RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 MAP1LC3AQ9H492 121 aa4.57□□□□□ -1.68
PTCHD3P1-201ENST00000612350 NXT2Q9NPJ8 142 aaKnown RBP4.57□□□□□ -1.68
PTCHD3P1-201ENST00000612350 TGIF2-C20orf24A0A0A6YYL0 155 aa4.56□□□□□ -1.68
PTCHD3P1-201ENST00000612350 CRPP02741 224 aa4.56□□□□□ -1.68
PTCHD3P1-201ENST00000612350 ANGP03950 147 aaKnown RBP4.56□□□□□ -1.68
PTCHD3P1-201ENST00000612350 RBX1P62877 108 aa4.56□□□□□ -1.68
PTCHD3P1-201ENST00000612350 GAGE6Q13070 117 aa4.56□□□□□ -1.68
PTCHD3P1-201ENST00000612350 MIAQ16674 131 aa4.56□□□□□ -1.68
PTCHD3P1-201ENST00000612350 AMMECR1LQ6DCA0 310 aa4.56□□□□□ -1.68
PTCHD3P1-201ENST00000612350 MRPL52Q86TS9 123 aaKnown RBP4.56□□□□□ -1.68
PTCHD3P1-201ENST00000612350 Q8N8P6 123 aa4.56□□□□□ -1.68
PTCHD3P1-201ENST00000612350 TMEM101Q96IK0 257 aa4.56□□□□□ -1.68
PTCHD3P1-201ENST00000612350 YPEL4Q96NS1 127 aa4.56□□□□□ -1.68
PTCHD3P1-201ENST00000612350 PRR34Q9NV39 138 aa4.56□□□□□ -1.68
PTCHD3P1-201ENST00000612350 KLK12Q9UKR0 248 aa4.56□□□□□ -1.68
PTCHD3P1-201ENST00000612350 CSDC2Q9Y534 153 aaKnown RBP4.56□□□□□ -1.68
PTCHD3P1-201ENST00000612350 TRAPPC1Q9Y5R8 145 aa4.56□□□□□ -1.68
PTCHD3P1-201ENST00000612350 TRAV8-4A0A0B4J246 113 aa4.55□□□□□ -1.68
PTCHD3P1-201ENST00000612350 LINC01549A6NIU2 74 aa4.55□□□□□ -1.68
PTCHD3P1-201ENST00000612350 COLCA2A8K830 154 aa4.55□□□□□ -1.68
PTCHD3P1-201ENST00000612350 PANO1I0J062 215 aa4.55□□□□□ -1.68
PTCHD3P1-201ENST00000612350 FGF6P10767 208 aa4.55□□□□□ -1.68
PTCHD3P1-201ENST00000612350 FABP9Q0Z7S8 132 aa4.55□□□□□ -1.68
PTCHD3P1-201ENST00000612350 ORMDL2Q53FV1 153 aa4.55□□□□□ -1.68
PTCHD3P1-201ENST00000612350 C20orf203Q8NBC4 194 aa4.55□□□□□ -1.68
PTCHD3P1-201ENST00000612350 TIMM21Q9BVV7 248 aa4.55□□□□□ -1.68
PTCHD3P1-201ENST00000612350 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.54□□□□□ -1.68
PTCHD3P1-201ENST00000612350 IGKV2-29A2NJV5 120 aaPredicted RBP4.54□□□□□ -1.68
PTCHD3P1-201ENST00000612350 CCL25O15444 150 aa4.54□□□□□ -1.68
PTCHD3P1-201ENST00000612350 NPSP0C0P6 89 aa4.54□□□□□ -1.68
PTCHD3P1-201ENST00000612350 REG3AQ06141 175 aa4.54□□□□□ -1.68
PTCHD3P1-201ENST00000612350 C21orf62-AS1Q17RA5 79 aa4.54□□□□□ -1.68
PTCHD3P1-201ENST00000612350 DGAT2L7PQ6IED9 249 aa4.54□□□□□ -1.68
PTCHD3P1-201ENST00000612350 RNASEKQ6P5S7 137 aaKnown RBP4.54□□□□□ -1.68
PTCHD3P1-201ENST00000612350 ENHOQ6UWT2 76 aa4.54□□□□□ -1.68
PTCHD3P1-201ENST00000612350 LINC00269Q8N2A0 174 aa4.54□□□□□ -1.68
PTCHD3P1-201ENST00000612350 OR5A1Q8NGJ0 315 aa4.54□□□□□ -1.68
PTCHD3P1-201ENST00000612350 UBE2WQ96B02 151 aa4.54□□□□□ -1.68
PTCHD3P1-201ENST00000612350 ALKBH7Q9BT30 221 aaPredicted RBP4.54□□□□□ -1.68
PTCHD3P1-201ENST00000612350 C1orf43Q9BWL3 253 aa4.54□□□□□ -1.68
PTCHD3P1-201ENST00000612350 KRTAP3-1Q9BYR8 98 aa4.54□□□□□ -1.68
PTCHD3P1-201ENST00000612350 SPANXA1Q9NS26 97 aa4.54□□□□□ -1.68
PTCHD3P1-201ENST00000612350 IGLV4-60A0A075B6I1 120 aa4.53□□□□□ -1.68
PTCHD3P1-201ENST00000612350 LOC389332A0A1B0GUA5 103 aa4.53□□□□□ -1.68
PTCHD3P1-201ENST00000612350 LINC01546A6NGU7 62 aa4.53□□□□□ -1.68
PTCHD3P1-201ENST00000612350 KIAA1644Q3SXP7 199 aa4.53□□□□□ -1.68
PTCHD3P1-201ENST00000612350 PRSS3P2Q8NHM4 247 aa4.53□□□□□ -1.68
PTCHD3P1-201ENST00000612350 CDC42SE2Q9NRR3 84 aa4.53□□□□□ -1.68
PTCHD3P1-201ENST00000612350 UBE2D4Q9Y2X8 147 aa4.53□□□□□ -1.68
PTCHD3P1-201ENST00000612350 PYGO1Q9Y3Y4 419 aa4.53□□□□□ -1.68
PTCHD3P1-201ENST00000612350 IGKV2D-24A0A075B6R9 120 aa4.52□□□□□ -1.69
PTCHD3P1-201ENST00000612350 IFI27P40305 119 aaPredicted RBP4.52□□□□□ -1.69
PTCHD3P1-201ENST00000612350 MRPS36P82909 103 aaKnown RBP4.52□□□□□ -1.69
PTCHD3P1-201ENST00000612350 ZNF664Q8N3J9 261 aa4.52□□□□□ -1.69
PTCHD3P1-201ENST00000612350 CYSLTR1Q9Y271 337 aa4.52□□□□□ -1.69
PTCHD3P1-201ENST00000612350 C14orf177Q52M58 125 aa4.51□□□□□ -1.69
PTCHD3P1-201ENST00000612350 PAPPA-AS1Q5QFB9 102 aa4.51□□□□□ -1.69
PTCHD3P1-201ENST00000612350 C2orf66Q6UXQ4 117 aa4.51□□□□□ -1.69
PTCHD3P1-201ENST00000612350 FA2HQ7L5A8 372 aa4.51□□□□□ -1.69
PTCHD3P1-201ENST00000612350 LINC00614P0C842 121 aa4.5□□□□□ -1.69
PTCHD3P1-201ENST00000612350 S100A2P29034 98 aa4.5□□□□□ -1.69
PTCHD3P1-201ENST00000612350 CIRBPQ14011 172 aaKnown RBP4.5□□□□□ -1.69
PTCHD3P1-201ENST00000612350 SS18Q15532 418 aa4.5□□□□□ -1.69
PTCHD3P1-201ENST00000612350 C18orf32Q8TCD1 76 aa4.5□□□□□ -1.69
PTCHD3P1-201ENST00000612350 TOMM6Q96B49 74 aa4.5□□□□□ -1.69
PTCHD3P1-201ENST00000612350 TIMM17AQ99595 171 aa4.5□□□□□ -1.69
PTCHD3P1-201ENST00000612350 LINC00959A0A1B0GUT2 108 aa4.49□□□□□ -1.69
PTCHD3P1-201ENST00000612350 C9orf118A6NHY6 69 aa4.49□□□□□ -1.69
PTCHD3P1-201ENST00000612350 TRGC2P03986 189 aa4.49□□□□□ -1.69
PTCHD3P1-201ENST00000612350 AKR1D1P51857 326 aa4.49□□□□□ -1.69
PTCHD3P1-201ENST00000612350 RPL39P62891 51 aaKnown RBP4.49□□□□□ -1.69
PTCHD3P1-201ENST00000612350 KRTAP26-1Q6PEX3 210 aa4.49□□□□□ -1.69
PTCHD3P1-201ENST00000612350 CLPSL2Q6UWE3 100 aa4.49□□□□□ -1.69
PTCHD3P1-201ENST00000612350 CD164L2Q6UWJ8 174 aa4.49□□□□□ -1.69
PTCHD3P1-201ENST00000612350 Q6ZN92 141 aa4.49□□□□□ -1.69
PTCHD3P1-201ENST00000612350 SDIM1Q6ZPB5 146 aa4.49□□□□□ -1.69
PTCHD3P1-201ENST00000612350 ERASQ7Z444 233 aa4.49□□□□□ -1.69
PTCHD3P1-201ENST00000612350 C9orf163Q8N9P6 203 aa4.49□□□□□ -1.69
PTCHD3P1-201ENST00000612350 CHCHD1Q96BP2 118 aaKnown RBP4.49□□□□□ -1.69
PTCHD3P1-201ENST00000612350 TMEM141Q96I45 108 aa4.49□□□□□ -1.69
PTCHD3P1-201ENST00000612350 IGKV3OR2-268A0A0C4DH90 116 aa4.48□□□□□ -1.69
PTCHD3P1-201ENST00000612350 LOC105371267A0A1B0GV96 52 aa4.48□□□□□ -1.69
PTCHD3P1-201ENST00000612350 IGIPA6NJ69 53 aa4.48□□□□□ -1.69
PTCHD3P1-201ENST00000612350 NDUFA6P56556 154 aa4.48□□□□□ -1.69
PTCHD3P1-201ENST00000612350 TEX43Q6ZNM6 134 aa4.48□□□□□ -1.69
PTCHD3P1-201ENST00000612350 Q6ZUT4 128 aa4.48□□□□□ -1.69
PTCHD3P1-201ENST00000612350 CHCHD10Q8WYQ3 142 aaPredicted RBP4.48□□□□□ -1.69
PTCHD3P1-201ENST00000612350 C2orf88Q9BSF0 95 aa4.48□□□□□ -1.69
PTCHD3P1-201ENST00000612350 VCX2Q9H322 139 aa4.48□□□□□ -1.69
PTCHD3P1-201ENST00000612350 IGLV10-54A0A075B6I4 117 aa4.47□□□□□ -1.69
PTCHD3P1-201ENST00000612350 IGLV4-3A0A075B6K6 122 aa4.47□□□□□ -1.69
PTCHD3P1-201ENST00000612350 TRAV13-1A0A0B4J241 112 aa4.47□□□□□ -1.69
PTCHD3P1-201ENST00000612350 GAGE12HA6NDE8 117 aa4.47□□□□□ -1.69
PTCHD3P1-201ENST00000612350 HBDP02042 147 aa4.47□□□□□ -1.69
PTCHD3P1-201ENST00000612350 SEC11AP67812 179 aa4.47□□□□□ -1.69
PTCHD3P1-201ENST00000612350 REG3GQ6UW15 175 aa4.47□□□□□ -1.69
PTCHD3P1-201ENST00000612350 FAM104AQ969W3 186 aa4.47□□□□□ -1.69
PTCHD3P1-201ENST00000612350 SCGB3A1Q96QR1 104 aa4.47□□□□□ -1.69
PTCHD3P1-201ENST00000612350 AMELXQ99217 191 aa4.47□□□□□ -1.69
PTCHD3P1-201ENST00000612350 A0A087WYN8 130 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms