RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 KIR2DL4Q99706 377 aa6.58□□□□□ -1.36
DDX41-218ENST00000625286 GAGE2DQ9UEU5 116 aa6.58□□□□□ -1.36
DDX41-218ENST00000625286 TRBV24-1A0A075B6N3 115 aa6.57□□□□□ -1.36
DDX41-218ENST00000625286 C9orf129Q5T035 196 aaKnown RBP6.57□□□□□ -1.36
DDX41-218ENST00000625286 LCE2AQ5TA79 106 aaPredicted RBP6.57□□□□□ -1.36
DDX41-218ENST00000625286 IMMP2LQ96T52 175 aa6.57□□□□□ -1.36
DDX41-218ENST00000625286 SMIM7Q9BQ49 75 aa6.57□□□□□ -1.36
DDX41-218ENST00000625286 SMDT1Q9H4I9 107 aa6.57□□□□□ -1.36
DDX41-218ENST00000625286 F8WDY8 70 aa6.56□□□□□ -1.36
DDX41-218ENST00000625286 NDUFA1O15239 70 aa6.56□□□□□ -1.36
DDX41-218ENST00000625286 SRP19P09132 144 aaKnown RBP6.56□□□□□ -1.36
DDX41-218ENST00000625286 RIGQ13278 110 aa6.56□□□□□ -1.36
DDX41-218ENST00000625286 TMEM241Q24JQ0 296 aa6.56□□□□□ -1.36
DDX41-218ENST00000625286 ZNF727A8MUV8 499 aa6.55□□□□□ -1.36
DDX41-218ENST00000625286 RPL32P62910 135 aaKnown RBP6.55□□□□□ -1.36
DDX41-218ENST00000625286 BLOC1S1P78537 153 aa6.55□□□□□ -1.36
DDX41-218ENST00000625286 C2orf82Q6UX34 121 aa6.55□□□□□ -1.36
DDX41-218ENST00000625286 C20orf78Q9BR46 151 aa6.55□□□□□ -1.36
DDX41-218ENST00000625286 M0QXV9 152 aa6.54□□□□□ -1.36
DDX41-218ENST00000625286 PPP1R2P9O14990 202 aa6.54□□□□□ -1.36
DDX41-218ENST00000625286 TCAPO15273 167 aa6.54□□□□□ -1.36
DDX41-218ENST00000625286 TNFRSF6BO95407 300 aa6.54□□□□□ -1.36
DDX41-218ENST00000625286 PPP1R17O96001 155 aa6.54□□□□□ -1.36
DDX41-218ENST00000625286 MRPS36P82909 103 aaKnown RBP6.54□□□□□ -1.36
DDX41-218ENST00000625286 SMAGPQ0VAQ4 97 aa6.54□□□□□ -1.36
DDX41-218ENST00000625286 LINC00242Q5T6M2 205 aa6.54□□□□□ -1.36
DDX41-218ENST00000625286 MUC17Q685J3 4493 aa6.54□□□□□ -1.36
DDX41-218ENST00000625286 SMIM27A0A1W2PRY6 76 aa6.53□□□□□ -1.36
DDX41-218ENST00000625286 LINC00862A6NCI5 91 aa6.53□□□□□ -1.36
DDX41-218ENST00000625286 C9JQL5 133 aa6.53□□□□□ -1.36
DDX41-218ENST00000625286 NPYP01303 97 aa6.53□□□□□ -1.36
DDX41-218ENST00000625286 RPL23P62829 140 aaKnown RBP6.53□□□□□ -1.36
DDX41-218ENST00000625286 FAM74A3Q4VXF1 159 aa6.53□□□□□ -1.36
DDX41-218ENST00000625286 TMEM18Q96B42 140 aa6.53□□□□□ -1.36
DDX41-218ENST00000625286 SMIM2Q9BVW6 85 aa6.53□□□□□ -1.36
DDX41-218ENST00000625286 EIF5A2Q9GZV4 153 aaKnown RBP6.53□□□□□ -1.36
DDX41-218ENST00000625286 SPANXA1Q9NS26 97 aa6.53□□□□□ -1.36
DDX41-218ENST00000625286 NAT8BQ9UHF3 227 aa6.53□□□□□ -1.36
DDX41-218ENST00000625286 IFITM10A6NMD0 228 aa6.52□□□□□ -1.37
DDX41-218ENST00000625286 D6R8Y8 96 aa6.52□□□□□ -1.37
DDX41-218ENST00000625286 TSPAN13O95857 204 aa6.52□□□□□ -1.37
DDX41-218ENST00000625286 CKS2P33552 79 aa6.52□□□□□ -1.37
DDX41-218ENST00000625286 UBE2BP63146 152 aa6.52□□□□□ -1.37
DDX41-218ENST00000625286 HBBP68871 147 aa6.52□□□□□ -1.37
DDX41-218ENST00000625286 A0A087X002 238 aa6.51□□□□□ -1.37
DDX41-218ENST00000625286 NDUFC2-KCTD14E9PQ53 114 aa6.51□□□□□ -1.37
DDX41-218ENST00000625286 ZNF861PO60384 105 aa6.51□□□□□ -1.37
DDX41-218ENST00000625286 UBE2D1P51668 147 aa6.51□□□□□ -1.37
DDX41-218ENST00000625286 ZC2HC1BQ5TFG8 222 aa6.51□□□□□ -1.37
DDX41-218ENST00000625286 CARHSP1Q9Y2V2 147 aaKnown RBP6.51□□□□□ -1.37
DDX41-218ENST00000625286 IGLV4-3A0A075B6K6 122 aa6.5□□□□□ -1.37
DDX41-218ENST00000625286 TRBV30A0A0K0K1B3 111 aa6.5□□□□□ -1.37
DDX41-218ENST00000625286 RPL13AP40429 203 aaKnown RBP6.5□□□□□ -1.37
DDX41-218ENST00000625286 A0A1B0GXF2 115 aa6.49□□□□□ -1.37
DDX41-218ENST00000625286 SRSF3P84103 164 aaKnown RBP6.49□□□□□ -1.37
DDX41-218ENST00000625286 LINC00469Q8N7U9 141 aa6.49□□□□□ -1.37
DDX41-218ENST00000625286 C22orf24Q9Y442 160 aa6.49□□□□□ -1.37
DDX41-218ENST00000625286 TGIF2-C20orf24A0A0A6YYL0 155 aa6.48□□□□□ -1.37
DDX41-218ENST00000625286 ADIRFQ15847 76 aa6.48□□□□□ -1.37
DDX41-218ENST00000625286 MRPL54Q6P161 138 aaKnown RBP6.48□□□□□ -1.37
DDX41-218ENST00000625286 LINC00173Q6ZV60 143 aa6.48□□□□□ -1.37
DDX41-218ENST00000625286 CTDSP1Q9GZU7 261 aa6.48□□□□□ -1.37
DDX41-218ENST00000625286 ANAPC11Q9NYG5 84 aa6.48□□□□□ -1.37
DDX41-218ENST00000625286 PYGO1Q9Y3Y4 419 aa6.48□□□□□ -1.37
DDX41-218ENST00000625286 XAGE1AQ9HD64 81 aa6.47□□□□□ -1.37
DDX41-218ENST00000625286 A0A1B0GW15 77 aa6.46□□□□□ -1.38
DDX41-218ENST00000625286 TMEM141Q96I45 108 aa6.46□□□□□ -1.38
DDX41-218ENST00000625286 IFI27P40305 119 aaPredicted RBP6.45□□□□□ -1.38
DDX41-218ENST00000625286 KRTAP13-2Q52LG2 175 aa6.45□□□□□ -1.38
DDX41-218ENST00000625286 TMEM136Q6ZRR5 245 aa6.45□□□□□ -1.38
DDX41-218ENST00000625286 LINC01561Q8N1V8 128 aa6.45□□□□□ -1.38
DDX41-218ENST00000625286 PACRGQ96M98 296 aaPredicted RBP6.45□□□□□ -1.38
DDX41-218ENST00000625286 AMELXQ99217 191 aa6.45□□□□□ -1.38
DDX41-218ENST00000625286 NAT8Q9UHE5 227 aa6.45□□□□□ -1.38
DDX41-218ENST00000625286 A0A0U1RQV1 116 aa6.44□□□□□ -1.38
DDX41-218ENST00000625286 PRSS47A8MTI9 375 aa6.44□□□□□ -1.38
DDX41-218ENST00000625286 NUPR1O60356 82 aa6.44□□□□□ -1.38
DDX41-218ENST00000625286 AKAP14Q86UN6 197 aa6.44□□□□□ -1.38
DDX41-218ENST00000625286 PRELID3AQ96N28 172 aa6.44□□□□□ -1.38
DDX41-218ENST00000625286 RETNLBQ9BQ08 111 aa6.44□□□□□ -1.38
DDX41-218ENST00000625286 LOC389332A0A1B0GUA5 103 aa6.43□□□□□ -1.38
DDX41-218ENST00000625286 F8W036 122 aa6.43□□□□□ -1.38
DDX41-218ENST00000625286 PPBPP02775 128 aa6.43□□□□□ -1.38
DDX41-218ENST00000625286 RAB5AP20339 215 aa6.43□□□□□ -1.38
DDX41-218ENST00000625286 TEX43Q6ZNM6 134 aa6.43□□□□□ -1.38
DDX41-218ENST00000625286 FAM19A3Q7Z5A8 133 aa6.43□□□□□ -1.38
DDX41-218ENST00000625286 ORMDL3Q8N138 153 aa6.43□□□□□ -1.38
DDX41-218ENST00000625286 TOMM7Q9P0U1 55 aa6.43□□□□□ -1.38
DDX41-218ENST00000625286 hCG_2014768A0A024R1R8 64 aa6.42□□□□□ -1.38
DDX41-218ENST00000625286 IGIPA6NJ69 53 aa6.42□□□□□ -1.38
DDX41-218ENST00000625286 RPL37AP8A6NKH3 93 aa6.42□□□□□ -1.38
DDX41-218ENST00000625286 BCE1O60756 84 aa6.42□□□□□ -1.38
DDX41-218ENST00000625286 C2orf66Q6UXQ4 117 aa6.42□□□□□ -1.38
DDX41-218ENST00000625286 Q6ZN92 141 aa6.42□□□□□ -1.38
DDX41-218ENST00000625286 KRTAP13-1Q8IUC0 172 aa6.42□□□□□ -1.38
DDX41-218ENST00000625286 Q8IZM0 81 aa6.42□□□□□ -1.38
DDX41-218ENST00000625286 TYMSOSQ8TAI1 123 aa6.42□□□□□ -1.38
DDX41-218ENST00000625286 LINC00167Q96N53 147 aa6.42□□□□□ -1.38
DDX41-218ENST00000625286 CRYGAP11844 174 aa6.41□□□□□ -1.38
DDX41-218ENST00000625286 CKS1BP61024 79 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms