RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 PYY3Q5JQD4 70 aa4.66□□□□□ -1.66
CDKL5-205ENST00000623535 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.66□□□□□ -1.66
CDKL5-205ENST00000623535 DKK2Q9UBU2 259 aa4.66□□□□□ -1.66
CDKL5-205ENST00000623535 UBE2V1Q13404 147 aa4.66□□□□□ -1.66
CDKL5-205ENST00000623535 Q6ZUT4 128 aa4.66□□□□□ -1.66
CDKL5-205ENST00000623535 NUPR1O60356 82 aa4.66□□□□□ -1.66
CDKL5-205ENST00000623535 UNQ9165/PRO28630Q6UXU0 137 aa4.66□□□□□ -1.66
CDKL5-205ENST00000623535 NOTCH4Q99466 2003 aa4.66□□□□□ -1.66
CDKL5-205ENST00000623535 ZNF726P1Q15940 193 aa4.66□□□□□ -1.66
CDKL5-205ENST00000623535 C12orf74Q32Q52 190 aa4.65□□□□□ -1.66
CDKL5-205ENST00000623535 SPINK1P00995 79 aa4.65□□□□□ -1.66
CDKL5-205ENST00000623535 TEN1Q86WV5 123 aa4.65□□□□□ -1.66
CDKL5-205ENST00000623535 EML5Q05BV3 1969 aa4.65□□□□□ -1.66
CDKL5-205ENST00000623535 FAM240AA0A1B0GVK7 77 aa4.65□□□□□ -1.66
CDKL5-205ENST00000623535 IGLV1-47P01700 117 aa4.65□□□□□ -1.67
CDKL5-205ENST00000623535 CLEC2BQ92478 149 aa4.64□□□□□ -1.67
CDKL5-205ENST00000623535 RBM12B-AS1Q9P1G2 102 aa4.64□□□□□ -1.67
CDKL5-205ENST00000623535 COL5A1P20908 1838 aaPredicted RBP4.64□□□□□ -1.67
CDKL5-205ENST00000623535 FHL3Q13643 280 aa4.64□□□□□ -1.67
CDKL5-205ENST00000623535 CFAP126Q5VTH2 177 aa4.64□□□□□ -1.67
CDKL5-205ENST00000623535 SMR3AQ99954 134 aa4.64□□□□□ -1.67
CDKL5-205ENST00000623535 A0A1W2PPM0 123 aa4.64□□□□□ -1.67
CDKL5-205ENST00000623535 MPLKIPQ8TAP9 179 aa4.64□□□□□ -1.67
CDKL5-205ENST00000623535 SPACA4Q8TDM5 124 aa4.64□□□□□ -1.67
CDKL5-205ENST00000623535 C11orf71Q6IPW1 123 aa4.64□□□□□ -1.67
CDKL5-205ENST00000623535 PYGO1Q9Y3Y4 419 aa4.64□□□□□ -1.67
CDKL5-205ENST00000623535 RPL39P62891 51 aaKnown RBP4.64□□□□□ -1.67
CDKL5-205ENST00000623535 C7orf65Q6ZTY9 151 aa4.64□□□□□ -1.67
CDKL5-205ENST00000623535 Q9BRP9 147 aa4.64□□□□□ -1.67
CDKL5-205ENST00000623535 NEXN-AS1Q8NBZ9 246 aa4.63□□□□□ -1.67
CDKL5-205ENST00000623535 K7EP34 96 aa4.63□□□□□ -1.67
CDKL5-205ENST00000623535 ZNF106Q9H2Y7 1883 aaKnown RBP4.63□□□□□ -1.67
CDKL5-205ENST00000623535 Q6ZTC4 211 aa4.63□□□□□ -1.67
CDKL5-205ENST00000623535 IGF2RP11717 2491 aa4.63□□□□□ -1.67
CDKL5-205ENST00000623535 LINC00467Q9BRT7 94 aa4.63□□□□□ -1.67
CDKL5-205ENST00000623535 LINC00575Q6W349 94 aa4.63□□□□□ -1.67
CDKL5-205ENST00000623535 C6orf99Q4VX62 202 aa4.63□□□□□ -1.67
CDKL5-205ENST00000623535 BRI3O95415 125 aa4.63□□□□□ -1.67
CDKL5-205ENST00000623535 Q8IZM0 81 aa4.62□□□□□ -1.67
CDKL5-205ENST00000623535 POLR3KQ9Y2Y1 108 aaPredicted RBP4.62□□□□□ -1.67
CDKL5-205ENST00000623535 KIAA1549LQ6ZVL6 1849 aa4.62□□□□□ -1.67
CDKL5-205ENST00000623535 Q6ZSN1 163 aa4.62□□□□□ -1.67
CDKL5-205ENST00000623535 PKD1L2Q7Z442 2459 aa4.62□□□□□ -1.67
CDKL5-205ENST00000623535 SDIM1Q6ZPB5 146 aa4.62□□□□□ -1.67
CDKL5-205ENST00000623535 IGKV2D-30A0A075B6S6 120 aa4.61□□□□□ -1.67
CDKL5-205ENST00000623535 E9PLD3 99 aa4.61□□□□□ -1.67
CDKL5-205ENST00000623535 NDUFC2-KCTD14E9PQ53 114 aa4.61□□□□□ -1.67
CDKL5-205ENST00000623535 IGKV2-30P06310 120 aa4.61□□□□□ -1.67
CDKL5-205ENST00000623535 M0R2T5 61 aa4.61□□□□□ -1.67
CDKL5-205ENST00000623535 POLQO75417 2590 aa4.61□□□□□ -1.67
CDKL5-205ENST00000623535 COL4A6Q14031 1691 aa4.61□□□□□ -1.67
CDKL5-205ENST00000623535 K7EN84 100 aa4.61□□□□□ -1.67
CDKL5-205ENST00000623535 RETNLBQ9BQ08 111 aa4.61□□□□□ -1.67
CDKL5-205ENST00000623535 MSMPQ1L6U9 139 aa4.61□□□□□ -1.67
CDKL5-205ENST00000623535 WFDC10AQ9H1F0 79 aa4.61□□□□□ -1.67
CDKL5-205ENST00000623535 IGLV1-51P01701 117 aa4.61□□□□□ -1.67
CDKL5-205ENST00000623535 COX6A2Q02221 97 aa4.61□□□□□ -1.67
CDKL5-205ENST00000623535 SBSPONQ8IVN8 264 aa4.6□□□□□ -1.67
CDKL5-205ENST00000623535 ZNF503-AS2A6NEH8 195 aa4.6□□□□□ -1.67
CDKL5-205ENST00000623535 SRSF3P84103 164 aaKnown RBP4.6□□□□□ -1.67
CDKL5-205ENST00000623535 PRLHP81277 87 aa4.6□□□□□ -1.67
CDKL5-205ENST00000623535 LINC00959A0A1B0GUT2 108 aa4.6□□□□□ -1.67
CDKL5-205ENST00000623535 NDUFV3P56181 108 aaKnown RBP4.6□□□□□ -1.67
CDKL5-205ENST00000623535 C11orf53Q8IXP5 236 aa4.6□□□□□ -1.67
CDKL5-205ENST00000623535 ZNF581Q9P0T4 197 aa4.6□□□□□ -1.67
CDKL5-205ENST00000623535 CYSRT1A8MQ03 144 aa4.59□□□□□ -1.67
CDKL5-205ENST00000623535 LINC00643Q86TS7 51 aa4.59□□□□□ -1.67
CDKL5-205ENST00000623535 CYYR1Q96J86 154 aa4.59□□□□□ -1.67
CDKL5-205ENST00000623535 SPAG11AQ6PDA7 123 aa4.59□□□□□ -1.67
CDKL5-205ENST00000623535 C22orf34Q6ZV56 151 aa4.59□□□□□ -1.67
CDKL5-205ENST00000623535 ANKRD17O75179 2603 aaKnown RBP4.59□□□□□ -1.68
CDKL5-205ENST00000623535 RTL8CO15255 209 aa4.59□□□□□ -1.68
CDKL5-205ENST00000623535 Q6ZQY7 126 aa4.59□□□□□ -1.68
CDKL5-205ENST00000623535 C1orf147Q96MC9 270 aaPredicted RBP4.58□□□□□ -1.68
CDKL5-205ENST00000623535 EPM2AB3EWF7 344 aa4.58□□□□□ -1.68
CDKL5-205ENST00000623535 COL4A4P53420 1690 aaPredicted RBP4.58□□□□□ -1.68
CDKL5-205ENST00000623535 PIEZO2Q9H5I5 2752 aa4.58□□□□□ -1.68
CDKL5-205ENST00000623535 TRBV6-5A0A0K0K1A5 114 aa4.58□□□□□ -1.68
CDKL5-205ENST00000623535 K7ERJ3 54 aa4.58□□□□□ -1.68
CDKL5-205ENST00000623535 TP53AIP1Q9HCN2 124 aa4.58□□□□□ -1.68
CDKL5-205ENST00000623535 CELA1Q9UNI1 258 aa4.58□□□□□ -1.68
CDKL5-205ENST00000623535 PROK1P58294 105 aa4.58□□□□□ -1.68
CDKL5-205ENST00000623535 EBI3Q14213 229 aa4.57□□□□□ -1.68
CDKL5-205ENST00000623535 MRPS36P82909 103 aaKnown RBP4.57□□□□□ -1.68
CDKL5-205ENST00000623535 KIF25-AS1Q9Y6Z4 181 aa4.57□□□□□ -1.68
CDKL5-205ENST00000623535 FAM30AQ9NZY2 134 aa4.57□□□□□ -1.68
CDKL5-205ENST00000623535 NBDYA0A0U1RRE5 68 aa4.57□□□□□ -1.68
CDKL5-205ENST00000623535 SCXQ7RTU7 201 aa4.57□□□□□ -1.68
CDKL5-205ENST00000623535 TIMM17BO60830 172 aa4.57□□□□□ -1.68
CDKL5-205ENST00000623535 ENHOQ6UWT2 76 aa4.56□□□□□ -1.68
CDKL5-205ENST00000623535 ZFAND3Q9H8U3 227 aa4.56□□□□□ -1.68
CDKL5-205ENST00000623535 LTBP2Q14767 1821 aa4.56□□□□□ -1.68
CDKL5-205ENST00000623535 RNASE3P12724 160 aaKnown RBP4.56□□□□□ -1.68
CDKL5-205ENST00000623535 BRWD1-AS2P59051 145 aa4.56□□□□□ -1.68
CDKL5-205ENST00000623535 HIGD1BQ9P298 99 aa4.56□□□□□ -1.68
CDKL5-205ENST00000623535 TP53TG3Q9ULZ0 132 aa4.55□□□□□ -1.68
CDKL5-205ENST00000623535 SPTBN4Q9H254 2564 aa4.55□□□□□ -1.68
CDKL5-205ENST00000623535 SIPA1L1O43166 1804 aa4.55□□□□□ -1.68
CDKL5-205ENST00000623535 CDKN2A-AS1Q9UH64 79 aa4.55□□□□□ -1.68
CDKL5-205ENST00000623535 Q8NBF4 154 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms