RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 FAM222AQ5U5X8 452 aa13.83□□□□□ -0.19
PCDHB11-202ENST00000624887 PRIMA1Q86XR5 153 aa13.83□□□□□ -0.19
PCDHB11-202ENST00000624887 NDUFA1O15239 70 aa13.82□□□□□ -0.2
PCDHB11-202ENST00000624887 GAGE6Q13070 117 aa13.82□□□□□ -0.2
PCDHB11-202ENST00000624887 SPANXDQ9BXN6 97 aa13.82□□□□□ -0.2
PCDHB11-202ENST00000624887 SPANXCQ9NY87 97 aa13.82□□□□□ -0.2
PCDHB11-202ENST00000624887 ETDBQ3ZM63 59 aa13.82□□□□□ -0.2
PCDHB11-202ENST00000624887 PRO0255Q9UI72 69 aa13.82□□□□□ -0.2
PCDHB11-202ENST00000624887 SMIM1B2RUZ4 78 aa13.81□□□□□ -0.2
PCDHB11-202ENST00000624887 GYPEP15421 78 aa13.81□□□□□ -0.2
PCDHB11-202ENST00000624887 PRO1854Q9UHT4 67 aa13.81□□□□□ -0.2
PCDHB11-202ENST00000624887 NBEAL2Q6ZNJ1 2754 aa13.8□□□□□ -0.2
PCDHB11-202ENST00000624887 A0A1B0GV72 72 aa13.8□□□□□ -0.2
PCDHB11-202ENST00000624887 TIMM17BO60830 172 aa13.8□□□□□ -0.2
PCDHB11-202ENST00000624887 ADAMTSL4-AS1Q5T5F5 129 aa13.8□□□□□ -0.2
PCDHB11-202ENST00000624887 CHCHD5Q9BSY4 110 aa13.8□□□□□ -0.2
PCDHB11-202ENST00000624887 TRRAPQ9Y4A5 3859 aa13.79□□□□□ -0.2
PCDHB11-202ENST00000624887 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.79□□□□□ -0.2
PCDHB11-202ENST00000624887 A0A0B4J2C4 111 aa13.79□□□□□ -0.2
PCDHB11-202ENST00000624887 F5H768 121 aa13.79□□□□□ -0.2
PCDHB11-202ENST00000624887 SH2D6Q7Z4S9 175 aa13.79□□□□□ -0.2
PCDHB11-202ENST00000624887 IGHV4-28A0A0C4DH34 117 aa13.78□□□□□ -0.2
PCDHB11-202ENST00000624887 EIF4EBP3O60516 100 aaPredicted RBP13.78□□□□□ -0.2
PCDHB11-202ENST00000624887 MIAQ16674 131 aa13.78□□□□□ -0.2
PCDHB11-202ENST00000624887 IGLV4-60A0A075B6I1 120 aa13.78□□□□□ -0.2
PCDHB11-202ENST00000624887 PRSS2P07478 247 aa13.77□□□□□ -0.21
PCDHB11-202ENST00000624887 DEFB4AO15263 64 aa13.76□□□□□ -0.21
PCDHB11-202ENST00000624887 IGHV4-30-4P0DP06 118 aa13.76□□□□□ -0.21
PCDHB11-202ENST00000624887 MIFP14174 115 aa13.76□□□□□ -0.21
PCDHB11-202ENST00000624887 C3orf56Q8N813 242 aa13.76□□□□□ -0.21
PCDHB11-202ENST00000624887 LOC107984156A0A0G2JMH3 177 aa13.76□□□□□ -0.21
PCDHB11-202ENST00000624887 ARL17AQ8IVW1 177 aa13.76□□□□□ -0.21
PCDHB11-202ENST00000624887 Q8NAQ8 132 aa13.76□□□□□ -0.21
PCDHB11-202ENST00000624887 Q9H8V8 135 aa13.76□□□□□ -0.21
PCDHB11-202ENST00000624887 LYRM7Q5U5X0 104 aa13.75□□□□□ -0.21
PCDHB11-202ENST00000624887 PAX4O43316 350 aa13.74□□□□□ -0.21
PCDHB11-202ENST00000624887 IGHV3-33P01772 117 aa13.74□□□□□ -0.21
PCDHB11-202ENST00000624887 FOXI1Q12951 378 aa13.74□□□□□ -0.21
PCDHB11-202ENST00000624887 SFTA2Q6UW10 78 aa13.74□□□□□ -0.21
PCDHB11-202ENST00000624887 SHISA2Q6UWI4 295 aa13.74□□□□□ -0.21
PCDHB11-202ENST00000624887 RNF183Q96D59 192 aa13.74□□□□□ -0.21
PCDHB11-202ENST00000624887 FBN1P35555 2871 aaKnown RBP13.73□□□□□ -0.21
PCDHB11-202ENST00000624887 IFITM1P13164 125 aa13.73□□□□□ -0.21
PCDHB11-202ENST00000624887 DAD1P61803 113 aa13.73□□□□□ -0.21
PCDHB11-202ENST00000624887 CIRBPQ14011 172 aaKnown RBP13.73□□□□□ -0.21
PCDHB11-202ENST00000624887 ZNF625Q96I27 306 aaPredicted RBP13.72□□□□□ -0.21
PCDHB11-202ENST00000624887 SMCPP49901 116 aaPredicted RBP13.72□□□□□ -0.21
PCDHB11-202ENST00000624887 ERG28Q9UKR5 140 aa13.72□□□□□ -0.21
PCDHB11-202ENST00000624887 IGKV3OR2-268A0A0C4DH90 116 aa13.71□□□□□ -0.22
PCDHB11-202ENST00000624887 A0A1B0GUV1 79 aa13.71□□□□□ -0.22
PCDHB11-202ENST00000624887 CELA1Q9UNI1 258 aa13.71□□□□□ -0.22
PCDHB11-202ENST00000624887 TRBV20-1A0A075B6N2 111 aa13.69□□□□□ -0.22
PCDHB11-202ENST00000624887 IGHV3OR16-9A0A0B4J2B5 98 aa13.69□□□□□ -0.22
PCDHB11-202ENST00000624887 PSMB2P49721 201 aa13.69□□□□□ -0.22
PCDHB11-202ENST00000624887 HERV-K104P63124 156 aa13.69□□□□□ -0.22
PCDHB11-202ENST00000624887 ATP5G1P05496 136 aa13.69□□□□□ -0.22
PCDHB11-202ENST00000624887 SPART-AS1P0CW21 52 aa13.69□□□□□ -0.22
PCDHB11-202ENST00000624887 NPC2P61916 151 aa13.69□□□□□ -0.22
PCDHB11-202ENST00000624887 A0A096LPF7 62 aa13.68□□□□□ -0.22
PCDHB11-202ENST00000624887 DAND5Q8N907 189 aa13.68□□□□□ -0.22
PCDHB11-202ENST00000624887 CDIP1Q9H305 208 aa13.68□□□□□ -0.22
PCDHB11-202ENST00000624887 TMEM262E9PQX1 116 aa13.67□□□□□ -0.22
PCDHB11-202ENST00000624887 OXLD1Q5BKU9 147 aa13.67□□□□□ -0.22
PCDHB11-202ENST00000624887 MTURNQ8N3F0 131 aa13.67□□□□□ -0.22
PCDHB11-202ENST00000624887 LINC00959A0A1B0GUT2 108 aa13.67□□□□□ -0.22
PCDHB11-202ENST00000624887 TCL1BO95988 128 aa13.67□□□□□ -0.22
PCDHB11-202ENST00000624887 H7C2G1 150 aa13.66□□□□□ -0.22
PCDHB11-202ENST00000624887 SCGB1C2P0DMR2 95 aa13.66□□□□□ -0.22
PCDHB11-202ENST00000624887 PPDPFLQ8WWR9 84 aa13.66□□□□□ -0.22
PCDHB11-202ENST00000624887 A0A087WZ39 114 aa13.65□□□□□ -0.22
PCDHB11-202ENST00000624887 M0QXV9 152 aa13.65□□□□□ -0.22
PCDHB11-202ENST00000624887 CKS1BP61024 79 aa13.65□□□□□ -0.22
PCDHB11-202ENST00000624887 TEN1Q86WV5 123 aa13.65□□□□□ -0.22
PCDHB11-202ENST00000624887 LINC00308Q8TCZ7 52 aa13.65□□□□□ -0.22
PCDHB11-202ENST00000624887 COX7B2Q8TF08 81 aa13.65□□□□□ -0.22
PCDHB11-202ENST00000624887 TRAV26-1A0A087WT03 109 aa13.65□□□□□ -0.22
PCDHB11-202ENST00000624887 KRTAP10-11P60412 298 aa13.64□□□□□ -0.23
PCDHB11-202ENST00000624887 Q1RN00 199 aa13.64□□□□□ -0.23
PCDHB11-202ENST00000624887 MEIG1Q5JSS6 88 aa13.64□□□□□ -0.23
PCDHB11-202ENST00000624887 COPS9Q8WXC6 57 aa13.63□□□□□ -0.23
PCDHB11-202ENST00000624887 TRBV30A0A0K0K1B3 111 aa13.62□□□□□ -0.23
PCDHB11-202ENST00000624887 A0A0U1RRA0 63 aa13.62□□□□□ -0.23
PCDHB11-202ENST00000624887 EGFEM1PQ0D2K5 195 aa13.62□□□□□ -0.23
PCDHB11-202ENST00000624887 SS18Q15532 418 aa13.61□□□□□ -0.23
PCDHB11-202ENST00000624887 C5orf38Q86SI9 138 aa13.61□□□□□ -0.23
PCDHB11-202ENST00000624887 TOMM7Q9P0U1 55 aa13.61□□□□□ -0.23
PCDHB11-202ENST00000624887 CARD19Q96LW7 228 aa13.6□□□□□ -0.23
PCDHB11-202ENST00000624887 PPDPFQ9H3Y8 114 aa13.6□□□□□ -0.23
PCDHB11-202ENST00000624887 MAST4O15021 2626 aa13.6□□□□□ -0.23
PCDHB11-202ENST00000624887 MRPL23Q16540 153 aaKnown RBP13.6□□□□□ -0.23
PCDHB11-202ENST00000624887 SOSTDC1Q6X4U4 206 aa13.6□□□□□ -0.23
PCDHB11-202ENST00000624887 TRIAP1O43715 76 aa13.59□□□□□ -0.23
PCDHB11-202ENST00000624887 HTN3P15516 51 aa13.59□□□□□ -0.23
PCDHB11-202ENST00000624887 ICOSQ9Y6W8 199 aa13.58□□□□□ -0.24
PCDHB11-202ENST00000624887 XCL1P47992 114 aa13.58□□□□□ -0.24
PCDHB11-202ENST00000624887 LINC01600Q96MT4 127 aa13.57□□□□□ -0.24
PCDHB11-202ENST00000624887 RPL13AP40429 203 aaKnown RBP13.56□□□□□ -0.24
PCDHB11-202ENST00000624887 CLPSL2Q6UWE3 100 aa13.56□□□□□ -0.24
PCDHB11-202ENST00000624887 XGP55808 180 aa13.56□□□□□ -0.24
PCDHB11-202ENST00000624887 LINC01561Q8N1V8 128 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 834.1 ms