RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 MED12LQ86YW9 2145 aa4.99□□□□□ -1.61
CLCN3-211ENST00000613795 ZNF407Q9C0G0 2248 aa4.99□□□□□ -1.61
CLCN3-211ENST00000613795 PCNX3Q9H6A9 2034 aa4.98□□□□□ -1.61
CLCN3-211ENST00000613795 PROK1P58294 105 aa4.98□□□□□ -1.61
CLCN3-211ENST00000613795 CD164Q04900 197 aa4.98□□□□□ -1.61
CLCN3-211ENST00000613795 SYCNQ0VAF6 134 aa4.98□□□□□ -1.61
CLCN3-211ENST00000613795 C16orf95Q9H693 158 aa4.98□□□□□ -1.61
CLCN3-211ENST00000613795 MALRD1Q5VYJ5 2156 aa4.98□□□□□ -1.61
CLCN3-211ENST00000613795 NCOA6Q14686 2063 aaPredicted RBP4.98□□□□□ -1.61
CLCN3-211ENST00000613795 PCDH15Q96QU1 1955 aa4.97□□□□□ -1.61
CLCN3-211ENST00000613795 AKAP6Q13023 2319 aa4.97□□□□□ -1.61
CLCN3-211ENST00000613795 KIAA1549Q9HCM3 1950 aa4.96□□□□□ -1.61
CLCN3-211ENST00000613795 FAM19A4Q96LR4 140 aa4.96□□□□□ -1.61
CLCN3-211ENST00000613795 TANC2Q9HCD6 1990 aa4.96□□□□□ -1.62
CLCN3-211ENST00000613795 ZGRF1Q86YA3 2104 aa4.96□□□□□ -1.62
CLCN3-211ENST00000613795 LY6G6DO95868 133 aa4.96□□□□□ -1.62
CLCN3-211ENST00000613795 NHLRC4P0CG21 123 aaPredicted RBP4.96□□□□□ -1.62
CLCN3-211ENST00000613795 LINC01561Q8N1V8 128 aa4.96□□□□□ -1.62
CLCN3-211ENST00000613795 DYSFO75923 2080 aa4.96□□□□□ -1.62
CLCN3-211ENST00000613795 DOCK7Q96N67 2140 aa4.96□□□□□ -1.62
CLCN3-211ENST00000613795 FAM229AH3BQW9 127 aa4.96□□□□□ -1.62
CLCN3-211ENST00000613795 HIGD2AQ9BW72 106 aa4.96□□□□□ -1.62
CLCN3-211ENST00000613795 XAGE1AQ9HD64 81 aa4.96□□□□□ -1.62
CLCN3-211ENST00000613795 A0A087WZ39 114 aa4.96□□□□□ -1.62
CLCN3-211ENST00000613795 NANOS2P60321 138 aaKnown RBP4.95□□□□□ -1.62
CLCN3-211ENST00000613795 DOCK10Q96BY6 2186 aa4.95□□□□□ -1.62
CLCN3-211ENST00000613795 A0A0J9YWU9 116 aa4.95□□□□□ -1.62
CLCN3-211ENST00000613795 INAFM1C9JVW0 142 aa4.95□□□□□ -1.62
CLCN3-211ENST00000613795 DEFB4AO15263 64 aa4.95□□□□□ -1.62
CLCN3-211ENST00000613795 POLEQ07864 2286 aa4.95□□□□□ -1.62
CLCN3-211ENST00000613795 MED13Q9UHV7 2174 aa4.95□□□□□ -1.62
CLCN3-211ENST00000613795 LINC01006Q8NI28 216 aa4.95□□□□□ -1.62
CLCN3-211ENST00000613795 LINC00575Q6W349 94 aa4.95□□□□□ -1.62
CLCN3-211ENST00000613795 LINC00528Q8N1L1 170 aa4.95□□□□□ -1.62
CLCN3-211ENST00000613795 ABCA1O95477 2261 aa4.95□□□□□ -1.62
CLCN3-211ENST00000613795 TRIOBPQ9H2D6 2365 aa4.94□□□□□ -1.62
CLCN3-211ENST00000613795 COX6A2Q02221 97 aa4.94□□□□□ -1.62
CLCN3-211ENST00000613795 EML5Q05BV3 1969 aa4.94□□□□□ -1.62
CLCN3-211ENST00000613795 NUPR2A6NF83 97 aa4.94□□□□□ -1.62
CLCN3-211ENST00000613795 H0Y9P7 68 aa4.94□□□□□ -1.62
CLCN3-211ENST00000613795 J3QL48 77 aa4.94□□□□□ -1.62
CLCN3-211ENST00000613795 ERC2-IT1O76042 136 aa4.94□□□□□ -1.62
CLCN3-211ENST00000613795 WISP2O76076 250 aa4.94□□□□□ -1.62
CLCN3-211ENST00000613795 C1orf137Q5JT78 98 aa4.94□□□□□ -1.62
CLCN3-211ENST00000613795 CEP290O15078 2479 aa4.94□□□□□ -1.62
CLCN3-211ENST00000613795 DOPEY2Q9Y3R5 2298 aa4.94□□□□□ -1.62
CLCN3-211ENST00000613795 C10orf25Q5T742 122 aa4.94□□□□□ -1.62
CLCN3-211ENST00000613795 LRP4O75096 1905 aa4.93□□□□□ -1.62
CLCN3-211ENST00000613795 A0A1B0GW54 56 aa4.93□□□□□ -1.62
CLCN3-211ENST00000613795 BEAN1Q3B7T3 259 aa4.93□□□□□ -1.62
CLCN3-211ENST00000613795 HCG22E2RYF7 251 aa4.93□□□□□ -1.62
CLCN3-211ENST00000613795 PLA2G2AP14555 144 aa4.93□□□□□ -1.62
CLCN3-211ENST00000613795 IGLV5-39A0A0G2JS06 123 aa4.92□□□□□ -1.62
CLCN3-211ENST00000613795 FHL2Q14192 279 aa4.92□□□□□ -1.62
CLCN3-211ENST00000613795 SPTA1P02549 2419 aa4.92□□□□□ -1.62
CLCN3-211ENST00000613795 H3BPC8 53 aa4.92□□□□□ -1.62
CLCN3-211ENST00000613795 KPRPQ5T749 579 aaPredicted RBP4.92□□□□□ -1.62
CLCN3-211ENST00000613795 LINC00337Q8N6G1 96 aa4.92□□□□□ -1.62
CLCN3-211ENST00000613795 HCFC1P51610 2035 aa4.92□□□□□ -1.62
CLCN3-211ENST00000613795 CEP192Q8TEP8 1941 aa4.91□□□□□ -1.62
CLCN3-211ENST00000613795 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.91□□□□□ -1.62
CLCN3-211ENST00000613795 BBC3Q96PG8 261 aaPredicted RBP4.91□□□□□ -1.62
CLCN3-211ENST00000613795 PKDREJQ9NTG1 2253 aa4.91□□□□□ -1.62
CLCN3-211ENST00000613795 LOC110117498A0A087WWA1 95 aa4.91□□□□□ -1.62
CLCN3-211ENST00000613795 IGKV2-24A0A0C4DH68 120 aa4.91□□□□□ -1.62
CLCN3-211ENST00000613795 CYP4F30PQ9H0H9 118 aa4.91□□□□□ -1.62
CLCN3-211ENST00000613795 EGFEM1PQ0D2K5 195 aa4.91□□□□□ -1.62
CLCN3-211ENST00000613795 EIF4EBP3O60516 100 aaPredicted RBP4.91□□□□□ -1.62
CLCN3-211ENST00000613795 ROS1P08922 2347 aa4.91□□□□□ -1.62
CLCN3-211ENST00000613795 FHL3Q13643 280 aa4.9□□□□□ -1.62
CLCN3-211ENST00000613795 LINC00336Q6ZUF6 198 aa4.9□□□□□ -1.62
CLCN3-211ENST00000613795 LINC00482Q8N8I6 264 aa4.9□□□□□ -1.62
CLCN3-211ENST00000613795 IGKV2-28A0A075B6P5 120 aa4.9□□□□□ -1.62
CLCN3-211ENST00000613795 IGKV2D-28P01615 120 aa4.9□□□□□ -1.62
CLCN3-211ENST00000613795 SPTBN1Q01082 2364 aaKnown RBP4.9□□□□□ -1.62
CLCN3-211ENST00000613795 CYSRT1A8MQ03 144 aa4.9□□□□□ -1.63
CLCN3-211ENST00000613795 ZDBF2Q9HCK1 2354 aa4.9□□□□□ -1.63
CLCN3-211ENST00000613795 IGLV1-51P01701 117 aa4.89□□□□□ -1.63
CLCN3-211ENST00000613795 KIF25-AS1Q9Y6Z4 181 aa4.89□□□□□ -1.63
CLCN3-211ENST00000613795 APC2O95996 2303 aa4.89□□□□□ -1.63
CLCN3-211ENST00000613795 C8orf87E5RJ46 101 aa4.89□□□□□ -1.63
CLCN3-211ENST00000613795 SPAG11AQ6PDA7 123 aa4.89□□□□□ -1.63
CLCN3-211ENST00000613795 KLKP1Q107X0 134 aa4.89□□□□□ -1.63
CLCN3-211ENST00000613795 SMIM29Q86T20 159 aa4.89□□□□□ -1.63
CLCN3-211ENST00000613795 SMCR5Q8TEV8 140 aa4.89□□□□□ -1.63
CLCN3-211ENST00000613795 PCNX2A6NKB5 2137 aa4.88□□□□□ -1.63
CLCN3-211ENST00000613795 SPATA3Q8NHX4 192 aa4.88□□□□□ -1.63
CLCN3-211ENST00000613795 FREM1Q5H8C1 2179 aa4.88□□□□□ -1.63
CLCN3-211ENST00000613795 CACNA1EQ15878 2313 aa4.88□□□□□ -1.63
CLCN3-211ENST00000613795 IGLV5-45A0A087WSX0 123 aa4.88□□□□□ -1.63
CLCN3-211ENST00000613795 C2orf48Q96LS8 159 aa4.88□□□□□ -1.63
CLCN3-211ENST00000613795 Q6ZQT0 140 aa4.88□□□□□ -1.63
CLCN3-211ENST00000613795 C1orf64Q8NEQ6 169 aa4.88□□□□□ -1.63
CLCN3-211ENST00000613795 TNCP24821 2201 aa4.87□□□□□ -1.63
CLCN3-211ENST00000613795 CADP27708 2225 aa4.87□□□□□ -1.63
CLCN3-211ENST00000613795 FAM218AQ96MZ4 157 aa4.87□□□□□ -1.63
CLCN3-211ENST00000613795 Q8N2B8 174 aa4.87□□□□□ -1.63
CLCN3-211ENST00000613795 A0A096LNI7 61 aa4.87□□□□□ -1.63
CLCN3-211ENST00000613795 LOC100131303A0A0U1RQF7 123 aa4.87□□□□□ -1.63
CLCN3-211ENST00000613795 A0A1B0GUV1 79 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms