RNA–Protein interactions for RNA: ENST00000625668.2

LINC02028-223, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 646 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-223	ENST00000625668	TRAV8-4	A0A0B4J246	113 aa		4.46	□□□□□ -1.7
LINC02028-223	ENST00000625668	LOC389332	A0A1B0GUA5	103 aa		4.46	□□□□□ -1.7
LINC02028-223	ENST00000625668	RPL39	P62891	51 aa	Known RBP	4.46	□□□□□ -1.7
LINC02028-223	ENST00000625668	KIAA1644	Q3SXP7	199 aa		4.46	□□□□□ -1.7
LINC02028-223	ENST00000625668	KRTAP26-1	Q6PEX3	210 aa		4.46	□□□□□ -1.7
LINC02028-223	ENST00000625668	MAP1LC3A	Q9H492	121 aa		4.46	□□□□□ -1.7
LINC02028-223	ENST00000625668	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.45	□□□□□ -1.7
LINC02028-223	ENST00000625668	PRSS47	A8MTI9	375 aa		4.45	□□□□□ -1.7
LINC02028-223	ENST00000625668	USP17L23	D6RBM5	183 aa		4.45	□□□□□ -1.7
LINC02028-223	ENST00000625668	MT-ND6	P03923	174 aa		4.45	□□□□□ -1.7
LINC02028-223	ENST00000625668	RAB5A	P20339	215 aa		4.45	□□□□□ -1.7
LINC02028-223	ENST00000625668	COX19	Q49B96	90 aa		4.45	□□□□□ -1.7
LINC02028-223	ENST00000625668	RNASE13	Q5GAN3	156 aa	Known RBP	4.45	□□□□□ -1.7
LINC02028-223	ENST00000625668	DGAT2L7P	Q6IED9	249 aa		4.45	□□□□□ -1.7
LINC02028-223	ENST00000625668		Q6ZUT4	128 aa		4.45	□□□□□ -1.7
LINC02028-223	ENST00000625668	ZNF664	Q8N3J9	261 aa		4.45	□□□□□ -1.7
LINC02028-223	ENST00000625668		Q8N8P6	123 aa		4.45	□□□□□ -1.7
LINC02028-223	ENST00000625668	CDC42SE2	Q9NRR3	84 aa		4.45	□□□□□ -1.7
LINC02028-223	ENST00000625668	XCL1	P47992	114 aa		4.44	□□□□□ -1.7
LINC02028-223	ENST00000625668	SMAGP	Q0VAQ4	97 aa		4.44	□□□□□ -1.7
LINC02028-223	ENST00000625668	CBLN2	Q8IUK8	224 aa		4.44	□□□□□ -1.7
LINC02028-223	ENST00000625668	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.44	□□□□□ -1.7
LINC02028-223	ENST00000625668	TMEM18	Q96B42	140 aa		4.44	□□□□□ -1.7
LINC02028-223	ENST00000625668	YPEL4	Q96NS1	127 aa		4.44	□□□□□ -1.7
LINC02028-223	ENST00000625668	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.44	□□□□□ -1.7
LINC02028-223	ENST00000625668	TIMM21	Q9BVV7	248 aa		4.44	□□□□□ -1.7
LINC02028-223	ENST00000625668	CSDC2	Q9Y534	153 aa	Known RBP	4.44	□□□□□ -1.7
LINC02028-223	ENST00000625668	LINC00959	A0A1B0GUT2	108 aa		4.43	□□□□□ -1.7
LINC02028-223	ENST00000625668	CCL25	O15444	150 aa		4.43	□□□□□ -1.7
LINC02028-223	ENST00000625668	PRSS1	P07477	247 aa		4.43	□□□□□ -1.7
LINC02028-223	ENST00000625668	IFI27	P40305	119 aa	Predicted RBP	4.43	□□□□□ -1.7
LINC02028-223	ENST00000625668	KRTAP10-1	P60331	282 aa		4.43	□□□□□ -1.7
LINC02028-223	ENST00000625668	FABP9	Q0Z7S8	132 aa		4.43	□□□□□ -1.7
LINC02028-223	ENST00000625668	ORMDL2	Q53FV1	153 aa		4.43	□□□□□ -1.7
LINC02028-223	ENST00000625668	FAM104A	Q969W3	186 aa		4.43	□□□□□ -1.7
LINC02028-223	ENST00000625668	OPRPN	Q99935	248 aa	Predicted RBP	4.43	□□□□□ -1.7
LINC02028-223	ENST00000625668	NXT2	Q9NPJ8	142 aa	Known RBP	4.43	□□□□□ -1.7
LINC02028-223	ENST00000625668	SPANXA1	Q9NS26	97 aa		4.43	□□□□□ -1.7
LINC02028-223	ENST00000625668	TRAV13-1	A0A0B4J241	112 aa		4.42	□□□□□ -1.7
LINC02028-223	ENST00000625668		K7EMI3	77 aa		4.42	□□□□□ -1.7
LINC02028-223	ENST00000625668	CDK2AP2	O75956	126 aa		4.42	□□□□□ -1.7
LINC02028-223	ENST00000625668	SS18	Q15532	418 aa		4.42	□□□□□ -1.7
LINC02028-223	ENST00000625668	LINC01620	Q4KN68	170 aa		4.42	□□□□□ -1.7
LINC02028-223	ENST00000625668	C14orf177	Q52M58	125 aa		4.42	□□□□□ -1.7
LINC02028-223	ENST00000625668	C2orf66	Q6UXQ4	117 aa		4.42	□□□□□ -1.7
LINC02028-223	ENST00000625668	C15orf56	Q8N910	161 aa		4.42	□□□□□ -1.7
LINC02028-223	ENST00000625668	CYSLTR1	Q9Y271	337 aa		4.42	□□□□□ -1.7
LINC02028-223	ENST00000625668	TRAPPC1	Q9Y5R8	145 aa		4.42	□□□□□ -1.7
LINC02028-223	ENST00000625668	APOB	P04114	4563 aa	Known RBP	4.42	□□□□□ -1.7
LINC02028-223	ENST00000625668	IGLV4-3	A0A075B6K6	122 aa		4.41	□□□□□ -1.7
LINC02028-223	ENST00000625668	hDV102S1	A0JD36	115 aa		4.41	□□□□□ -1.7
LINC02028-223	ENST00000625668	C1orf196	B1AJZ1	125 aa		4.41	□□□□□ -1.7
LINC02028-223	ENST00000625668	MRPS36	P82909	103 aa	Known RBP	4.41	□□□□□ -1.7
LINC02028-223	ENST00000625668	SMCO4	Q9NRQ5	59 aa		4.41	□□□□□ -1.7
LINC02028-223	ENST00000625668	PYGO1	Q9Y3Y4	419 aa		4.41	□□□□□ -1.7
LINC02028-223	ENST00000625668	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.4	□□□□□ -1.71
LINC02028-223	ENST00000625668	HAMP	P81172	84 aa		4.4	□□□□□ -1.71
LINC02028-223	ENST00000625668	HIGD2B	Q4VC39	106 aa		4.4	□□□□□ -1.71
LINC02028-223	ENST00000625668	CD164L2	Q6UWJ8	174 aa		4.4	□□□□□ -1.71
LINC02028-223	ENST00000625668	C18orf32	Q8TCD1	76 aa		4.4	□□□□□ -1.71
LINC02028-223	ENST00000625668	SRRM2	Q9UQ35	2752 aa	Known RBP	4.4	□□□□□ -1.71
LINC02028-223	ENST00000625668	HMCN2	Q8NDA2	5059 aa		4.4	□□□□□ -1.71
LINC02028-223	ENST00000625668	DNAH5	Q8TE73	4624 aa		4.39	□□□□□ -1.71
LINC02028-223	ENST00000625668		A0A087WYN8	130 aa		4.39	□□□□□ -1.71
LINC02028-223	ENST00000625668	LINC01546	A6NGU7	62 aa		4.39	□□□□□ -1.71
LINC02028-223	ENST00000625668	IGIP	A6NJ69	53 aa		4.39	□□□□□ -1.71
LINC02028-223	ENST00000625668	COX7A2L	O14548	114 aa		4.39	□□□□□ -1.71
LINC02028-223	ENST00000625668	CNBP	P62633	177 aa	Known RBP	4.39	□□□□□ -1.71
LINC02028-223	ENST00000625668	ZC2HC1B	Q5TFG8	222 aa		4.39	□□□□□ -1.71
LINC02028-223	ENST00000625668	CFAP161	Q6P656	301 aa		4.39	□□□□□ -1.71
LINC02028-223	ENST00000625668		Q6ZN92	141 aa		4.39	□□□□□ -1.71
LINC02028-223	ENST00000625668	TEX43	Q6ZNM6	134 aa		4.39	□□□□□ -1.71
LINC02028-223	ENST00000625668	LINC00173	Q6ZV60	143 aa		4.39	□□□□□ -1.71
LINC02028-223	ENST00000625668	FA2H	Q7L5A8	372 aa		4.39	□□□□□ -1.71
LINC02028-223	ENST00000625668	TOMM6	Q96B49	74 aa		4.39	□□□□□ -1.71
LINC02028-223	ENST00000625668	URB1-AS1	Q96HZ7	61 aa		4.39	□□□□□ -1.71
LINC02028-223	ENST00000625668	TMEM141	Q96I45	108 aa		4.39	□□□□□ -1.71
LINC02028-223	ENST00000625668	MYCBP2	O75592	4640 aa		4.39	□□□□□ -1.71
LINC02028-223	ENST00000625668	LRP1B	Q9NZR2	4599 aa		4.38	□□□□□ -1.71
LINC02028-223	ENST00000625668	IGHV1-58	A0A0C4DH39	117 aa		4.38	□□□□□ -1.71
LINC02028-223	ENST00000625668	SCO1	O75880	301 aa		4.38	□□□□□ -1.71
LINC02028-223	ENST00000625668	XG	P55808	180 aa		4.38	□□□□□ -1.71
LINC02028-223	ENST00000625668	C5orf38	Q86SI9	138 aa		4.38	□□□□□ -1.71
LINC02028-223	ENST00000625668	SCGB3A1	Q96QR1	104 aa		4.38	□□□□□ -1.71
LINC02028-223	ENST00000625668	TIMM17A	Q99595	171 aa		4.38	□□□□□ -1.71
LINC02028-223	ENST00000625668	C2orf88	Q9BSF0	95 aa		4.38	□□□□□ -1.71
LINC02028-223	ENST00000625668		A0A096LNJ9	63 aa		4.37	□□□□□ -1.71
LINC02028-223	ENST00000625668	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.37	□□□□□ -1.71
LINC02028-223	ENST00000625668	COLCA2	A8K830	154 aa		4.37	□□□□□ -1.71
LINC02028-223	ENST00000625668	LINC00614	P0C842	121 aa		4.37	□□□□□ -1.71
LINC02028-223	ENST00000625668	G0S2	P27469	103 aa		4.37	□□□□□ -1.71
LINC02028-223	ENST00000625668	UBE2D1	P51668	147 aa		4.37	□□□□□ -1.71
LINC02028-223	ENST00000625668	PMCHL1	Q16048	86 aa		4.37	□□□□□ -1.71
LINC02028-223	ENST00000625668	LINC00242	Q5T6M2	205 aa		4.37	□□□□□ -1.71
LINC02028-223	ENST00000625668	KRTAP5-4	Q6L8H1	288 aa		4.37	□□□□□ -1.71
LINC02028-223	ENST00000625668		Q6ZSA8	131 aa		4.37	□□□□□ -1.71
LINC02028-223	ENST00000625668	ERAS	Q7Z444	233 aa		4.37	□□□□□ -1.71
LINC02028-223	ENST00000625668	C9orf163	Q8N9P6	203 aa		4.37	□□□□□ -1.71
LINC02028-223	ENST00000625668	LINC00526	Q96FQ7	95 aa		4.37	□□□□□ -1.71
LINC02028-223	ENST00000625668	AMELX	Q99217	191 aa		4.37	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms