RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 ORMDL3Q8N138 153 aa3.63□□□□□ -1.83
CPNE3-208ENST00000614678 FRZBQ92765 325 aa3.63□□□□□ -1.83
CPNE3-208ENST00000614678 PNRC1Q12796 327 aaPredicted RBP3.63□□□□□ -1.83
CPNE3-208ENST00000614678 CHAC1Q9BUX1 264 aa3.63□□□□□ -1.83
CPNE3-208ENST00000614678 H3BS24 57 aa3.63□□□□□ -1.83
CPNE3-208ENST00000614678 TMEM97Q5BJF2 176 aa3.63□□□□□ -1.83
CPNE3-208ENST00000614678 C10orf25Q5T742 122 aa3.63□□□□□ -1.83
CPNE3-208ENST00000614678 C9orf163Q8N9P6 203 aa3.63□□□□□ -1.83
CPNE3-208ENST00000614678 URB1-AS1Q96HZ7 61 aa3.63□□□□□ -1.83
CPNE3-208ENST00000614678 KIR2DL4Q99706 377 aa3.63□□□□□ -1.83
CPNE3-208ENST00000614678 RAB5AP20339 215 aa3.62□□□□□ -1.83
CPNE3-208ENST00000614678 RMI2Q96E14 147 aa3.62□□□□□ -1.83
CPNE3-208ENST00000614678 AP5S1Q9NUS5 200 aa3.62□□□□□ -1.83
CPNE3-208ENST00000614678 RAB5BP61020 215 aa3.62□□□□□ -1.83
CPNE3-208ENST00000614678 LINC00173Q6ZV60 143 aa3.62□□□□□ -1.83
CPNE3-208ENST00000614678 MRPL52Q86TS9 123 aaKnown RBP3.62□□□□□ -1.83
CPNE3-208ENST00000614678 IGLV4-69A0A075B6H9 119 aa3.62□□□□□ -1.83
CPNE3-208ENST00000614678 A0A096LNI7 61 aa3.62□□□□□ -1.83
CPNE3-208ENST00000614678 DGAT2L7PQ6IED9 249 aa3.62□□□□□ -1.83
CPNE3-208ENST00000614678 BTF3L4Q96K17 158 aa3.62□□□□□ -1.83
CPNE3-208ENST00000614678 CTDSP1Q9GZU7 261 aa3.62□□□□□ -1.83
CPNE3-208ENST00000614678 COX11Q9Y6N1 276 aa3.62□□□□□ -1.83
CPNE3-208ENST00000614678 IGLV4-3A0A075B6K6 122 aa3.62□□□□□ -1.83
CPNE3-208ENST00000614678 C20orf78Q9BR46 151 aa3.62□□□□□ -1.83
CPNE3-208ENST00000614678 TRAV8-4A0A0B4J246 113 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 C1orf196B1AJZ1 125 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 PPP1R2P9O14990 202 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 HIST1H2BKO60814 126 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 HIST1H2BJP06899 126 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 HIST1H2BOP23527 126 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 HIST1H2BBP33778 126 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 HIST1H2BDP58876 126 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 HIST1H2BCP62807 126 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 HIST2H2BEQ16778 126 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.61□□□□□ -1.83
CPNE3-208ENST00000614678 Q6ZRU5 148 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 ATP5L2Q7Z4Y8 100 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 HIST1H2BHQ93079 126 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 HIST1H2BNQ99877 126 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 HIST1H2BMQ99879 126 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 A0A087WYN8 130 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 MAJINQ3KP22 176 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 C9orf116Q5BN46 136 aaPredicted RBP3.61□□□□□ -1.83
CPNE3-208ENST00000614678 C2orf82Q6UX34 121 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 TMEM101Q96IK0 257 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 PRO1933Q9H354 126 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 UBR4Q5T4S7 5183 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 G0S2P27469 103 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 C2orf66Q6UXQ4 117 aa3.61□□□□□ -1.83
CPNE3-208ENST00000614678 LINC00242Q5T6M2 205 aa3.6□□□□□ -1.83
CPNE3-208ENST00000614678 ALKBH7Q9BT30 221 aaPredicted RBP3.6□□□□□ -1.83
CPNE3-208ENST00000614678 SMCO4Q9NRQ5 59 aa3.6□□□□□ -1.83
CPNE3-208ENST00000614678 A0A096LNJ9 63 aa3.6□□□□□ -1.83
CPNE3-208ENST00000614678 FAM168BA1KXE4 195 aa3.6□□□□□ -1.83
CPNE3-208ENST00000614678 INAFM2P0DMQ5 153 aa3.6□□□□□ -1.83
CPNE3-208ENST00000614678 PET117Q6UWS5 81 aa3.6□□□□□ -1.83
CPNE3-208ENST00000614678 KRTAP11-1Q8IUC1 163 aa3.6□□□□□ -1.83
CPNE3-208ENST00000614678 MRPL18Q9H0U6 180 aaKnown RBP3.6□□□□□ -1.83
CPNE3-208ENST00000614678 IGHV3OR16-9A0A0B4J2B5 98 aa3.6□□□□□ -1.83
CPNE3-208ENST00000614678 A0A1B0GW15 77 aa3.6□□□□□ -1.83
CPNE3-208ENST00000614678 ZNF25P17030 456 aaPredicted RBP3.6□□□□□ -1.83
CPNE3-208ENST00000614678 JOSD1Q15040 202 aaPredicted RBP3.6□□□□□ -1.83
CPNE3-208ENST00000614678 CD164L2Q6UWJ8 174 aa3.6□□□□□ -1.83
CPNE3-208ENST00000614678 GVQW2A0A096LPI5 108 aaPredicted RBP3.59□□□□□ -1.83
CPNE3-208ENST00000614678 IGIPA6NJ69 53 aa3.59□□□□□ -1.83
CPNE3-208ENST00000614678 CNBPP62633 177 aaKnown RBP3.59□□□□□ -1.83
CPNE3-208ENST00000614678 UNQ6190/PRO20217Q6UXQ8 127 aa3.59□□□□□ -1.83
CPNE3-208ENST00000614678 Q8N8P6 123 aa3.59□□□□□ -1.83
CPNE3-208ENST00000614678 DPH3Q96FX2 82 aa3.59□□□□□ -1.83
CPNE3-208ENST00000614678 HIST1H2BLQ99880 126 aa3.59□□□□□ -1.83
CPNE3-208ENST00000614678 MAP1LC3AQ9H492 121 aa3.59□□□□□ -1.83
CPNE3-208ENST00000614678 TNXBP22105 4242 aa3.59□□□□□ -1.83
CPNE3-208ENST00000614678 A0A1W2PNN7 141 aa3.59□□□□□ -1.83
CPNE3-208ENST00000614678 H7C423 109 aa3.59□□□□□ -1.83
CPNE3-208ENST00000614678 PPBPP02775 128 aa3.59□□□□□ -1.84
CPNE3-208ENST00000614678 SS18Q15532 418 aa3.59□□□□□ -1.84
CPNE3-208ENST00000614678 SPACA4Q8TDM5 124 aa3.59□□□□□ -1.84
CPNE3-208ENST00000614678 EIF4EBP3O60516 100 aaPredicted RBP3.59□□□□□ -1.84
CPNE3-208ENST00000614678 KRTAP7-1Q8IUC3 87 aa3.59□□□□□ -1.84
CPNE3-208ENST00000614678 OR10D4PQ8NGN7 298 aa3.59□□□□□ -1.84
CPNE3-208ENST00000614678 CSDC2Q9Y534 153 aaKnown RBP3.59□□□□□ -1.84
CPNE3-208ENST00000614678 RPL32P62910 135 aaKnown RBP3.58□□□□□ -1.84
CPNE3-208ENST00000614678 COX7A2LO14548 114 aa3.58□□□□□ -1.84
CPNE3-208ENST00000614678 MALP21145 153 aa3.58□□□□□ -1.84
CPNE3-208ENST00000614678 GAGE2BQ13066 116 aa3.58□□□□□ -1.84
CPNE3-208ENST00000614678 UBE2D1P51668 147 aa3.58□□□□□ -1.84
CPNE3-208ENST00000614678 KIAA0087Q14695 138 aa3.58□□□□□ -1.84
CPNE3-208ENST00000614678 STPG4Q8N801 248 aa3.58□□□□□ -1.84
CPNE3-208ENST00000614678 PPP1R17O96001 155 aa3.57□□□□□ -1.84
CPNE3-208ENST00000614678 COA6Q5JTJ3 125 aaKnown RBP3.57□□□□□ -1.84
CPNE3-208ENST00000614678 C18orf32Q8TCD1 76 aa3.57□□□□□ -1.84
CPNE3-208ENST00000614678 ORAOV1Q8WV07 137 aa3.57□□□□□ -1.84
CPNE3-208ENST00000614678 GNB1LQ9BYB4 327 aa3.57□□□□□ -1.84
CPNE3-208ENST00000614678 CDKN2A-AS1Q9UH64 79 aa3.57□□□□□ -1.84
CPNE3-208ENST00000614678 HMCN2Q8NDA2 5059 aa3.57□□□□□ -1.84
CPNE3-208ENST00000614678 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.57□□□□□ -1.84
CPNE3-208ENST00000614678 FAM229AH3BQW9 127 aa3.57□□□□□ -1.84
CPNE3-208ENST00000614678 NUPR1O60356 82 aa3.57□□□□□ -1.84
CPNE3-208ENST00000614678 SPAG11BQ08648 103 aa3.57□□□□□ -1.84
CPNE3-208ENST00000614678 CIRBPQ14011 172 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms