RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 RNF183Q96D59 192 aa10.04□□□□□ -0.8
CNOT3-210ENST00000618939 BBC3Q96PG8 261 aaPredicted RBP10.04□□□□□ -0.8
CNOT3-210ENST00000618939 WDFY4Q6ZS81 3184 aa10.03□□□□□ -0.8
CNOT3-210ENST00000618939 SZT2Q5T011 3432 aa10.03□□□□□ -0.8
CNOT3-210ENST00000618939 RMI2Q96E14 147 aa10.03□□□□□ -0.8
CNOT3-210ENST00000618939 HILS1P60008 231 aa10.03□□□□□ -0.8
CNOT3-210ENST00000618939 BEAN1Q3B7T3 259 aa10.03□□□□□ -0.8
CNOT3-210ENST00000618939 CITED1Q99966 193 aa10.03□□□□□ -0.8
CNOT3-210ENST00000618939 XGP55808 180 aa10.03□□□□□ -0.8
CNOT3-210ENST00000618939 SMIM1B2RUZ4 78 aa10.02□□□□□ -0.81
CNOT3-210ENST00000618939 LINC00694P0DN24 101 aa10.02□□□□□ -0.81
CNOT3-210ENST00000618939 NDUFV3P56181 108 aaKnown RBP10.02□□□□□ -0.81
CNOT3-210ENST00000618939 VPS13AQ96RL7 3174 aa10.02□□□□□ -0.81
CNOT3-210ENST00000618939 ADAMTSL4-AS1Q5T5F5 129 aa10.01□□□□□ -0.81
CNOT3-210ENST00000618939 TMEM256-PLSCR3K7ERE1 68 aa10.01□□□□□ -0.81
CNOT3-210ENST00000618939 RBMY1FQ15415 496 aaKnown RBP10.01□□□□□ -0.81
CNOT3-210ENST00000618939 INAFM1C9JVW0 142 aa10.01□□□□□ -0.81
CNOT3-210ENST00000618939 ATOX1O00244 68 aa10.01□□□□□ -0.81
CNOT3-210ENST00000618939 MGAQ8IWI9 3026 aa10.01□□□□□ -0.81
CNOT3-210ENST00000618939 LINC00959A0A1B0GUT2 108 aa10□□□□□ -0.81
CNOT3-210ENST00000618939 COX6A2Q02221 97 aa10□□□□□ -0.81
CNOT3-210ENST00000618939 RPL18AQ02543 176 aaKnown RBP10□□□□□ -0.81
CNOT3-210ENST00000618939 A0A1B0GX51 115 aa9.99□□□□□ -0.81
CNOT3-210ENST00000618939 IGLV1-51P01701 117 aa9.99□□□□□ -0.81
CNOT3-210ENST00000618939 DIRC1Q969H9 104 aa9.99□□□□□ -0.81
CNOT3-210ENST00000618939 LAMA1P25391 3075 aa9.99□□□□□ -0.81
CNOT3-210ENST00000618939 SLPIP03973 132 aa9.98□□□□□ -0.81
CNOT3-210ENST00000618939 RBM3P98179 157 aaKnown RBP9.98□□□□□ -0.81
CNOT3-210ENST00000618939 MRAPQ8TCY5 172 aa9.98□□□□□ -0.81
CNOT3-210ENST00000618939 DEFB105AQ8NG35 78 aa9.98□□□□□ -0.81
CNOT3-210ENST00000618939 CSDC2Q9Y534 153 aaKnown RBP9.98□□□□□ -0.81
CNOT3-210ENST00000618939 MIFP14174 115 aa9.97□□□□□ -0.81
CNOT3-210ENST00000618939 DNAH14Q0VDD8 3507 aa9.97□□□□□ -0.81
CNOT3-210ENST00000618939 HIGD2BQ4VC39 106 aa9.96□□□□□ -0.81
CNOT3-210ENST00000618939 CD164L2Q6UWJ8 174 aa9.96□□□□□ -0.81
CNOT3-210ENST00000618939 IGHV4-28A0A0C4DH34 117 aa9.96□□□□□ -0.81
CNOT3-210ENST00000618939 LY6G6DO95868 133 aa9.96□□□□□ -0.81
CNOT3-210ENST00000618939 C11orf72Q8NBR9 251 aa9.96□□□□□ -0.82
CNOT3-210ENST00000618939 H3BQ85 93 aa9.95□□□□□ -0.82
CNOT3-210ENST00000618939 CCL18P55774 89 aa9.95□□□□□ -0.82
CNOT3-210ENST00000618939 SMIM11BQ8TCY0 68 aa9.95□□□□□ -0.82
CNOT3-210ENST00000618939 ZNF292O60281 2723 aa9.95□□□□□ -0.82
CNOT3-210ENST00000618939 FASNP49327 2511 aaKnown RBP9.95□□□□□ -0.82
CNOT3-210ENST00000618939 ETDCA0A1B0GVM5 59 aa9.95□□□□□ -0.82
CNOT3-210ENST00000618939 Q8N2B8 174 aa9.95□□□□□ -0.82
CNOT3-210ENST00000618939 VCANP13611 3396 aa9.94□□□□□ -0.82
CNOT3-210ENST00000618939 SMIM20Q8N5G0 67 aa9.94□□□□□ -0.82
CNOT3-210ENST00000618939 IGLV4-60A0A075B6I1 120 aa9.94□□□□□ -0.82
CNOT3-210ENST00000618939 hADV29S1A0JD25 119 aa9.94□□□□□ -0.82
CNOT3-210ENST00000618939 C6orf99Q4VX62 202 aa9.94□□□□□ -0.82
CNOT3-210ENST00000618939 CLUHP3Q96NS8 147 aa9.93□□□□□ -0.82
CNOT3-210ENST00000618939 COX7BP24311 80 aa9.92□□□□□ -0.82
CNOT3-210ENST00000618939 KIR2DL5BQ8NHK3 375 aa9.92□□□□□ -0.82
CNOT3-210ENST00000618939 FHL2Q14192 279 aa9.92□□□□□ -0.82
CNOT3-210ENST00000618939 XAGE1AQ9HD64 81 aa9.92□□□□□ -0.82
CNOT3-210ENST00000618939 SDIM1Q6ZPB5 146 aa9.92□□□□□ -0.82
CNOT3-210ENST00000618939 Q8IZM0 81 aa9.92□□□□□ -0.82
CNOT3-210ENST00000618939 MUC4Q99102 2169 aa9.91□□□□□ -0.82
CNOT3-210ENST00000618939 SMR3AQ99954 134 aa9.91□□□□□ -0.82
CNOT3-210ENST00000618939 A0A087WZ39 114 aa9.91□□□□□ -0.82
CNOT3-210ENST00000618939 UBE2BP63146 152 aa9.91□□□□□ -0.82
CNOT3-210ENST00000618939 LINC00526Q96FQ7 95 aa9.91□□□□□ -0.82
CNOT3-210ENST00000618939 Q9UF83 564 aa9.91□□□□□ -0.82
CNOT3-210ENST00000618939 PDE6GP18545 87 aa9.9□□□□□ -0.82
CNOT3-210ENST00000618939 FUSP35637 526 aaKnown RBP eCLIP9.9□□□□□ -0.82
CNOT3-210ENST00000618939 C16orf95Q9H693 158 aa9.9□□□□□ -0.82
CNOT3-210ENST00000618939 FAM110AQ9BQ89 295 aa9.89□□□□□ -0.83
CNOT3-210ENST00000618939 FAM240AA0A1B0GVK7 77 aa9.89□□□□□ -0.83
CNOT3-210ENST00000618939 LELP1Q5T871 98 aa9.89□□□□□ -0.83
CNOT3-210ENST00000618939 C11orf45Q8TAV5 145 aa9.89□□□□□ -0.83
CNOT3-210ENST00000618939 PRO0461Q9UI25 63 aa9.88□□□□□ -0.83
CNOT3-210ENST00000618939 RPL28P46779 137 aaKnown RBP9.88□□□□□ -0.83
CNOT3-210ENST00000618939 SMCPP49901 116 aaPredicted RBP9.87□□□□□ -0.83
CNOT3-210ENST00000618939 NREPQ16612 68 aa9.87□□□□□ -0.83
CNOT3-210ENST00000618939 IMUPQ9GZP8 106 aa9.87□□□□□ -0.83
CNOT3-210ENST00000618939 PLA2G2AP14555 144 aa9.87□□□□□ -0.83
CNOT3-210ENST00000618939 IGLV5-39A0A0G2JS06 123 aa9.86□□□□□ -0.83
CNOT3-210ENST00000618939 DEFB131BA0A096LNP1 70 aa9.86□□□□□ -0.83
CNOT3-210ENST00000618939 NTM-AS1Q6ZSK4 140 aa9.86□□□□□ -0.83
CNOT3-210ENST00000618939 UQCRQO14949 82 aa9.85□□□□□ -0.83
CNOT3-210ENST00000618939 COX17Q14061 63 aa9.85□□□□□ -0.83
CNOT3-210ENST00000618939 TRAV23DV6A0A075B6W5 121 aa9.84□□□□□ -0.83
CNOT3-210ENST00000618939 M0QXV9 152 aa9.84□□□□□ -0.83
CNOT3-210ENST00000618939 FSHBP01225 129 aa9.84□□□□□ -0.83
CNOT3-210ENST00000618939 Q6Q795 121 aa9.84□□□□□ -0.83
CNOT3-210ENST00000618939 CDIP1Q9H305 208 aa9.84□□□□□ -0.83
CNOT3-210ENST00000618939 KPRPQ5T749 579 aaPredicted RBP9.84□□□□□ -0.83
CNOT3-210ENST00000618939 FHL3Q13643 280 aa9.83□□□□□ -0.84
CNOT3-210ENST00000618939 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.83□□□□□ -0.84
CNOT3-210ENST00000618939 UPK3BQ9BT76 320 aa9.83□□□□□ -0.84
CNOT3-210ENST00000618939 Q6ZQY7 126 aa9.83□□□□□ -0.84
CNOT3-210ENST00000618939 IGHV4-30-4P0DP06 118 aa9.82□□□□□ -0.84
CNOT3-210ENST00000618939 ATP5EP2Q5VTU8 51 aa9.82□□□□□ -0.84
CNOT3-210ENST00000618939 CENPEQ02224 2701 aa9.82□□□□□ -0.84
CNOT3-210ENST00000618939 CYSRT1A8MQ03 144 aa9.82□□□□□ -0.84
CNOT3-210ENST00000618939 IGLV5-45A0A087WSX0 123 aa9.82□□□□□ -0.84
CNOT3-210ENST00000618939 UNQ6190/PRO20217Q6UXQ8 127 aa9.81□□□□□ -0.84
CNOT3-210ENST00000618939 CELSR3Q9NYQ7 3312 aa9.81□□□□□ -0.84
CNOT3-210ENST00000618939 C9orf116Q5BN46 136 aaPredicted RBP9.81□□□□□ -0.84
CNOT3-210ENST00000618939 DSPP15924 2871 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms