RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 PSCAO43653 123 aa5.69□□□□□ -1.5
SGMS1-211ENST00000626236 HSPB8Q9UJY1 196 aa5.69□□□□□ -1.5
SGMS1-211ENST00000626236 KRTAP9-6A0A140TA67 174 aa5.68□□□□□ -1.5
SGMS1-211ENST00000626236 GAGE12HA6NDE8 117 aa5.68□□□□□ -1.5
SGMS1-211ENST00000626236 PRSS29PA6NIE9 313 aa5.68□□□□□ -1.5
SGMS1-211ENST00000626236 PRSS1P07477 247 aa5.68□□□□□ -1.5
SGMS1-211ENST00000626236 S100A2P29034 98 aa5.68□□□□□ -1.5
SGMS1-211ENST00000626236 XCL1P47992 114 aa5.68□□□□□ -1.5
SGMS1-211ENST00000626236 SNRPEP62304 92 aaKnown RBP5.68□□□□□ -1.5
SGMS1-211ENST00000626236 PMVKQ15126 192 aa5.68□□□□□ -1.5
SGMS1-211ENST00000626236 HIST3H2BBQ8N257 126 aa5.68□□□□□ -1.5
SGMS1-211ENST00000626236 CHCHD10Q8WYQ3 142 aaPredicted RBP5.68□□□□□ -1.5
SGMS1-211ENST00000626236 TM2D2Q9BX73 214 aa5.68□□□□□ -1.5
SGMS1-211ENST00000626236 CST9LQ9H4G1 147 aa5.68□□□□□ -1.5
SGMS1-211ENST00000626236 UBE2D1P51668 147 aa5.67□□□□□ -1.5
SGMS1-211ENST00000626236 ANKRD39Q53RE8 183 aa5.67□□□□□ -1.5
SGMS1-211ENST00000626236 Q6ZRN7 208 aaPredicted RBP5.67□□□□□ -1.5
SGMS1-211ENST00000626236 COX11Q9Y6N1 276 aa5.67□□□□□ -1.5
SGMS1-211ENST00000626236 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.67□□□□□ -1.5
SGMS1-211ENST00000626236 A0A0J9YXV3 536 aa5.66□□□□□ -1.5
SGMS1-211ENST00000626236 C5orf52A6NGY3 159 aa5.66□□□□□ -1.5
SGMS1-211ENST00000626236 RTL8CO15255 209 aa5.66□□□□□ -1.5
SGMS1-211ENST00000626236 FOXI1Q12951 378 aa5.66□□□□□ -1.5
SGMS1-211ENST00000626236 LINC00242Q5T6M2 205 aa5.66□□□□□ -1.5
SGMS1-211ENST00000626236 KRTAP26-1Q6PEX3 210 aa5.66□□□□□ -1.5
SGMS1-211ENST00000626236 PACRGQ96M98 296 aaPredicted RBP5.66□□□□□ -1.5
SGMS1-211ENST00000626236 MAP1LC3CQ9BXW4 147 aa5.66□□□□□ -1.5
SGMS1-211ENST00000626236 DNAH17Q9UFH2 4485 aa5.66□□□□□ -1.5
SGMS1-211ENST00000626236 TRAV12-1A0A0B4J245 112 aa5.65□□□□□ -1.5
SGMS1-211ENST00000626236 SEC11AP67812 179 aa5.65□□□□□ -1.5
SGMS1-211ENST00000626236 COX6A2Q02221 97 aa5.65□□□□□ -1.5
SGMS1-211ENST00000626236 CD164L2Q6UWJ8 174 aa5.65□□□□□ -1.5
SGMS1-211ENST00000626236 FAM19A3Q7Z5A8 133 aa5.65□□□□□ -1.5
SGMS1-211ENST00000626236 MAPKAPK5-AS1Q8N8E1 139 aa5.65□□□□□ -1.5
SGMS1-211ENST00000626236 HIST1H2BLQ99880 126 aa5.65□□□□□ -1.5
SGMS1-211ENST00000626236 GEMIN7Q9H840 131 aaKnown RBP5.65□□□□□ -1.5
SGMS1-211ENST00000626236 CHTOPQ9Y3Y2 248 aaKnown RBP5.65□□□□□ -1.5
SGMS1-211ENST00000626236 IGLV4-69A0A075B6H9 119 aa5.64□□□□□ -1.51
SGMS1-211ENST00000626236 TINCRA0A1B0GVN0 87 aa5.64□□□□□ -1.51
SGMS1-211ENST00000626236 LECT2O14960 151 aa5.64□□□□□ -1.51
SGMS1-211ENST00000626236 IGLC3P0DOY3 106 aa5.64□□□□□ -1.51
SGMS1-211ENST00000626236 KRTDAPP60985 99 aa5.64□□□□□ -1.51
SGMS1-211ENST00000626236 HERVK_113P63121 156 aa5.64□□□□□ -1.51
SGMS1-211ENST00000626236 C5orf38Q86SI9 138 aa5.64□□□□□ -1.51
SGMS1-211ENST00000626236 CHAC1Q9BUX1 264 aa5.64□□□□□ -1.51
SGMS1-211ENST00000626236 MRPL35Q9NZE8 188 aaKnown RBP5.64□□□□□ -1.51
SGMS1-211ENST00000626236 IGHV3OR16-9A0A0B4J2B5 98 aa5.63□□□□□ -1.51
SGMS1-211ENST00000626236 F8VRH5 84 aa5.63□□□□□ -1.51
SGMS1-211ENST00000626236 SYS1-DBNDD2H3BUS1 97 aa5.63□□□□□ -1.51
SGMS1-211ENST00000626236 COX7A2LO14548 114 aa5.63□□□□□ -1.51
SGMS1-211ENST00000626236 C3orf79P0CE67 100 aa5.63□□□□□ -1.51
SGMS1-211ENST00000626236 MALP21145 153 aa5.63□□□□□ -1.51
SGMS1-211ENST00000626236 ODF1Q14990 250 aa5.63□□□□□ -1.51
SGMS1-211ENST00000626236 SPATA12Q7Z6I5 190 aa5.63□□□□□ -1.51
SGMS1-211ENST00000626236 LINC00469Q8N7U9 141 aa5.63□□□□□ -1.51
SGMS1-211ENST00000626236 PMCHL2Q9BQD1 86 aa5.63□□□□□ -1.51
SGMS1-211ENST00000626236 FAT2Q9NYQ8 4349 aa5.63□□□□□ -1.51
SGMS1-211ENST00000626236 LRCOL1A6NCL2 159 aa5.62□□□□□ -1.51
SGMS1-211ENST00000626236 C11orf86A6NJI1 115 aa5.62□□□□□ -1.51
SGMS1-211ENST00000626236 USP17L23D6RBM5 183 aa5.62□□□□□ -1.51
SGMS1-211ENST00000626236 WFDC2Q14508 124 aa5.62□□□□□ -1.51
SGMS1-211ENST00000626236 PET117Q6UWS5 81 aa5.62□□□□□ -1.51
SGMS1-211ENST00000626236 CDKN2A-AS1Q9UH64 79 aa5.62□□□□□ -1.51
SGMS1-211ENST00000626236 IGLV5-45A0A087WSX0 123 aa5.61□□□□□ -1.51
SGMS1-211ENST00000626236 A0A087WTM6 91 aa5.61□□□□□ -1.51
SGMS1-211ENST00000626236 A0A087WZ39 114 aa5.61□□□□□ -1.51
SGMS1-211ENST00000626236 IGHV1-58A0A0C4DH39 117 aa5.61□□□□□ -1.51
SGMS1-211ENST00000626236 APOMO95445 188 aa5.61□□□□□ -1.51
SGMS1-211ENST00000626236 PLNP26678 52 aa5.61□□□□□ -1.51
SGMS1-211ENST00000626236 PKD1P98161 4303 aa5.61□□□□□ -1.51
SGMS1-211ENST00000626236 TMEM170BQ5T4T1 132 aa5.61□□□□□ -1.51
SGMS1-211ENST00000626236 CFAP161Q6P656 301 aa5.61□□□□□ -1.51
SGMS1-211ENST00000626236 LINC00336Q6ZUF6 198 aa5.61□□□□□ -1.51
SGMS1-211ENST00000626236 C15orf56Q8N910 161 aa5.61□□□□□ -1.51
SGMS1-211ENST00000626236 hDV102S1A0JD36 115 aa5.6□□□□□ -1.51
SGMS1-211ENST00000626236 C20orf202A1L168 122 aa5.6□□□□□ -1.51
SGMS1-211ENST00000626236 H3BRM9 83 aa5.6□□□□□ -1.51
SGMS1-211ENST00000626236 DPM2O94777 84 aa5.6□□□□□ -1.51
SGMS1-211ENST00000626236 IGKCP01834 107 aa5.6□□□□□ -1.51
SGMS1-211ENST00000626236 SPINK8P0C7L1 97 aa5.6□□□□□ -1.51
SGMS1-211ENST00000626236 ZNF22P17026 224 aaPredicted RBP5.6□□□□□ -1.51
SGMS1-211ENST00000626236 HIGD2BQ4VC39 106 aa5.6□□□□□ -1.51
SGMS1-211ENST00000626236 LINC01545Q5VT33 79 aa5.6□□□□□ -1.51
SGMS1-211ENST00000626236 Q8N814 137 aa5.6□□□□□ -1.51
SGMS1-211ENST00000626236 OR10D4PQ8NGN7 298 aa5.6□□□□□ -1.51
SGMS1-211ENST00000626236 ORAOV1Q8WV07 137 aa5.6□□□□□ -1.51
SGMS1-211ENST00000626236 DNAH11Q96DT5 4516 aa5.6□□□□□ -1.51
SGMS1-211ENST00000626236 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.59□□□□□ -1.51
SGMS1-211ENST00000626236 IGHV3-64A0A075B6Q5 118 aa5.59□□□□□ -1.51
SGMS1-211ENST00000626236 SMIM1B2RUZ4 78 aa5.59□□□□□ -1.51
SGMS1-211ENST00000626236 C14orf177Q52M58 125 aa5.59□□□□□ -1.51
SGMS1-211ENST00000626236 LINC01561Q8N1V8 128 aa5.59□□□□□ -1.51
SGMS1-211ENST00000626236 KRTAP4-12Q9BQ66 201 aa5.59□□□□□ -1.51
SGMS1-211ENST00000626236 HECTD4Q9Y4D8 3996 aa5.58□□□□□ -1.52
SGMS1-211ENST00000626236 GVQW2A0A096LPI5 108 aaPredicted RBP5.58□□□□□ -1.52
SGMS1-211ENST00000626236 ZNF561-AS1K7EIQ3 104 aa5.58□□□□□ -1.52
SGMS1-211ENST00000626236 SPAG11BQ08648 103 aa5.58□□□□□ -1.52
SGMS1-211ENST00000626236 LINC00526Q96FQ7 95 aa5.58□□□□□ -1.52
SGMS1-211ENST00000626236 TOMM7Q9P0U1 55 aa5.58□□□□□ -1.52
SGMS1-211ENST00000626236 TMEM223A0PJW6 202 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms