RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 LINC00469Q8N7U9 141 aa7.21□□□□□ -1.26
CPNE3-212ENST00000621783 PRR34Q9NV39 138 aa7.21□□□□□ -1.26
CPNE3-212ENST00000621783 TMEM223A0PJW6 202 aa7.2□□□□□ -1.26
CPNE3-212ENST00000621783 CCL25O15444 150 aa7.2□□□□□ -1.26
CPNE3-212ENST00000621783 HERVK_113P61574 105 aa7.2□□□□□ -1.26
CPNE3-212ENST00000621783 ENHOQ6UWT2 76 aa7.2□□□□□ -1.26
CPNE3-212ENST00000621783 UBE2WQ96B02 151 aa7.2□□□□□ -1.26
CPNE3-212ENST00000621783 CDKN2A-AS1Q9UH64 79 aa7.2□□□□□ -1.26
CPNE3-212ENST00000621783 IGLV10-54A0A075B6I4 117 aa7.19□□□□□ -1.26
CPNE3-212ENST00000621783 IGKV2D-26A0A0A0MRZ7 120 aa7.19□□□□□ -1.26
CPNE3-212ENST00000621783 XCL1P47992 114 aa7.19□□□□□ -1.26
CPNE3-212ENST00000621783 PRO1933Q9H354 126 aa7.19□□□□□ -1.26
CPNE3-212ENST00000621783 Q9H8V8 135 aa7.19□□□□□ -1.26
CPNE3-212ENST00000621783 DYNC2H1Q8NCM8 4307 aaKnown RBP7.18□□□□□ -1.26
CPNE3-212ENST00000621783 IGHV3-64A0A075B6Q5 118 aa7.18□□□□□ -1.26
CPNE3-212ENST00000621783 E9PLD3 99 aa7.18□□□□□ -1.26
CPNE3-212ENST00000621783 H3BRM9 83 aa7.18□□□□□ -1.26
CPNE3-212ENST00000621783 SPINK8P0C7L1 97 aa7.18□□□□□ -1.26
CPNE3-212ENST00000621783 NMUP48645 174 aa7.18□□□□□ -1.26
CPNE3-212ENST00000621783 MIAQ16674 131 aa7.18□□□□□ -1.26
CPNE3-212ENST00000621783 CHCHD10Q8WYQ3 142 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-212ENST00000621783 TRAV8-3A0A0A6YYJ7 113 aa7.17□□□□□ -1.26
CPNE3-212ENST00000621783 IGHV3OR16-9A0A0B4J2B5 98 aa7.17□□□□□ -1.26
CPNE3-212ENST00000621783 SMIM1B2RUZ4 78 aa7.17□□□□□ -1.26
CPNE3-212ENST00000621783 DNAH7Q8WXX0 4024 aa7.17□□□□□ -1.26
CPNE3-212ENST00000621783 TRAV8-4A0A0B4J246 113 aa7.16□□□□□ -1.26
CPNE3-212ENST00000621783 GAGE12HA6NDE8 117 aa7.16□□□□□ -1.26
CPNE3-212ENST00000621783 IBA57-AS1B1ANH7 110 aa7.16□□□□□ -1.26
CPNE3-212ENST00000621783 TSPEAR-AS2P59090 65 aa7.16□□□□□ -1.26
CPNE3-212ENST00000621783 FOXI1Q12951 378 aa7.16□□□□□ -1.26
CPNE3-212ENST00000621783 CD164L2Q6UWJ8 174 aa7.16□□□□□ -1.26
CPNE3-212ENST00000621783 C5orf38Q86SI9 138 aa7.16□□□□□ -1.26
CPNE3-212ENST00000621783 C10orf126Q8N4M7 172 aa7.16□□□□□ -1.26
CPNE3-212ENST00000621783 TP73-AS1Q9UF72 201 aa7.16□□□□□ -1.26
CPNE3-212ENST00000621783 A0A087WZ39 114 aa7.15□□□□□ -1.26
CPNE3-212ENST00000621783 IGHV1-58A0A0C4DH39 117 aa7.15□□□□□ -1.26
CPNE3-212ENST00000621783 LOC100996750A0A140TA64 210 aa7.15□□□□□ -1.26
CPNE3-212ENST00000621783 TSTD3H0UI37 97 aa7.15□□□□□ -1.26
CPNE3-212ENST00000621783 C3orf84H3BNL1 204 aa7.15□□□□□ -1.26
CPNE3-212ENST00000621783 LEPROTO15243 131 aa7.15□□□□□ -1.26
CPNE3-212ENST00000621783 COX8AP10176 69 aa7.15□□□□□ -1.26
CPNE3-212ENST00000621783 CASC10Q5T4H9 136 aa7.15□□□□□ -1.26
CPNE3-212ENST00000621783 PCP2Q8IVA1 136 aa7.15□□□□□ -1.26
CPNE3-212ENST00000621783 C14orf144Q96I85 54 aa7.15□□□□□ -1.26
CPNE3-212ENST00000621783 KRTAP4-6Q9BYQ5 205 aa7.15□□□□□ -1.26
CPNE3-212ENST00000621783 KRTAP1-5Q9BYS1 174 aa7.15□□□□□ -1.26
CPNE3-212ENST00000621783 Q9HAA7 133 aa7.15□□□□□ -1.26
CPNE3-212ENST00000621783 IGLV5-39A0A0G2JS06 123 aa7.14□□□□□ -1.27
CPNE3-212ENST00000621783 K7EP13 123 aa7.14□□□□□ -1.27
CPNE3-212ENST00000621783 COX7A2LO14548 114 aa7.14□□□□□ -1.27
CPNE3-212ENST00000621783 KRTAP26-1Q6PEX3 210 aa7.14□□□□□ -1.27
CPNE3-212ENST00000621783 PLEKHB2Q96CS7 222 aa7.14□□□□□ -1.27
CPNE3-212ENST00000621783 C1orf43Q9BWL3 253 aa7.14□□□□□ -1.27
CPNE3-212ENST00000621783 TTTY13Q9BZ97 58 aa7.14□□□□□ -1.27
CPNE3-212ENST00000621783 IGKV2D-24A0A075B6R9 120 aa7.13□□□□□ -1.27
CPNE3-212ENST00000621783 J3QQQ9 107 aa7.13□□□□□ -1.27
CPNE3-212ENST00000621783 LGALS3P17931 250 aaKnown RBP7.13□□□□□ -1.27
CPNE3-212ENST00000621783 LINC01561Q8N1V8 128 aa7.13□□□□□ -1.27
CPNE3-212ENST00000621783 UQCR10Q9UDW1 63 aa7.13□□□□□ -1.27
CPNE3-212ENST00000621783 CSMD3Q7Z407 3707 aa7.13□□□□□ -1.27
CPNE3-212ENST00000621783 TTC32Q5I0X7 151 aa7.12□□□□□ -1.27
CPNE3-212ENST00000621783 SLC25A34Q6PIV7 304 aa7.12□□□□□ -1.27
CPNE3-212ENST00000621783 BOD1L2Q8IYS8 172 aa7.12□□□□□ -1.27
CPNE3-212ENST00000621783 MAPKAPK5-AS1Q8N8E1 139 aa7.12□□□□□ -1.27
CPNE3-212ENST00000621783 MIEN1Q9BRT3 115 aa7.12□□□□□ -1.27
CPNE3-212ENST00000621783 STARD9Q9P2P6 4700 aa7.12□□□□□ -1.27
CPNE3-212ENST00000621783 NBDYA0A0U1RRE5 68 aa7.11□□□□□ -1.27
CPNE3-212ENST00000621783 ZNF815PA8K554 130 aa7.11□□□□□ -1.27
CPNE3-212ENST00000621783 DLEU1O43261 78 aa7.11□□□□□ -1.27
CPNE3-212ENST00000621783 MALP21145 153 aa7.11□□□□□ -1.27
CPNE3-212ENST00000621783 COX7B2Q8TF08 81 aa7.11□□□□□ -1.27
CPNE3-212ENST00000621783 RMI2Q96E14 147 aa7.11□□□□□ -1.27
CPNE3-212ENST00000621783 MYMXA0A1B0GTQ4 84 aa7.1□□□□□ -1.27
CPNE3-212ENST00000621783 PCP4L1A6NKN8 68 aa7.1□□□□□ -1.27
CPNE3-212ENST00000621783 TNP2Q05952 138 aa7.1□□□□□ -1.27
CPNE3-212ENST00000621783 ORAOV1Q8WV07 137 aa7.1□□□□□ -1.27
CPNE3-212ENST00000621783 LINC00476Q8WZB0 136 aa7.1□□□□□ -1.27
CPNE3-212ENST00000621783 TOMM7Q9P0U1 55 aa7.1□□□□□ -1.27
CPNE3-212ENST00000621783 APOMO95445 188 aa7.09□□□□□ -1.27
CPNE3-212ENST00000621783 HNRNPA3P51991 378 aaKnown RBP7.09□□□□□ -1.27
CPNE3-212ENST00000621783 C2orf91Q6ZV80 131 aa7.09□□□□□ -1.27
CPNE3-212ENST00000621783 NDUFA12Q9UI09 145 aa7.09□□□□□ -1.27
CPNE3-212ENST00000621783 NDUFA1O15239 70 aa7.08□□□□□ -1.28
CPNE3-212ENST00000621783 LY6G6CO95867 125 aa7.08□□□□□ -1.28
CPNE3-212ENST00000621783 LORP23490 312 aaPredicted RBP7.08□□□□□ -1.28
CPNE3-212ENST00000621783 DDTP30046 118 aa7.08□□□□□ -1.28
CPNE3-212ENST00000621783 SPAG11BQ08648 103 aa7.08□□□□□ -1.28
CPNE3-212ENST00000621783 Q8IZM0 81 aa7.08□□□□□ -1.28
CPNE3-212ENST00000621783 M0R2N4 97 aa7.07□□□□□ -1.28
CPNE3-212ENST00000621783 PRSS2P07478 247 aa7.07□□□□□ -1.28
CPNE3-212ENST00000621783 KIAA0087Q14695 138 aa7.07□□□□□ -1.28
CPNE3-212ENST00000621783 C15orf56Q8N910 161 aa7.07□□□□□ -1.28
CPNE3-212ENST00000621783 ZNF625Q96I27 306 aaPredicted RBP7.07□□□□□ -1.28
CPNE3-212ENST00000621783 PLECQ15149 4684 aaKnown RBP7.06□□□□□ -1.28
CPNE3-212ENST00000621783 CFAP161Q6P656 301 aa7.06□□□□□ -1.28
CPNE3-212ENST00000621783 SCGB1D4Q6XE38 83 aa7.06□□□□□ -1.28
CPNE3-212ENST00000621783 TM2D2Q9BX73 214 aa7.06□□□□□ -1.28
CPNE3-212ENST00000621783 COX11Q9Y6N1 276 aa7.06□□□□□ -1.28
CPNE3-212ENST00000621783 GVQW2A0A096LPI5 108 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-212ENST00000621783 A0A0J9YXY3 114 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms