RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 KRTAP10-11P60412 298 aa13.09□□□□□ -0.31
PCDHB2-202ENST00000622947 DEFB135Q30KP9 77 aa13.09□□□□□ -0.31
PCDHB2-202ENST00000622947 TRGV2A0A075B6R0 118 aa13.09□□□□□ -0.31
PCDHB2-202ENST00000622947 TRBV10-2A0A0K0K1G8 114 aa13.09□□□□□ -0.31
PCDHB2-202ENST00000622947 PMVKQ15126 192 aa13.09□□□□□ -0.31
PCDHB2-202ENST00000622947 DNAJC30Q96LL9 226 aa13.09□□□□□ -0.31
PCDHB2-202ENST00000622947 CHCHD5Q9BSY4 110 aa13.09□□□□□ -0.31
PCDHB2-202ENST00000622947 DNAH3Q8TD57 4116 aa13.09□□□□□ -0.31
PCDHB2-202ENST00000622947 C5orf47Q569G3 176 aa13.08□□□□□ -0.32
PCDHB2-202ENST00000622947 ZNRF2Q8NHG8 242 aa13.08□□□□□ -0.32
PCDHB2-202ENST00000622947 FAM104AQ969W3 186 aa13.08□□□□□ -0.32
PCDHB2-202ENST00000622947 CHCHD7Q9BUK0 85 aa13.08□□□□□ -0.32
PCDHB2-202ENST00000622947 CSDC2Q9Y534 153 aaKnown RBP13.08□□□□□ -0.32
PCDHB2-202ENST00000622947 IGLV4-69A0A075B6H9 119 aa13.08□□□□□ -0.32
PCDHB2-202ENST00000622947 A0A0B4J2C4 111 aa13.08□□□□□ -0.32
PCDHB2-202ENST00000622947 C11orf86A6NJI1 115 aa13.08□□□□□ -0.32
PCDHB2-202ENST00000622947 IGHV4-30-4P0DP06 118 aa13.08□□□□□ -0.32
PCDHB2-202ENST00000622947 KIR2DL5BQ8NHK3 375 aa13.08□□□□□ -0.32
PCDHB2-202ENST00000622947 K7EQD1 137 aa13.07□□□□□ -0.32
PCDHB2-202ENST00000622947 TRBV7-7A0A0K0K1E9 115 aa13.07□□□□□ -0.32
PCDHB2-202ENST00000622947 A4D1N5 150 aa13.07□□□□□ -0.32
PCDHB2-202ENST00000622947 LOC100131303A0A0U1RQF7 123 aa13.05□□□□□ -0.32
PCDHB2-202ENST00000622947 FAM240AA0A1B0GVK7 77 aa13.05□□□□□ -0.32
PCDHB2-202ENST00000622947 EIF4EBP3O60516 100 aaPredicted RBP13.05□□□□□ -0.32
PCDHB2-202ENST00000622947 CEMP1Q6PRD7 247 aaPredicted RBP13.05□□□□□ -0.32
PCDHB2-202ENST00000622947 TSPEAR-AS2P59090 65 aa13.05□□□□□ -0.32
PCDHB2-202ENST00000622947 LINC00612Q8N6U2 182 aa13.05□□□□□ -0.32
PCDHB2-202ENST00000622947 DEFB130BP0DP73 79 aa13.04□□□□□ -0.32
PCDHB2-202ENST00000622947 DEFB130AP0DP74 79 aa13.04□□□□□ -0.32
PCDHB2-202ENST00000622947 APOC4P55056 127 aa13.04□□□□□ -0.32
PCDHB2-202ENST00000622947 FHL2Q14192 279 aa13.04□□□□□ -0.32
PCDHB2-202ENST00000622947 TRBV10-1A0A0K0K1A3 114 aa13.04□□□□□ -0.32
PCDHB2-202ENST00000622947 DEFB4AO15263 64 aa13.04□□□□□ -0.32
PCDHB2-202ENST00000622947 AMELXQ99217 191 aa13.04□□□□□ -0.32
PCDHB2-202ENST00000622947 IGLV4-3A0A075B6K6 122 aa13.03□□□□□ -0.32
PCDHB2-202ENST00000622947 SMIM9A6NGZ8 99 aa13.03□□□□□ -0.32
PCDHB2-202ENST00000622947 H7C2G1 150 aa13.03□□□□□ -0.32
PCDHB2-202ENST00000622947 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.03□□□□□ -0.32
PCDHB2-202ENST00000622947 IGKV2-29A2NJV5 120 aaPredicted RBP13.03□□□□□ -0.32
PCDHB2-202ENST00000622947 LINC00694P0DN24 101 aa13.03□□□□□ -0.32
PCDHB2-202ENST00000622947 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.02□□□□□ -0.33
PCDHB2-202ENST00000622947 Q1RN00 199 aa13.02□□□□□ -0.33
PCDHB2-202ENST00000622947 C2orf82Q6UX34 121 aa13.02□□□□□ -0.33
PCDHB2-202ENST00000622947 NTM-AS1Q6ZSK4 140 aa13.02□□□□□ -0.33
PCDHB2-202ENST00000622947 TRBV30A0A0K0K1B3 111 aa13.01□□□□□ -0.33
PCDHB2-202ENST00000622947 RPL36AP83881 106 aaKnown RBP13.01□□□□□ -0.33
PCDHB2-202ENST00000622947 EGFEM1PQ0D2K5 195 aa13.01□□□□□ -0.33
PCDHB2-202ENST00000622947 RPL36ALQ969Q0 106 aaKnown RBP13.01□□□□□ -0.33
PCDHB2-202ENST00000622947 J3QQQ9 107 aa13.01□□□□□ -0.33
PCDHB2-202ENST00000622947 LGALS3P17931 250 aaKnown RBP13.01□□□□□ -0.33
PCDHB2-202ENST00000622947 DEFB121Q5J5C9 76 aa13.01□□□□□ -0.33
PCDHB2-202ENST00000622947 TMEM101Q96IK0 257 aa13.01□□□□□ -0.33
PCDHB2-202ENST00000622947 SPANXDQ9BXN6 97 aa13.01□□□□□ -0.33
PCDHB2-202ENST00000622947 PYGO1Q9Y3Y4 419 aa13.01□□□□□ -0.33
PCDHB2-202ENST00000622947 TRGV4A0A0C4DH28 118 aa13□□□□□ -0.33
PCDHB2-202ENST00000622947 TRBV6-4A0A1B0GX49 114 aa13□□□□□ -0.33
PCDHB2-202ENST00000622947 H3BT86 120 aa13□□□□□ -0.33
PCDHB2-202ENST00000622947 UBE2D4Q9Y2X8 147 aa13□□□□□ -0.33
PCDHB2-202ENST00000622947 IGHV4-28A0A0C4DH34 117 aa13□□□□□ -0.33
PCDHB2-202ENST00000622947 FAM222AQ5U5X8 452 aa13□□□□□ -0.33
PCDHB2-202ENST00000622947 RNASE13Q5GAN3 156 aaKnown RBP12.99□□□□□ -0.33
PCDHB2-202ENST00000622947 TMEM170BQ5T4T1 132 aa12.99□□□□□ -0.33
PCDHB2-202ENST00000622947 Q8NAQ8 132 aa12.99□□□□□ -0.33
PCDHB2-202ENST00000622947 IMUPQ9GZP8 106 aa12.99□□□□□ -0.33
PCDHB2-202ENST00000622947 MUSTN1Q8IVN3 82 aa12.98□□□□□ -0.33
PCDHB2-202ENST00000622947 NOTCH1P46531 2555 aa12.98□□□□□ -0.33
PCDHB2-202ENST00000622947 C9orf153Q5TBE3 101 aa12.98□□□□□ -0.33
PCDHB2-202ENST00000622947 C3orf22Q8N5N4 141 aa12.98□□□□□ -0.33
PCDHB2-202ENST00000622947 H7C423 109 aa12.97□□□□□ -0.33
PCDHB2-202ENST00000622947 TRIAP1O43715 76 aa12.97□□□□□ -0.33
PCDHB2-202ENST00000622947 DAZ4Q86SG3 579 aaKnown RBP12.97□□□□□ -0.33
PCDHB2-202ENST00000622947 DAZ3Q9NR90 486 aaKnown RBP12.97□□□□□ -0.33
PCDHB2-202ENST00000622947 CELA1Q9UNI1 258 aa12.96□□□□□ -0.33
PCDHB2-202ENST00000622947 FAM236AA0A1B0GUQ0 79 aa12.96□□□□□ -0.34
PCDHB2-202ENST00000622947 FAM236BA0A1B0GV22 79 aa12.96□□□□□ -0.34
PCDHB2-202ENST00000622947 J3KT08 172 aa12.95□□□□□ -0.34
PCDHB2-202ENST00000622947 LEPROTO15243 131 aa12.95□□□□□ -0.34
PCDHB2-202ENST00000622947 A0A0J9YXV3 536 aa12.94□□□□□ -0.34
PCDHB2-202ENST00000622947 A0A1B0GX51 115 aa12.94□□□□□ -0.34
PCDHB2-202ENST00000622947 LYRM9A8MSI8 78 aa12.94□□□□□ -0.34
PCDHB2-202ENST00000622947 UQCRQO14949 82 aa12.94□□□□□ -0.34
PCDHB2-202ENST00000622947 LOC107984640A0A0U1RRK4 108 aa12.93□□□□□ -0.34
PCDHB2-202ENST00000622947 NBEAL1Q6ZS30 2694 aa12.93□□□□□ -0.34
PCDHB2-202ENST00000622947 HERVK_113P63121 156 aa12.93□□□□□ -0.34
PCDHB2-202ENST00000622947 LINC00526Q96FQ7 95 aa12.93□□□□□ -0.34
PCDHB2-202ENST00000622947 MIFP14174 115 aa12.92□□□□□ -0.34
PCDHB2-202ENST00000622947 SPANXCQ9NY87 97 aa12.92□□□□□ -0.34
PCDHB2-202ENST00000622947 TMEM223A0PJW6 202 aa12.92□□□□□ -0.34
PCDHB2-202ENST00000622947 ACYP1P07311 99 aa12.92□□□□□ -0.34
PCDHB2-202ENST00000622947 ZNF22P17026 224 aaPredicted RBP12.92□□□□□ -0.34
PCDHB2-202ENST00000622947 RETNQ9HD89 108 aa12.92□□□□□ -0.34
PCDHB2-202ENST00000622947 ICOSQ9Y6W8 199 aa12.92□□□□□ -0.34
PCDHB2-202ENST00000622947 TENM3Q9P273 2699 aa12.91□□□□□ -0.34
PCDHB2-202ENST00000622947 A8MZ25 164 aa12.9□□□□□ -0.34
PCDHB2-202ENST00000622947 COX6CP09669 75 aa12.9□□□□□ -0.34
PCDHB2-202ENST00000622947 ATP5G1P05496 136 aa12.9□□□□□ -0.34
PCDHB2-202ENST00000622947 FAM19A5Q7Z5A7 132 aaPredicted RBP12.9□□□□□ -0.34
PCDHB2-202ENST00000622947 MRPS36P82909 103 aaKnown RBP12.89□□□□□ -0.35
PCDHB2-202ENST00000622947 TIMM21Q9BVV7 248 aa12.89□□□□□ -0.35
PCDHB2-202ENST00000622947 GYPEP15421 78 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms