RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 BEAN1Q3B7T3 259 aa11.25□□□□□ -0.61
NPHP4-211ENST00000622020 TIMM17BO60830 172 aa11.24□□□□□ -0.61
NPHP4-211ENST00000622020 A0A096LNT2 108 aa11.24□□□□□ -0.61
NPHP4-211ENST00000622020 IGLV5-39A0A0G2JS06 123 aa11.24□□□□□ -0.61
NPHP4-211ENST00000622020 SMCR5Q8TEV8 140 aa11.24□□□□□ -0.61
NPHP4-211ENST00000622020 C11orf68Q9H3H3 251 aaKnown RBP11.24□□□□□ -0.61
NPHP4-211ENST00000622020 FAM236AA0A1B0GUQ0 79 aa11.23□□□□□ -0.61
NPHP4-211ENST00000622020 FAM236BA0A1B0GV22 79 aa11.23□□□□□ -0.61
NPHP4-211ENST00000622020 UBE2L6O14933 153 aa11.23□□□□□ -0.61
NPHP4-211ENST00000622020 IGHV4-31P0DP07 118 aa11.23□□□□□ -0.61
NPHP4-211ENST00000622020 PPDPFQ9H3Y8 114 aa11.23□□□□□ -0.61
NPHP4-211ENST00000622020 K7EQD1 137 aa11.22□□□□□ -0.61
NPHP4-211ENST00000622020 TRGV2A0A075B6R0 118 aa11.22□□□□□ -0.61
NPHP4-211ENST00000622020 CDC42SE2Q9NRR3 84 aa11.22□□□□□ -0.61
NPHP4-211ENST00000622020 RPL35AP18077 110 aaKnown RBP11.22□□□□□ -0.61
NPHP4-211ENST00000622020 DSCR9P59020 149 aa11.22□□□□□ -0.61
NPHP4-211ENST00000622020 GCN1Q92616 2671 aaKnown RBP11.21□□□□□ -0.61
NPHP4-211ENST00000622020 A8MTW9 85 aa11.21□□□□□ -0.61
NPHP4-211ENST00000622020 MIR7-3HGQ8N6C7 128 aa11.21□□□□□ -0.61
NPHP4-211ENST00000622020 FLNAP21333 2647 aaKnown RBP11.21□□□□□ -0.61
NPHP4-211ENST00000622020 ITPR3Q14573 2671 aa11.21□□□□□ -0.62
NPHP4-211ENST00000622020 GAGE2AQ6NT46 116 aa11.21□□□□□ -0.62
NPHP4-211ENST00000622020 PFN2P35080 140 aa11.2□□□□□ -0.62
NPHP4-211ENST00000622020 C4orf3Q8WVX3 66 aa11.2□□□□□ -0.62
NPHP4-211ENST00000622020 LINC01600Q96MT4 127 aa11.2□□□□□ -0.62
NPHP4-211ENST00000622020 F5H768 121 aa11.19□□□□□ -0.62
NPHP4-211ENST00000622020 J3QLI3 93 aa11.19□□□□□ -0.62
NPHP4-211ENST00000622020 ATP5G1P05496 136 aa11.19□□□□□ -0.62
NPHP4-211ENST00000622020 LINC00158P58513 81 aa11.19□□□□□ -0.62
NPHP4-211ENST00000622020 CR1P17927 2039 aa11.19□□□□□ -0.62
NPHP4-211ENST00000622020 C5orf38Q86SI9 138 aa11.18□□□□□ -0.62
NPHP4-211ENST00000622020 LINC00337Q8N6G1 96 aa11.18□□□□□ -0.62
NPHP4-211ENST00000622020 APCP25054 2843 aa11.17□□□□□ -0.62
NPHP4-211ENST00000622020 DEFB121Q5J5C9 76 aa11.17□□□□□ -0.62
NPHP4-211ENST00000622020 C9orf129Q5T035 196 aaKnown RBP11.17□□□□□ -0.62
NPHP4-211ENST00000622020 IGLV4-60A0A075B6I1 120 aa11.17□□□□□ -0.62
NPHP4-211ENST00000622020 FAM240AA0A1B0GVK7 77 aa11.17□□□□□ -0.62
NPHP4-211ENST00000622020 TMEM243Q9BU79 118 aa11.17□□□□□ -0.62
NPHP4-211ENST00000622020 SND1-IT1Q9HBX3 110 aa11.17□□□□□ -0.62
NPHP4-211ENST00000622020 KLK5Q9Y337 293 aaPredicted RBP11.16□□□□□ -0.62
NPHP4-211ENST00000622020 CRPP02741 224 aa11.16□□□□□ -0.62
NPHP4-211ENST00000622020 C22orf24Q9Y442 160 aa11.16□□□□□ -0.62
NPHP4-211ENST00000622020 A0A087WYN8 130 aa11.15□□□□□ -0.62
NPHP4-211ENST00000622020 OR13C6PQ8NH95 151 aa11.15□□□□□ -0.62
NPHP4-211ENST00000622020 TRGV4A0A0C4DH28 118 aa11.14□□□□□ -0.63
NPHP4-211ENST00000622020 HIST2H2BCQ6DN03 193 aa11.14□□□□□ -0.63
NPHP4-211ENST00000622020 TRBV7-7A0A0K0K1E9 115 aa11.14□□□□□ -0.63
NPHP4-211ENST00000622020 LOC107984640A0A0U1RRK4 108 aa11.14□□□□□ -0.63
NPHP4-211ENST00000622020 SLPIP03973 132 aa11.14□□□□□ -0.63
NPHP4-211ENST00000622020 COX7B2Q8TF08 81 aa11.14□□□□□ -0.63
NPHP4-211ENST00000622020 IGKV2-28A0A075B6P5 120 aa11.14□□□□□ -0.63
NPHP4-211ENST00000622020 FSHBP01225 129 aa11.14□□□□□ -0.63
NPHP4-211ENST00000622020 IGKV2D-28P01615 120 aa11.14□□□□□ -0.63
NPHP4-211ENST00000622020 C9orf153Q5TBE3 101 aa11.14□□□□□ -0.63
NPHP4-211ENST00000622020 CLPSL2Q6UWE3 100 aa11.14□□□□□ -0.63
NPHP4-211ENST00000622020 CCL24O00175 119 aa11.13□□□□□ -0.63
NPHP4-211ENST00000622020 MRPL23Q16540 153 aaKnown RBP11.13□□□□□ -0.63
NPHP4-211ENST00000622020 C14orf132Q9NPU4 83 aa11.13□□□□□ -0.63
NPHP4-211ENST00000622020 SMIM11BQ8TCY0 68 aa11.12□□□□□ -0.63
NPHP4-211ENST00000622020 A0A096LPF7 62 aa11.12□□□□□ -0.63
NPHP4-211ENST00000622020 PAX4O43316 350 aa11.12□□□□□ -0.63
NPHP4-211ENST00000622020 DNAL4O96015 105 aa11.12□□□□□ -0.63
NPHP4-211ENST00000622020 USP24Q9UPU5 2620 aa11.12□□□□□ -0.63
NPHP4-211ENST00000622020 TRBV10-1A0A0K0K1A3 114 aa11.11□□□□□ -0.63
NPHP4-211ENST00000622020 COPS9Q8WXC6 57 aa11.11□□□□□ -0.63
NPHP4-211ENST00000622020 TRACP01848 142 aa11.11□□□□□ -0.63
NPHP4-211ENST00000622020 DEFB130BP0DP73 79 aa11.11□□□□□ -0.63
NPHP4-211ENST00000622020 DEFB130AP0DP74 79 aa11.11□□□□□ -0.63
NPHP4-211ENST00000622020 MALP21145 153 aa11.11□□□□□ -0.63
NPHP4-211ENST00000622020 CSDC2Q9Y534 153 aaKnown RBP11.11□□□□□ -0.63
NPHP4-211ENST00000622020 TMEM126AQ9H061 195 aa11.1□□□□□ -0.63
NPHP4-211ENST00000622020 GIG44P09565 113 aaPredicted RBP11.1□□□□□ -0.63
NPHP4-211ENST00000622020 CCL18P55774 89 aa11.1□□□□□ -0.63
NPHP4-211ENST00000622020 SDIM1Q6ZPB5 146 aa11.1□□□□□ -0.63
NPHP4-211ENST00000622020 IL17DQ8TAD2 202 aa11.09□□□□□ -0.63
NPHP4-211ENST00000622020 TRAV13-2A0A0B4J235 113 aa11.09□□□□□ -0.63
NPHP4-211ENST00000622020 IGKV3D-7A0A0C4DH55 119 aa11.09□□□□□ -0.63
NPHP4-211ENST00000622020 LECT2O14960 151 aa11.09□□□□□ -0.63
NPHP4-211ENST00000622020 LINC00643Q86TS7 51 aa11.09□□□□□ -0.63
NPHP4-211ENST00000622020 HIVEP2P31629 2446 aa11.08□□□□□ -0.63
NPHP4-211ENST00000622020 ACYP1P07311 99 aa11.08□□□□□ -0.64
NPHP4-211ENST00000622020 XCL1P47992 114 aa11.08□□□□□ -0.64
NPHP4-211ENST00000622020 PRR3P79522 188 aaKnown RBP11.08□□□□□ -0.64
NPHP4-211ENST00000622020 NCR3O14931 201 aa11.08□□□□□ -0.64
NPHP4-211ENST00000622020 PLAC8L1A1L4L8 177 aa11.07□□□□□ -0.64
NPHP4-211ENST00000622020 C3orf22Q8N5N4 141 aa11.07□□□□□ -0.64
NPHP4-211ENST00000622020 DNAJC9-AS1A6NH13 148 aa11.06□□□□□ -0.64
NPHP4-211ENST00000622020 RPL28P46779 137 aaKnown RBP11.06□□□□□ -0.64
NPHP4-211ENST00000622020 C6orf226Q5I0X4 101 aa11.06□□□□□ -0.64
NPHP4-211ENST00000622020 FAM19A3Q7Z5A8 133 aa11.06□□□□□ -0.64
NPHP4-211ENST00000622020 ESM1Q9NQ30 184 aa11.06□□□□□ -0.64
NPHP4-211ENST00000622020 DEFB113Q30KQ7 82 aa11.05□□□□□ -0.64
NPHP4-211ENST00000622020 RNASE1P07998 156 aaKnown RBP11.04□□□□□ -0.64
NPHP4-211ENST00000622020 A0A087WVE0 104 aa11.04□□□□□ -0.64
NPHP4-211ENST00000622020 TRBV6-8A0A0A6YYG3 113 aa11.04□□□□□ -0.64
NPHP4-211ENST00000622020 IGHV3OR16-9A0A0B4J2B5 98 aa11.04□□□□□ -0.64
NPHP4-211ENST00000622020 INAFM2P0DMQ5 153 aa11.03□□□□□ -0.64
NPHP4-211ENST00000622020 WFDC11Q8NEX6 87 aa11.03□□□□□ -0.64
NPHP4-211ENST00000622020 BBC3Q96PG8 261 aaPredicted RBP11.03□□□□□ -0.64
NPHP4-211ENST00000622020 C16orf74Q96GX8 76 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms