RNA–Protein interactions for RNA: ENST00000613177.1

TARDBP-214, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-214ENST00000613177 BLCAPP62952 87 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 MRPS36P82909 103 aaKnown RBP0.68□□□□□ -2.3
TARDBP-214ENST00000613177 NEDD8Q15843 81 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 DEFB136Q30KP8 78 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 RPL39P5Q59GN2 51 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 IZUMO2Q6UXV1 221 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 SLC25A26Q70HW3 274 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 C6orf201Q7Z4U5 140 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 Q8N6K4 173 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 ACBD7Q8N6N7 88 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.68□□□□□ -2.3
TARDBP-214ENST00000613177 OR5A2Q8NGI9 324 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 OR10AG1Q8NH19 301 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 OR5AK2Q8NH90 309 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 SPTSSAQ969W0 71 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 CEP295Q9C0D2 2601 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 FAIMQ9NVQ4 179 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 LSM2Q9Y333 95 aaKnown RBP0.68□□□□□ -2.3
TARDBP-214ENST00000613177 R4GMQ9 66 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 WNK2Q9Y3S1 2297 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 F8P00451 2351 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 TEX15Q9BXT5 2789 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 HECTD1Q9ULT8 2610 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 PLCE1Q9P212 2302 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 ITPR2Q14571 2701 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 USP9YO00507 2555 aaPredicted RBP0.67□□□□□ -2.3
TARDBP-214ENST00000613177 ACANP16112 2415 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 SVEP1Q4LDE5 3571 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 ANKRD17O75179 2603 aaKnown RBP0.67□□□□□ -2.3
TARDBP-214ENST00000613177 LOC107984156A0A0G2JMH3 177 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 TRBV27A0A0K0K1C4 114 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 A0A1B0GW64 132 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 TMEM14DPA8MWL7 114 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 G3V318 75 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 TSTD3H0UI37 97 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 IFNGP01579 166 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 PRH1P02810 166 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 SCTP09683 121 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 RBP2P50120 134 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 FOXA3P55318 350 aaPredicted RBP0.67□□□□□ -2.3
TARDBP-214ENST00000613177 SNRPGP62308 76 aaKnown RBP0.67□□□□□ -2.3
TARDBP-214ENST00000613177 LSM3P62310 102 aaKnown RBP0.67□□□□□ -2.3
TARDBP-214ENST00000613177 QRFPP83859 136 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 SPCS2Q15005 226 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 MORN2Q502X0 79 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 TMEM244Q5VVB8 128 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 RPL13AP3Q6NVV1 102 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 GLIPR1L1Q6UWM5 242 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 TOMM20LQ6UXN7 152 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 CASC2Q6XLA1 102 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 IDO2Q6ZQW0 420 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 SNX29P2Q8IUI4 249 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 ARL17AQ8IVW1 177 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 C8orf59Q8N0T1 100 aaPredicted RBP0.67□□□□□ -2.3
TARDBP-214ENST00000613177 ARL11Q969Q4 196 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 FAM103A1Q9BTL3 118 aaKnown RBP0.67□□□□□ -2.3
TARDBP-214ENST00000613177 LPAR5Q9H1C0 372 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 KAAG1Q9UBP8 84 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 MPC1Q9Y5U8 109 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 PTPN13Q12923 2485 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 DOPEY1Q5JWR5 2465 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 FLNCQ14315 2725 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 POLQO75417 2590 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 SETXQ7Z333 2677 aaKnown RBP0.67□□□□□ -2.3
TARDBP-214ENST00000613177 MYO9AB2RTY4 2548 aa0.67□□□□□ -2.3
TARDBP-214ENST00000613177 CSPG4Q6UVK1 2322 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 ITPR3Q14573 2671 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 SPG11Q96JI7 2443 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 TRBV7-6A0A0J9YX20 115 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 EFCAB10A6NFE3 127 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 H3BMG7 143 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 K7EIL1 84 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 M0R1W7 72 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 DEGS1O15121 323 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 SULT1C4O75897 302 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 TRACP01848 142 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 NBEAP1P0C6P0 100 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 SAA2P0DJI9 122 aaPredicted RBP0.66□□□□□ -2.3
TARDBP-214ENST00000613177 TPT1P13693 172 aaKnown RBP0.66□□□□□ -2.3
TARDBP-214ENST00000613177 DEFB1P60022 68 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 NCS1P62166 190 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 HMGN3Q15651 99 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 SMIM21Q3B7S5 101 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 HSD17B12Q53GQ0 312 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 SPINK9Q5DT21 86 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 HEPN1Q6WQI6 88 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 SBSPONQ8IVN8 264 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 C5orf56Q8N8D9 126 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 PP6455Q8WZ26 134 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 ARHGAP5-AS1Q96IT6 56 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 NABP2Q9BQ15 211 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 ATG5Q9H1Y0 275 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 MRPL36Q9P0J6 103 aaKnown RBP0.66□□□□□ -2.3
TARDBP-214ENST00000613177 LINC00312Q9Y6C7 94 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 HYDINQ4G0P3 5121 aa0.66□□□□□ -2.3
TARDBP-214ENST00000613177 SPTAN1Q13813 2472 aaKnown RBP0.65□□□□□ -2.3
TARDBP-214ENST00000613177 SONP18583 2426 aaKnown RBP0.65□□□□□ -2.31
TARDBP-214ENST00000613177 CREBBPQ92793 2442 aa0.65□□□□□ -2.31
TARDBP-214ENST00000613177 TEP1Q99973 2627 aaKnown RBP0.65□□□□□ -2.31
TARDBP-214ENST00000613177 TMEM30CPA0ZSE6 113 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms