RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 LINC00167Q96N53 147 aa10.98□□□□□ -0.65
GPN1-212ENST00000616939 TMEM258P61165 79 aa10.98□□□□□ -0.65
GPN1-212ENST00000616939 STHQ8IWL8 128 aa10.98□□□□□ -0.65
GPN1-212ENST00000616939 C14orf132Q9NPU4 83 aa10.98□□□□□ -0.65
GPN1-212ENST00000616939 LINC00158P58513 81 aa10.97□□□□□ -0.65
GPN1-212ENST00000616939 UPK3BQ9BT76 320 aa10.96□□□□□ -0.65
GPN1-212ENST00000616939 LINC00846Q9NV44 126 aa10.96□□□□□ -0.65
GPN1-212ENST00000616939 A0A087WZ39 114 aa10.95□□□□□ -0.66
GPN1-212ENST00000616939 IGHV3OR16-9A0A0B4J2B5 98 aa10.95□□□□□ -0.66
GPN1-212ENST00000616939 TRBV6-4A0A1B0GX49 114 aa10.95□□□□□ -0.66
GPN1-212ENST00000616939 S100A7L2Q5SY68 101 aa10.95□□□□□ -0.66
GPN1-212ENST00000616939 C9orf129Q5T035 196 aaKnown RBP10.95□□□□□ -0.66
GPN1-212ENST00000616939 LECT2O14960 151 aa10.95□□□□□ -0.66
GPN1-212ENST00000616939 ATP5EP2Q5VTU8 51 aa10.95□□□□□ -0.66
GPN1-212ENST00000616939 hADV29S1A0JD25 119 aa10.94□□□□□ -0.66
GPN1-212ENST00000616939 ORMDL1Q9P0S3 153 aa10.94□□□□□ -0.66
GPN1-212ENST00000616939 ZFHX3Q15911 3703 aa10.94□□□□□ -0.66
GPN1-212ENST00000616939 IGKV3D-7A0A0C4DH55 119 aa10.93□□□□□ -0.66
GPN1-212ENST00000616939 CCKP06307 115 aa10.93□□□□□ -0.66
GPN1-212ENST00000616939 IGF2RP11717 2491 aa10.93□□□□□ -0.66
GPN1-212ENST00000616939 C5orf47Q569G3 176 aa10.93□□□□□ -0.66
GPN1-212ENST00000616939 CSPG4Q6UVK1 2322 aa10.93□□□□□ -0.66
GPN1-212ENST00000616939 C16orf74Q96GX8 76 aa10.93□□□□□ -0.66
GPN1-212ENST00000616939 TOMM7Q9P0U1 55 aa10.93□□□□□ -0.66
GPN1-212ENST00000616939 CMC4P56277 68 aaPredicted RBP10.92□□□□□ -0.66
GPN1-212ENST00000616939 LOC107984640A0A0U1RRK4 108 aa10.91□□□□□ -0.66
GPN1-212ENST00000616939 USP17L23D6RBM5 183 aa10.91□□□□□ -0.66
GPN1-212ENST00000616939 LINC01561Q8N1V8 128 aa10.91□□□□□ -0.66
GPN1-212ENST00000616939 C11orf44Q8N8P7 122 aa10.91□□□□□ -0.66
GPN1-212ENST00000616939 A0A1W2PRX2 142 aa10.91□□□□□ -0.66
GPN1-212ENST00000616939 JMJD7-PLA2G4BH0Y9G9 81 aa10.91□□□□□ -0.66
GPN1-212ENST00000616939 SS18Q15532 418 aa10.91□□□□□ -0.66
GPN1-212ENST00000616939 FAM19A5Q7Z5A7 132 aaPredicted RBP10.91□□□□□ -0.66
GPN1-212ENST00000616939 OR13C6PQ8NH95 151 aa10.91□□□□□ -0.66
GPN1-212ENST00000616939 PLAC8L1A1L4L8 177 aa10.9□□□□□ -0.66
GPN1-212ENST00000616939 NOP10Q9NPE3 64 aaKnown RBP10.9□□□□□ -0.66
GPN1-212ENST00000616939 ASH1LQ9NR48 2969 aaKnown RBP10.9□□□□□ -0.66
GPN1-212ENST00000616939 SVEP1Q4LDE5 3571 aa10.89□□□□□ -0.67
GPN1-212ENST00000616939 TRBV6-8A0A0A6YYG3 113 aa10.89□□□□□ -0.67
GPN1-212ENST00000616939 SMIM9A6NGZ8 99 aa10.89□□□□□ -0.67
GPN1-212ENST00000616939 NCR3O14931 201 aa10.89□□□□□ -0.67
GPN1-212ENST00000616939 PAX4O43316 350 aa10.89□□□□□ -0.67
GPN1-212ENST00000616939 IGLV4-60A0A075B6I1 120 aa10.88□□□□□ -0.67
GPN1-212ENST00000616939 IGHV4-31P0DP07 118 aa10.88□□□□□ -0.67
GPN1-212ENST00000616939 LYPD5Q6UWN5 251 aa10.88□□□□□ -0.67
GPN1-212ENST00000616939 RELNP78509 3460 aa10.88□□□□□ -0.67
GPN1-212ENST00000616939 TRBV10-3A0A0K0K1G6 114 aa10.87□□□□□ -0.67
GPN1-212ENST00000616939 NDUFC2-KCTD14E9PQ53 114 aa10.87□□□□□ -0.67
GPN1-212ENST00000616939 KHDC1LQ5JSQ8 128 aa10.87□□□□□ -0.67
GPN1-212ENST00000616939 DPH3Q96FX2 82 aa10.87□□□□□ -0.67
GPN1-212ENST00000616939 CR1P17927 2039 aa10.87□□□□□ -0.67
GPN1-212ENST00000616939 LOC100131303A0A0U1RQF7 123 aa10.86□□□□□ -0.67
GPN1-212ENST00000616939 Q8IZM0 81 aa10.86□□□□□ -0.67
GPN1-212ENST00000616939 CYSTM1Q9H1C7 97 aa10.86□□□□□ -0.67
GPN1-212ENST00000616939 NDUFC2O95298 119 aa10.86□□□□□ -0.67
GPN1-212ENST00000616939 TMEM86BQ8N661 226 aa10.86□□□□□ -0.67
GPN1-212ENST00000616939 TRGV2A0A075B6R0 118 aa10.85□□□□□ -0.67
GPN1-212ENST00000616939 A0A087WVE0 104 aa10.85□□□□□ -0.67
GPN1-212ENST00000616939 LINC00959A0A1B0GUT2 108 aa10.85□□□□□ -0.67
GPN1-212ENST00000616939 GIG44P09565 113 aaPredicted RBP10.85□□□□□ -0.67
GPN1-212ENST00000616939 PFN2P35080 140 aa10.85□□□□□ -0.67
GPN1-212ENST00000616939 TRGV4A0A0C4DH28 118 aa10.84□□□□□ -0.67
GPN1-212ENST00000616939 TMEM256-PLSCR3K7ERE1 68 aa10.84□□□□□ -0.67
GPN1-212ENST00000616939 BCE1O60756 84 aa10.84□□□□□ -0.67
GPN1-212ENST00000616939 SLPIP03973 132 aa10.84□□□□□ -0.67
GPN1-212ENST00000616939 FHL2Q14192 279 aa10.84□□□□□ -0.67
GPN1-212ENST00000616939 Q8N814 137 aa10.83□□□□□ -0.68
GPN1-212ENST00000616939 IGKV3OR2-268A0A0C4DH90 116 aa10.82□□□□□ -0.68
GPN1-212ENST00000616939 NANOS2P60321 138 aaKnown RBP10.82□□□□□ -0.68
GPN1-212ENST00000616939 C6orf226Q5I0X4 101 aa10.82□□□□□ -0.68
GPN1-212ENST00000616939 CREBBPQ92793 2442 aa10.81□□□□□ -0.68
GPN1-212ENST00000616939 A0A1B0GUV1 79 aa10.8□□□□□ -0.68
GPN1-212ENST00000616939 COX17Q14061 63 aa10.8□□□□□ -0.68
GPN1-212ENST00000616939 CSNK1G2-AS1Q8NCQ2 148 aa10.79□□□□□ -0.68
GPN1-212ENST00000616939 MAPK1IP1LQ8NDC0 245 aa10.79□□□□□ -0.68
GPN1-212ENST00000616939 WIPF1O43516 503 aa10.79□□□□□ -0.68
GPN1-212ENST00000616939 GHRHP01286 108 aa10.79□□□□□ -0.68
GPN1-212ENST00000616939 CELSR1Q9NYQ6 3014 aa10.78□□□□□ -0.68
GPN1-212ENST00000616939 CCL24O00175 119 aa10.78□□□□□ -0.68
GPN1-212ENST00000616939 KIR2DL5BQ8NHK3 375 aa10.78□□□□□ -0.68
GPN1-212ENST00000616939 LINC00612Q8N6U2 182 aa10.77□□□□□ -0.69
GPN1-212ENST00000616939 UBL5Q9BZL1 73 aa10.77□□□□□ -0.69
GPN1-212ENST00000616939 C19orf73Q9NVV2 129 aa10.76□□□□□ -0.69
GPN1-212ENST00000616939 LOC110117498A0A087WWA1 95 aa10.75□□□□□ -0.69
GPN1-212ENST00000616939 MUC7Q8TAX7 377 aa10.75□□□□□ -0.69
GPN1-212ENST00000616939 IGHV4-28A0A0C4DH34 117 aa10.74□□□□□ -0.69
GPN1-212ENST00000616939 OXTP01178 125 aa10.74□□□□□ -0.69
GPN1-212ENST00000616939 HILS1P60008 231 aa10.74□□□□□ -0.69
GPN1-212ENST00000616939 H3BQ85 93 aa10.74□□□□□ -0.69
GPN1-212ENST00000616939 DSCR8Q96T75 97 aa10.74□□□□□ -0.69
GPN1-212ENST00000616939 KIAA0087Q14695 138 aa10.73□□□□□ -0.69
GPN1-212ENST00000616939 DOPEY1Q5JWR5 2465 aa10.73□□□□□ -0.69
GPN1-212ENST00000616939 XCL1P47992 114 aa10.72□□□□□ -0.69
GPN1-212ENST00000616939 C11orf68Q9H3H3 251 aaKnown RBP10.72□□□□□ -0.69
GPN1-212ENST00000616939 ZNF561-AS1K7EIQ3 104 aa10.72□□□□□ -0.69
GPN1-212ENST00000616939 ENHOQ6UWT2 76 aa10.72□□□□□ -0.69
GPN1-212ENST00000616939 LINC00575Q6W349 94 aa10.72□□□□□ -0.69
GPN1-212ENST00000616939 Q6ZQT0 140 aa10.72□□□□□ -0.69
GPN1-212ENST00000616939 FAM19A1Q7Z5A9 133 aa10.72□□□□□ -0.69
GPN1-212ENST00000616939 C6orf223Q8N319 242 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms