RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 NFE4Q86UQ8 179 aa5.48□□□□□ -1.53
MECP2-220ENST00000631210 HIST1H2BLQ99880 126 aa5.48□□□□□ -1.53
MECP2-220ENST00000631210 C1orf43Q9BWL3 253 aa5.48□□□□□ -1.53
MECP2-220ENST00000631210 A0A087WTM6 91 aa5.47□□□□□ -1.53
MECP2-220ENST00000631210 A0A1B0GVY2 172 aa5.47□□□□□ -1.53
MECP2-220ENST00000631210 IGLC3P0DOY3 106 aa5.47□□□□□ -1.53
MECP2-220ENST00000631210 SS18Q15532 418 aa5.47□□□□□ -1.53
MECP2-220ENST00000631210 PAPPA-AS1Q5QFB9 102 aa5.47□□□□□ -1.53
MECP2-220ENST00000631210 Q6ZN92 141 aa5.47□□□□□ -1.53
MECP2-220ENST00000631210 C15orf56Q8N910 161 aa5.47□□□□□ -1.53
MECP2-220ENST00000631210 TM2D2Q9BX73 214 aa5.47□□□□□ -1.53
MECP2-220ENST00000631210 DYNC1H1Q14204 4646 aaKnown RBP5.46□□□□□ -1.53
MECP2-220ENST00000631210 TINCRA0A1B0GVN0 87 aa5.46□□□□□ -1.54
MECP2-220ENST00000631210 C11orf86A6NJI1 115 aa5.46□□□□□ -1.54
MECP2-220ENST00000631210 SYS1-DBNDD2H3BUS1 97 aa5.46□□□□□ -1.54
MECP2-220ENST00000631210 C3orf79P0CE67 100 aa5.46□□□□□ -1.54
MECP2-220ENST00000631210 C5orf38Q86SI9 138 aa5.46□□□□□ -1.54
MECP2-220ENST00000631210 NTN5Q8WTR8 489 aaPredicted RBP5.46□□□□□ -1.54
MECP2-220ENST00000631210 RMI2Q96E14 147 aa5.46□□□□□ -1.54
MECP2-220ENST00000631210 C2orf88Q9BSF0 95 aa5.46□□□□□ -1.54
MECP2-220ENST00000631210 MRPL35Q9NZE8 188 aaKnown RBP5.46□□□□□ -1.54
MECP2-220ENST00000631210 HSPB8Q9UJY1 196 aa5.46□□□□□ -1.54
MECP2-220ENST00000631210 TMA7Q9Y2S6 64 aaKnown RBP5.46□□□□□ -1.54
MECP2-220ENST00000631210 COX11Q9Y6N1 276 aa5.46□□□□□ -1.54
MECP2-220ENST00000631210 A0A087WZ39 114 aa5.45□□□□□ -1.54
MECP2-220ENST00000631210 LECT2O14960 151 aa5.45□□□□□ -1.54
MECP2-220ENST00000631210 SLPIP03973 132 aa5.45□□□□□ -1.54
MECP2-220ENST00000631210 S100A6P06703 90 aa5.45□□□□□ -1.54
MECP2-220ENST00000631210 PRSS1P07477 247 aa5.45□□□□□ -1.54
MECP2-220ENST00000631210 ZNF22P17026 224 aaPredicted RBP5.45□□□□□ -1.54
MECP2-220ENST00000631210 CDKN2A-AS1Q9UH64 79 aa5.45□□□□□ -1.54
MECP2-220ENST00000631210 CHTOPQ9Y3Y2 248 aaKnown RBP5.45□□□□□ -1.54
MECP2-220ENST00000631210 USP17L23D6RBM5 183 aa5.44□□□□□ -1.54
MECP2-220ENST00000631210 F8VRH5 84 aa5.44□□□□□ -1.54
MECP2-220ENST00000631210 FUSP35637 526 aaKnown RBP eCLIP5.44□□□□□ -1.54
MECP2-220ENST00000631210 KRTAP10-2P60368 255 aa5.44□□□□□ -1.54
MECP2-220ENST00000631210 KIAA0087Q14695 138 aa5.44□□□□□ -1.54
MECP2-220ENST00000631210 LINC01545Q5VT33 79 aa5.44□□□□□ -1.54
MECP2-220ENST00000631210 LINC01561Q8N1V8 128 aa5.44□□□□□ -1.54
MECP2-220ENST00000631210 PMCHL2Q9BQD1 86 aa5.44□□□□□ -1.54
MECP2-220ENST00000631210 CHAC1Q9BUX1 264 aa5.44□□□□□ -1.54
MECP2-220ENST00000631210 MAP1LC3CQ9BXW4 147 aa5.44□□□□□ -1.54
MECP2-220ENST00000631210 DNAH8Q96JB1 4490 aa5.44□□□□□ -1.54
MECP2-220ENST00000631210 IGHV3-64A0A075B6Q5 118 aa5.43□□□□□ -1.54
MECP2-220ENST00000631210 GVQW2A0A096LPI5 108 aaPredicted RBP5.43□□□□□ -1.54
MECP2-220ENST00000631210 SMIM1B2RUZ4 78 aa5.43□□□□□ -1.54
MECP2-220ENST00000631210 H0Y8G0 127 aa5.43□□□□□ -1.54
MECP2-220ENST00000631210 COX7A2LO14548 114 aa5.43□□□□□ -1.54
MECP2-220ENST00000631210 HERVK_113P63121 156 aa5.43□□□□□ -1.54
MECP2-220ENST00000631210 PET117Q6UWS5 81 aa5.43□□□□□ -1.54
MECP2-220ENST00000631210 LINC00336Q6ZUF6 198 aa5.43□□□□□ -1.54
MECP2-220ENST00000631210 Q8N814 137 aa5.43□□□□□ -1.54
MECP2-220ENST00000631210 LRP1BQ9NZR2 4599 aa5.43□□□□□ -1.54
MECP2-220ENST00000631210 IGLV5-39A0A0G2JS06 123 aa5.42□□□□□ -1.54
MECP2-220ENST00000631210 PSCAO43653 123 aa5.42□□□□□ -1.54
MECP2-220ENST00000631210 SEC11AP67812 179 aa5.42□□□□□ -1.54
MECP2-220ENST00000631210 LINC00526Q96FQ7 95 aa5.42□□□□□ -1.54
MECP2-220ENST00000631210 IGHV1-58A0A0C4DH39 117 aa5.41□□□□□ -1.54
MECP2-220ENST00000631210 TMEM223A0PJW6 202 aa5.41□□□□□ -1.54
MECP2-220ENST00000631210 SPINK8P0C7L1 97 aa5.41□□□□□ -1.54
MECP2-220ENST00000631210 S100A2P29034 98 aa5.41□□□□□ -1.54
MECP2-220ENST00000631210 KRTDAPP60985 99 aa5.41□□□□□ -1.54
MECP2-220ENST00000631210 HIGD2BQ4VC39 106 aa5.41□□□□□ -1.54
MECP2-220ENST00000631210 LINC00469Q8N7U9 141 aa5.41□□□□□ -1.54
MECP2-220ENST00000631210 GEMIN7Q9H840 131 aaKnown RBP5.41□□□□□ -1.54
MECP2-220ENST00000631210 DPM2O94777 84 aa5.4□□□□□ -1.54
MECP2-220ENST00000631210 OR10D4PQ8NGN7 298 aa5.4□□□□□ -1.54
MECP2-220ENST00000631210 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.39□□□□□ -1.55
MECP2-220ENST00000631210 IGKCP01834 107 aa5.39□□□□□ -1.55
MECP2-220ENST00000631210 TSPEAR-AS2P59090 65 aa5.39□□□□□ -1.55
MECP2-220ENST00000631210 CNBPP62633 177 aaKnown RBP5.39□□□□□ -1.55
MECP2-220ENST00000631210 TMEM170BQ5T4T1 132 aa5.39□□□□□ -1.55
MECP2-220ENST00000631210 C10orf25Q5T742 122 aa5.39□□□□□ -1.55
MECP2-220ENST00000631210 ORAOV1Q8WV07 137 aa5.39□□□□□ -1.55
MECP2-220ENST00000631210 EPPK1P58107 5090 aaKnown RBP5.39□□□□□ -1.55
MECP2-220ENST00000631210 hDV102S1A0JD36 115 aa5.38□□□□□ -1.55
MECP2-220ENST00000631210 MALP21145 153 aa5.38□□□□□ -1.55
MECP2-220ENST00000631210 PLNP26678 52 aa5.38□□□□□ -1.55
MECP2-220ENST00000631210 SPAG11BQ08648 103 aa5.38□□□□□ -1.55
MECP2-220ENST00000631210 CFAP161Q6P656 301 aa5.38□□□□□ -1.55
MECP2-220ENST00000631210 C2orf82Q6UX34 121 aa5.38□□□□□ -1.55
MECP2-220ENST00000631210 Q6ZRU5 148 aa5.38□□□□□ -1.55
MECP2-220ENST00000631210 APOBP04114 4563 aaKnown RBP5.37□□□□□ -1.55
MECP2-220ENST00000631210 APOMO95445 188 aa5.37□□□□□ -1.55
MECP2-220ENST00000631210 MAJINQ3KP22 176 aa5.37□□□□□ -1.55
MECP2-220ENST00000631210 LINC01620Q4KN68 170 aa5.37□□□□□ -1.55
MECP2-220ENST00000631210 C14orf177Q52M58 125 aa5.37□□□□□ -1.55
MECP2-220ENST00000631210 UNQ6190/PRO20217Q6UXQ8 127 aa5.37□□□□□ -1.55
MECP2-220ENST00000631210 Q8IZM0 81 aa5.37□□□□□ -1.55
MECP2-220ENST00000631210 ATOH7Q8N100 152 aa5.37□□□□□ -1.55
MECP2-220ENST00000631210 STPG4Q8N801 248 aa5.37□□□□□ -1.55
MECP2-220ENST00000631210 C2orf48Q96LS8 159 aa5.37□□□□□ -1.55
MECP2-220ENST00000631210 IGKV2D-26A0A0A0MRZ7 120 aa5.36□□□□□ -1.55
MECP2-220ENST00000631210 H3BRM9 83 aa5.36□□□□□ -1.55
MECP2-220ENST00000631210 KRTAP10-1P60331 282 aa5.36□□□□□ -1.55
MECP2-220ENST00000631210 JOSD1Q15040 202 aaPredicted RBP5.36□□□□□ -1.55
MECP2-220ENST00000631210 ANKRD39Q53RE8 183 aa5.36□□□□□ -1.55
MECP2-220ENST00000631210 C9orf163Q8N9P6 203 aa5.36□□□□□ -1.55
MECP2-220ENST00000631210 COX7B2Q8TF08 81 aa5.36□□□□□ -1.55
MECP2-220ENST00000631210 ZNF625Q96I27 306 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms