP6.3□□□□□ -1.4
LINC00339-210ENST00000635675 IGHV3OR16-9A0A0B4J2B5 98 aa6.29□□□□□ -1.4
LINC00339-210ENST00000635675 LINC01549A6NIU2 74 aa6.29□□□□□ -1.4
LINC00339-210ENST00000635675 ODF1Q14990 250 aa6.29□□□□□ -1.4
LINC00339-210ENST00000635675 MAJINQ3KP22 176 aa6.29□□□□□ -1.4
LINC00339-210ENST00000635675 HIGD2BQ4VC39 106 aa6.29□□□□□ -1.4
LINC00339-210ENST00000635675 LINC01545Q5VT33 79 aa6.29□□□□□ -1.4
LINC00339-210ENST00000635675 TEX43Q6ZNM6 134 aa6.29□□□□□ -1.4
LINC00339-210ENST00000635675 C5orf38Q86SI9 138 aa6.29□□□□□ -1.4
LINC00339-210ENST00000635675 VCX2Q9H322 139 aa6.29□□□□□ -1.4
LINC00339-210ENST00000635675 MRPL35Q9NZE8 188 aaKnown RBP6.29□□□□□ -1.4
LINC00339-210ENST00000635675 MALP21145 153 aa6.28□□□□□ -1.4
LINC00339-210ENST00000635675 UBE2D1P51668 147 aa6.28□□□□□ -1.4
LINC00339-210ENST00000635675 PMVKQ15126 192 aa6.28□□□□□ -1.4
LINC00339-210ENST00000635675 PAPPA-AS1Q5QFB9 102 aa6.28□□□□□ -1.4
LINC00339-210ENST00000635675 LINC00242Q5T6M2 205 aa6.28□□□□□ -1.4
LINC00339-210ENST00000635675 PAM16Q9Y3D7 125 aa6.28□□□□□ -1.4
LINC00339-210ENST00000635675 RYR1P21817 5038 aa6.28□□□□□ -1.4
LINC00339-210ENST00000635675 HERC2O95714 4834 aa6.27□□□□□ -1.4
LINC00339-210ENST00000635675 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.27□□□□□ -1.41
LINC00339-210ENST00000635675 COX6A2Q02221 97 aa6.27□□□□□ -1.41
LINC00339-210ENST00000635675 LCE2AQ5TA79 106 aaPredicted RBP6.27□□□□□ -1.41
LINC00339-210ENST00000635675 SDIM1Q6ZPB5 146 aa6.27□□□□□ -1.41
LINC00339-210ENST00000635675 FAM19A3Q7Z5A8 133 aa6.27□□□□□ -1.41
LINC00339-210ENST00000635675 C2orf88Q9BSF0 95 aa6.27□□□□□ -1.41
LINC00339-210ENST00000635675 VAMP8Q9BV40 100 aa6.27□□□□□ -1.41
LINC00339-210ENST00000635675 PRO1933Q9H354 126 aa6.27□□□□□ -1.41
LINC00339-210ENST00000635675 TRAV12-1A0A0B4J245 112 aa6.26□□□□□ -1.41
LINC00339-210ENST00000635675 A0A0J9YXV3 536 aa6.26□□□□□ -1.41
LINC00339-210ENST00000635675 DPM2O94777 84 aa6.26□□□□□ -1.41
LINC00339-210ENST00000635675 IGKCP01834 107 aa6.26□□□□□ -1.41
LINC00339-210ENST00000635675 S100A12P80511 92 aa6.26□□□□□ -1.41
LINC00339-210ENST00000635675 LINC00526Q96FQ7 95 aa6.26□□□□□ -1.41
LINC00339-210ENST00000635675 CST9LQ9H4G1 147 aa6.26□□□□□ -1.41
LINC00339-210ENST00000635675 HSPG2P98160 4391 aa6.26□□□□□ -1.41
LINC00339-210ENST00000635675 APOBP04114 4563 aaKnown RBP6.26□□□□□ -1.41
LINC00339-210ENST00000635675 A0A087WZ39 114 aa6.25□□□□□ -1.41
LINC00339-210ENST00000635675 C11orf86A6NJI1 115 aa6.25□□□□□ -1.41
LINC00339-210ENST00000635675 F8VRH5 84 aa6.25□□□□□ -1.41
LINC00339-210ENST00000635675 ZNF561-AS1K7EIQ3 104 aa6.25□□□□□ -1.41
LINC00339-210ENST00000635675 APOMO95445 188 aa6.25□□□□□ -1.41
LINC00339-210ENST00000635675 HAMPP81172 84 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms